Array 1 106319-105931 **** Predicted by CRISPRDetect 2.4 *** >NZ_UFNO01000012.1 Acinetobacter baumannii strain 4300STDY7045852, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 106318 28 100.0 32 ............................ TGATTGCGGTGATGAGACCATTTTGTATTCTC 106258 28 100.0 32 ............................ TGAATCGAACTTATCTAGGGCATGGCTTTATC 106198 28 100.0 32 ............................ TGAATCGAACTTATCTAGGGCATGGCTTTATC 106138 28 100.0 32 ............................ CTCCTCATCAAATAGGTCGGGCCAACTGGAAT 106078 28 100.0 32 ............................ TCCGCAAGCGTGGCTTCACTGTTAATTTTCGT 106018 28 100.0 32 ............................ AGTGGAAGAAGTCGGGCGAGATCATGATTTTG 105958 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 7 28 100.0 32 GTTCGTCATCGCCCAAATGATTTAGAAA # Left flank : GACGTTGGGCTAAAACGTTATACAAACAACTTGCTAAAGGCTTTGGAGTTGAGTTTATTCGGGATGAAGGAAAAAATTCTCACGACACTATTGCTGATATAGCCAACAGCTACCTCGATCATGGAAACTATATTGCCTATGGCTATGCGGCAGTTGCTTTAAATGGAATGGGAATTAGCTTTGCCTTACCTATTTTACACGGTAAAACACGTCGTGGAGGTCTAGTCTTTGACCTCGCTGATCTAGTTAAAGATGCTTTTGTAATGCCAATTGCTTTTACATGTGCAGCAAAAGGATTAAATCAGAAAGAATTCCGAATGCAGCTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGACATATGCAGTAAAATCAAATAAAATCATACATTTAATCCAAGTACCTCATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTAAACTTAACTTT # Right flank : TCTGAATCTTAAAAAAATCCAAAAAATTATAGTTCAGGACTTTTCATTAATCTTGGTGGGCTTGATATCTCCCCTAATAGCCCATTGTAGAATCGATCTCTCTAATTAGGAGCGTGGTAAATGTTTTGACTTAGTAGGCCCATGCAAAAACTGCCCTTTCCGCAATGATAAGCTCGAACAAAAAGGCTGGTTAGGCTCTGCCCGTGCTCAGGATATTTTCGACAATTTAAAAGATGGTGGCTTCTTCCCTTGTCATAAAACCAATGATTATGTCCGGGATGAGAAAGACTATAGCGAATATGACGATGAATGTGAAAACGAACCAAAGTTTAAGATTCAGGGTCAACATCAGTTCTGTGCCGGTGCTTTAATTCTTATGGAGAAAACAGGTGCCGCAGACAGATCTCAGGTTATCCAAATTGCGGAACGATTAAGATTGTACAAGAAGGATAAACTAAGAATTGCCACCTCCTCTGTTTTCAATTCAGAGCTTGAGTTTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTCATCGCCCAAATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.71%AT] # Reference repeat match prediction: R [matched GTTCGTCATCGCCCAGATGATTTAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.40,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [71.7-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.77 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 111407-114856 **** Predicted by CRISPRDetect 2.4 *** >NZ_UFNO01000012.1 Acinetobacter baumannii strain 4300STDY7045852, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 111407 28 100.0 32 ............................ ATTAAGCGTCCAACACCGCCAGCGTGTCCGCA 111467 28 100.0 32 ............................ AATCCGAAGAACGCGCATACCATGAAGCGTTT 111527 28 100.0 32 ............................ AGATTTCACCCGAAGAAATTGCAGCACGAAAG 111587 28 100.0 32 ............................ GTTGCACGCGGGACGCACACATATTCGGACAG 111647 28 100.0 32 ............................ CAGCCGAACGAGAAATCGAAAAGGCGCGCAAC 111707 28 100.0 32 ............................ TTCTTGCCTATGTTGCAAGGGTTACCAACTAA 111767 28 100.0 32 ............................ GAAAATGGTATGGGGAGTACCCACCAAAATGG 111827 28 100.0 32 ............................ TATGGCGGTTTTTGTTTGTCGATGAGAAGATA 111887 28 100.0 32 ............................ TCTATGAGAAATTAAGAAAGCTGAAAATGCTA 111947 28 100.0 32 ............................ AACACGTTCGAAATATTTCCATTCAACAAATT 112007 28 100.0 32 ............................ AATTCATGTGGGCGATGTTGTCCCTCGTATGA 112067 28 100.0 32 ............................ TGAATGTTAAAGGGGAGCTGAAAGCATGATCG 112127 28 100.0 32 ............................ CAAGACCCCGCCTTGATTAGCGGTGCGGAGGC 112187 28 100.0 32 ............................ TTGTAATTGAGAGTAGCTAACAAAATCAGACT 112247 28 100.0 32 ............................ TTGTGCAAAACAGACAAACATTTGTAAGCGCA 112307 28 100.0 32 ............................ TGAGAAGATTAAACACAGCAATGTGATGATCG 112367 28 100.0 32 ............................ AATCTGTTGACCTTGAAAAACTGCAATATATT 112427 28 100.0 32 ............................ ATTGTGGTGTAGCAGGTTGGATTCGAACCAAC 112487 28 100.0 32 ............................ AATAGTAGATATATTGCTTAATGATACATCGC 112547 28 100.0 32 ............................ ATAACCTAAAGGCTCGAAGGGGCGGTCTGCAA 112607 28 100.0 32 ............................ AACCATCACGACACGGGCATTACCTGCTGCCC 112667 28 100.0 32 ............................ TCAGCTCCCCATTCGCTTTCACCCAACTTAAT 112727 28 100.0 32 ............................ TTATCCTTTTAAGATGCTTTGCGAAAAATACT 112787 28 100.0 32 ............................ GCATAGTTTTGCGCCCCGCACACAACAAAACC 112847 28 100.0 32 ............................ TCAAAATGAAGATGAACAGGCCAAGGCGATTG 112907 28 100.0 32 ............................ TGGATACTGTGATGAAACAAGAGAAGCCTACC 112967 28 100.0 32 ............................ TTGCAAATCTGGTACGACTCATTGGCAAAGTT 113027 28 100.0 32 ............................ AAGAAAAGAATTTCATGTTTGAAATGACGGCA 113087 28 100.0 32 ............................ AAGAATCGCACCTAGTGCCACATTAATTAAAT 113147 28 100.0 32 ............................ TAAGTATTTTGGAGAGTAGGCCAATGGGTTAG 113207 28 100.0 32 ............................ AGAGCAGTTTATTCGTGAGTTTGGGGTGGAGA 113267 28 100.0 32 ............................ TTTGATAAGAAGCAAAACTTTTAGTCTTTCCA 113327 28 100.0 32 ............................ TTCAAAATCACTTAAATGTTGCTCTGGAATGA 113387 28 100.0 33 ............................ AAATTGCGCCCATTTCAGCAAACATGTAACCCT 113448 28 100.0 32 ............................ CTCTTCAAAATACCACCCAACCCCGTGCGACT 113508 28 100.0 32 ............................ TTTCTGCATCCACACAACAAACATAAAGACTA 113568 28 100.0 32 ............................ TGATTGGTGTATTGAAGCAAGCGACTAGTTAA 113628 28 100.0 32 ............................ TGTAGTCTCAATCTTGAACCGCTGGCACACAC 113688 28 100.0 32 ............................ ATAGAAGAATCGGCAAGCGTATTCATAAACTC 113748 28 100.0 32 ............................ ATTATTGGTCAAAGATTGACTTAATATAATCA 113808 28 100.0 32 ............................ ATAGTAGTAATCGTTTTCAATGTGCTTGCGGA 113868 28 100.0 32 ............................ ATGAGTGAGTTTAAAGTCGGGGATAAGGTTGT 113928 28 100.0 32 ............................ TTAGCTCACATAATGAAAATTTGTCACTTTGA 113988 28 100.0 33 ............................ TTGGCCGTGAGTTCCCGACCGCGATTGGCGACA 114049 28 100.0 32 ............................ AACGTCGTTCGGTTACTTACATGAACGACCGC 114109 28 100.0 32 ............................ AGAAGCGCGTTAACATTCTTATGGAGGAGTTT 114169 28 100.0 32 ............................ CGCTGATTTAGATAAGAACGGGAATGTTCTTA 114229 28 100.0 32 ............................ ACACCGACACGCGTTTGAGCTAGCGTAACATC 114289 28 100.0 32 ............................ TTATATCGCTAAGATGCTTAACCAGCCACAAA 114349 28 100.0 32 ............................ TGCGCGAAATGGTGCGAAATGGCGGCATGTTT 114409 28 100.0 32 ............................ GGTTGTACAGGTCAATGGTGCAACGCCCGTTC 114469 28 100.0 32 ............................ ATTCAGTAGGGAAAGCTTCGCCGTATGGATTC 114529 28 100.0 32 ............................ AGACGCTACACGATCCTTATCTAAAGCCAATT 114589 28 100.0 32 ............................ TAGCGGAAAAAGTCTATGAGATCATGAAGGCC 114649 28 100.0 32 ............................ ATGAAGTGTTTAATTGGTACTGTGGCGAACCT 114709 28 100.0 32 ............................ CTTATGTCTCTCAATGGTGGTATTGATGATGT 114769 28 100.0 32 ............................ GAACCAAGATCAATCGTAGTGTTCGGGTTAAT 114829 28 96.4 0 ...........................G | ========== ====== ====== ====== ============================ ================================= ================== 58 28 99.9 32 GTTGTTCATCGCATAGATGATTTAGAAA # Left flank : CTTTAAAAATAGAGGCCGTTTTACCTGCATTTGCCTGATAATCAGTTGGAATAAGGAAGTCTTCATTTAATAAAGTTCGAGCACTAAGATAAGGTAAATCAAGTGCTTGTTGCTTACTTAATCGAATTCCACCTTTTTCAATATTGGAATTAATCGTCTTTAAACTAAAGTGCACCGATTCTTCTAAAGCGTTTATAAAAATATCAGTTTGTGGTTCAGGCATTATCTTCCCCGTTTTTGTTATCTAGCCAATTTTTAACACATTATTTGGAAAATGAAAGTATTGAAGGAGAGAGTTGCAACAAATTAAGTCGTAAAGACAATTGGATGAAAATATTATATGCTTCATAAATTTAGCCTCAGAAGATTAGGTTATATTTTTTAAAAATGGAAAAATTAATATAATTCAATAGATTATATTGTTCTTCTATTTTGAAGGTTTTTAATTCATTAAAACTTTATATTATTGTTTTTAAGAGTTTTGTTTTTACTTAGCTCTA # Right flank : AGTTTCTTCCAAAATTTAAGACGATGTATTTTGTCGTTAAAAGGTCGTATTAAACTGATTAAAGCTAGAGGTGGTCCCACTTGTTTGAACAACTAAAAGCGTATTTATAAGTGATATTCCGCTCTAGTTAAGCCACCTTGTTTTGTTGGGGTAGCTGATCATAGTAAAACTCATTTGGTGTCATTTTGTCTAGACTCGAATGAGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTGTTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [83.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //