Array 1 1050508-1050136 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACONZ010000001.1 Anaerofilum sp. BX8 BX8_ctg0001, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 1050507 33 100.0 35 ................................. TGTGTTTTTGGTAAGCGGTGATGTTGGCCAAATTG 1050439 33 100.0 35 ................................. ACATAATCAAAACAGCAGACTATTACCGCTTTGGA 1050371 33 100.0 35 ................................. CATCAGCCCATCAGCTCCCTGGTCGTATTGTCCAT 1050303 33 100.0 35 ................................. CGAATCACTCCGCGCGGGCTGTTGTTGTCCAGTAC 1050235 33 100.0 34 ................................. TAGTCATCACCACCTGTGAAATCTTCCCGTAGGT 1050168 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= =================================== ================== 6 33 100.0 35 GTCGCTGCCCGTGAGGGCAGCGTGGATTGAAAC # Left flank : ACATCGCCATGTGCGGCGACCGGGCCATCGCGGAGAGCTTTGGCTGCCGCCTGGAACTGCCGGAGACCATTGCAAACGGGGCGGACCGCTGTGCGCTGCGCTTTGTGCGCGGCACAGGCGAAAAGACAGAGGAGCAGGGATGAGGCAGGCCCCGGCAGAAGAACGCTTTGCCCACCGCCCGAAAGATGAAATGGAGCGCACCGGGGGAAACGGCTGCACCGGGCGGTAAAAAGGGCGAGGAGCGCGGACTGCGCAGGAAACAGCGGGCGGTTTTGCCGTCTGGGACAGGGCCACTGTGTGATTTCAGCACAAGCTGCCGGGCCAATTCGGTGCGAAAGGGAAGTGTACATCCAATAGCCGGGAGGTTCGCACTCCCCAAAGGAACCTTTTTATGCGCAGAACAGGAGAAAAGAACGGGATTTATACTGTTGGATCGGAAAAAATAGAAAAAATTTAGTGAATGTGTCCAAGCAGGAAAGAAAAAAATGTGCATATTCGCT # Right flank : GCGTCCAGGCTGCGCCGGCTTTTGACCGATGTGGCAACCGCAGCCAGACCCGTGGGGCCCTGACAGGTCGCCTCTGCCCGCGGTGGTCTGGACGGGTCTGATGCAGCGCCGGCGTTTTTTGCGCCGGCGCATCTATTTTTGCGGCCGCGCTGGGCCAAACTCGCGGCAGCGGCTTTGCGAAGCTCGCACAGGCGGCGCTTCAGCCGCCTGCCGCTCCCCGCTTCCCGGAGCAGATGCGCCCAAAGTGGGGGAACCGCATCCCCGGCATCCTGACCGCGGCGCAGGATTTTTCACTGTTGTCTTTGCTGTGTCGGGCACATTGTTGGGCGGCTTTTATCCGGCCTCTGCGGGCACGGTGAGGCGCGGCGCTTGCCGGGATTGCACGGCCCGGGGTAGGGCGGCTTTGGCGTACGCTGCGGGGAAGATTGAGGGCTGCGGCGCAGCCCTATGCTGCGTTCGCCCGGCCCTCTCTGTCCCATATTCTTCCAGGCCCGCTGCCG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTGCCCGTGAGGGCAGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC with 88% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.10,-9.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [28.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 111469-112173 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACONZ010000004.1 Anaerofilum sp. BX8 BX8_ctg0004, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 111469 33 100.0 34 ................................. AGACCATTGACAACTGCATTGTGCTGGACTGGCA 111536 33 100.0 35 ................................. ATAAATACATAATATCCCCCGCCGGTGCCTTGTGT 111604 33 100.0 34 ................................. TTTTTTTGGCCTGCCGGGGCGCTTTGCAGGGCAT 111671 33 100.0 34 ................................. ACCCACACGGTTGCCGATGGATGCCCGCCCGACA 111738 33 100.0 33 ................................. CCCGCGCAGTCGAAATACAAAATCTGGTAGGTT 111804 33 97.0 33 ......................A.......... ACATGCAAGAAAAAAAGACCGCCTTGCGGCGGT 111870 33 97.0 34 ......................A.......... CTCCCGGGTATAGAACTCTTTTCCCGCGCTGCCT 111937 33 97.0 35 ......................A.......... TATGGGGAGTACGAGGCCTCCGTGGGCGTGGACGG 112005 33 93.9 35 ......A...............A.......... TGGGACACGGCAGCCTCCATGCTGCTTCTGGCTCT 112073 33 100.0 34 ................................. TTGGCAGATGCAAATAATATGCCAAGCAAGACGC 112140 33 72.7 0 ..........C..........A.AA...ACGCG | G [112154] ========== ====== ====== ====== ================================= =================================== ================== 11 33 96.1 34 GTCGCCGTCCGCAAGGACGGCGTGGATTGAAAC # Left flank : GGCCGGGAGCGGCAGATCGTGCGGTTGAGATACGGGTTTGCCGGCGGCGATCCTCTCAGTCAGCAGCAGGTGGCGGATATCCTGGGCATTTCCCGCAGCTATGTGAGCAGGTTGGAAAAGAAAGCCGTGGAGCAGCTGAAGGCAGCCATGGAAAAAGAATAGTCCCAGTACGGGAGCGGGAAAGAACGGTTTTTTTCGGGCAGCTCGATTTTTATAAAAAAGCTTTTTGATATATGGAAAGACATTCCATTTTTGTGTGGATCCAGATATAATAGATAAAGGGAAAGAGCTGTTCCGGATAGCTCTCTTTATACAAAAGGCGGGACGCGCTGTGGGCAGGTGCGAAAGAAGAGCTCTCATAAAATGGCTGTGAGGTTCGCACCGGAAAAAAGACCTTTTTTATGGTTCGAAGAATTGAAAACAAGGAGAGGAAAAGAAAAAACGACGATTTATGAGTGAACCTATACAAAGCTAAAGGCGATTTATTGTAAAAGTTCGCC # Right flank : GATCGGCAGAAAGCCGATACGCGGGGCGGCGCCGTGGCTGGCGCCGAAGAGGGCGCGGCCGATGCTCTTTCCCAAAAACGAAACACAAAAAGCACAAAAAGGGACAGGGGAGATACATTTCCTCTGTCCCTTTTTGTGTGGAGGCAAAAACGATCCCCTTTTTGAATCGAAAAACAAAAAATACCAAAAAAATCATAAAAACAATAAAAATAATGGACTTTTTGACGATAAAAACCTATAATAAAAGAAACAAAATGGAAAAAAGAGGATATTATGGACCGCTATTTGGCGCACCGCACAGAAGATGGGCGGCAGCAGGAACTGATCGATCATTTGCAGGGGACTGCCCGGCTGGCAGCCCTGTTTGCGCAAAAGTTCGGGGCCGAAGAACTGGCCTGGCAGATCGGCATGGCGCATGATATCGGCAAGTATTCTCATGCATTTCAGGCTCATTTGTGTGAAAACGGCCTTTCCCCGGATCACGCCACCGCCGGCGGTAT # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:0, 3:3, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCGTCCGCAAGGACGGCGTGGATTGAAAC # Alternate repeat : GTCGCCGTCCGCAAGGACGGCGAGGATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.40,-6.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-23.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : NA // Array 2 120428-121877 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACONZ010000004.1 Anaerofilum sp. BX8 BX8_ctg0004, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 120428 33 100.0 33 ................................. GCGCAGGGCACCCTTATGTGGCGAGTGCGCACA 120494 33 100.0 34 ................................. AGCGGGCTCACAATAGGCCATGCCGCACCACCTT 120561 33 100.0 34 ................................. CTCAAAAAGCTCCATCTGTCGGAGCAGGTCACCC 120628 33 100.0 34 ................................. GTGGGGCGGTCTGCTGATCGTCTGCATTGGGATG 120695 33 100.0 34 ................................. GATTTCGCGCTGGACTACCGCGTCGCCCGCTCGG 120762 33 100.0 34 ................................. GATGCTGTAAGGTGTAGAGAAAAAAGGATAAATG 120829 33 100.0 36 ................................. CTCGCTCAGCCCGATCCCCATCGCGGCTTCCAGCGC 120898 33 100.0 35 ................................. CTGTCACCGGCGTTTTCCCGGTTTGGGCGGGCAGC 120966 33 100.0 34 ................................. TCTGGGTGGATGGAGCGGACACTTCGGGGCCGTA 121033 33 100.0 35 ................................. TAGGGCTATCATACCACACTGCCTGTGAGCCTGTT 121101 33 100.0 36 ................................. CCCCGACAACCAGGACTTTACGCCCGTCTCGGCGGA 121170 33 100.0 33 ................................. CCGGACACATTCAGCGCATTTCGCGCACTTGAC 121236 33 100.0 37 ................................. TGGCCTCCACGTGCAGCCTGTAGATACAGGATTTAAG 121306 33 100.0 35 ................................. GAGCTTTCAGCCACGCGCAACATAAACTTAAACAG 121374 33 100.0 34 ................................. GATGCTCAGAGAATCTGCACAATGGTGCACGGTG 121441 33 100.0 34 ................................. AGGTCATCGGCTCACCTCGCTTTCGGTTTGCCGT 121508 33 100.0 34 ................................. GACGCCATGGCGAGATAGGTCAGGTCATATGCTG 121575 33 100.0 34 ................................. TTGGAATACGGAACGAATCGCTGGTGATCGTAAA 121642 33 100.0 35 ................................. TGCGCGATCGAAACAAATGTATGCCGCATCTCATA 121710 33 100.0 34 ................................. AACAGCACGGCGGTGGGGCGGGAAAAATCGGCGG 121777 33 97.0 35 ......................C.......... GTTTTGTGCTTTGAGCGATGTTGCCGGAGCAGCAT 121845 33 78.8 0 ....A.....TTGC...........G......T | ========== ====== ====== ====== ================================= ===================================== ================== 22 33 98.9 35 GTCGCCGCTCGCAAGAGCGGCGTGGATTGAAAC # Left flank : CGCGTATCCCCCCTTTTTGTGGAAATGAGGTGAAGCGATGTGCTGGTGCTCATAACCTATGACGTCAACACCGAAGATGCACAGGGGAAAAGACGGCTGCGCCGGGTGGCGAGAAAATGCGTAGACCACGGGCAGCGTGTGCAGAATTCAGTATTTGAATGCCTGCTCGACGCTTCACAGTGCAAACTGCTGCAGGCGCAGTTGCTCGAGATCATTGACTGCGAAAAGGACAGCCTGAGGTTCTACTATCTGGGCAACAGTTATGCGGCAAAGGTGGAGCATTTCGGGGTCCGTCCAGGATATGAGCCGGAGGGCATCTTGATGATCTAGTGCGAAAGGGAAGCACTCATGGATTTCCGGGGAGGTTCGCACCGGAAAAAGCTTTTGTTTGAAAGGTGATGGTAAAAAAAGAGGCTGTTTTTTTATGTGAAATGCTGAATTATCAAAAGATTTAAGGGAATGTGCACAAAAACAAGAAAGAAAAAATGTGCATATTCGCA # Right flank : TGCGCCCGGGTTGTCGTTTCCGTATCCTTCCAAAACAACAAAAAGGAGCCGTTTTCCTTTCGGAAACAGCTCCTTTTTGTTGTTCCTATCGCCAAAGCAGGATCGGTCAGCATTCAATGTTGGGACGGTCCTGGTCACCGTCGGCACGAAACATCACAAACCCTTGTGGGTCGCTGGTGAACAAATAGTATTCCACGTTCTGGATCAGGGGCGGGACAAGATAGTGCGGGATGATGTTTGCGCTGTTTTCCGTCCGCTCGCAGAGACCGGCGGCAGCCATTGTTTGGGCGGAAATGCCCCAACAATAGCAGTCCATATATTCTGCCGCTGACTCTGCCAGCAGGGCATTGAGCGCATTGCCAAAGCAGGGCAAAAGAGCAAGCTCGCCCACTATGTCCACCAGCCGCAGCACATAAGTACCTTTCACAGATACTTTGCGCAGGCAAAATAAAAGGGGACAACTACTGTCCAAAAAACCGCCATAAACCAGATAGCTTTGA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:0, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCGCTCGCAAGAGCGGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.40,-8.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : NA //