Array 1 74851-83146 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABAGW010000007.1 Clostridium beijerinckii strain DJ083 NODE_7_length_126410_cov_45.173628, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 74851 30 100.0 35 .............................. GCAGGTATTGCATTAGCAGCAGTATCAGCGTTAGG 74916 30 100.0 37 .............................. GAATTAAGTCCTGAACAGCAAATGTTTTATGCTAAAC 74983 30 100.0 35 .............................. GGTAAAACCCATGTAAGATGTATATTAAATGATAA 75048 30 100.0 35 .............................. GCTAATAATATAGTCTCTTTTCTGCATCTTCTTCT 75113 30 100.0 34 .............................. TAATTATCTTCCTGAAGGTGGAACAATTAATGAA 75177 30 100.0 34 .............................. ATTGAAACATTACAAAAGGAGATAAAAGAAAGAC 75241 30 100.0 36 .............................. ACTATGAAGTCACCTTCCTCATTTCTTCCTATTGTC 75307 30 100.0 35 .............................. CCCAGCTATAAGACTTATTTTATCAATAATTACTG 75372 30 100.0 36 .............................. TATAATAATACTATAAAGGTGCATTATGGAAAGAAA 75438 30 100.0 36 .............................. TGGCAGAAGGTTTTGGAAAAAAGGCTTAGAGGAAAT 75504 30 100.0 35 .............................. AATAAACTTAATACTATCAAATTTATACCTCCTTG 75569 30 100.0 35 .............................. GCAATTACCCTTAATTCCATTTCTACCCCTCCAAA 75634 30 100.0 34 .............................. GAGTAATGACCATGACCTATTATTCACTGTAGAA 75698 30 100.0 34 .............................. GGAAGCTTAATAGACAAGGATGGAAATGTTGTAA 75762 30 100.0 36 .............................. TGGTGAAGAATTAGGTATTGGAACAATTTCATTTAT 75828 30 100.0 35 .............................. GCTACAGAAAAGTTCTTAAAGCTCTTTTCCGCCTC 75893 30 100.0 36 .............................. ATTATTATTAGTGTTACATCAGTTACAGTAGCCCCT 75959 30 100.0 35 .............................. GGGAGCTGATGTTGTTAGAATTAAAGAACTAATAG 76024 30 100.0 34 .............................. TGGAAGTTCTCTTTAATACAATTAGGTTTTCTTT 76088 30 100.0 37 .............................. CCATAACTGATTATGAAAATAAGAAAGATTTAGTATT 76155 30 100.0 36 .............................. TTAGTCTTATTAAAGAAAAATGGAATTAATTTAGAG 76221 30 100.0 36 .............................. CGCTTTATGAAACTTAAAAGTACACCTTGATAAAAA 76287 30 100.0 36 .............................. CCTAACATACCTTTCTCGAATTTAGCAAAACTTATA 76353 30 100.0 36 .............................. GTGCATTTTGATTGAATCTCATAATTATATAAAGTC 76419 30 100.0 34 .............................. AGTATATGAGCTATATTATATAGATCAAAATGCT 76483 30 100.0 36 .............................. TGAGAAAAGTTGCTCAAAAAGGTGATGTCATATATA 76549 30 100.0 35 .............................. GCAAATGTTATATAAACTTTAATGTAATAACTTCC 76614 30 100.0 34 .............................. GATATAGGTAATGAAATAAGTGATTTTAGAAATG 76678 30 100.0 35 .............................. CAACAGTTACAAATAATGCTACAAACCCCCAAACC 76743 30 100.0 36 .............................. ACTACATTTTCCGAACCTATTAAAATTCTATTTAAA 76809 30 100.0 36 .............................. ACAATAATATCACCAACAGATGCACAATTAGAAGAT 76875 30 100.0 36 .............................. TCATTTCTTTAGCTGTTTTTTCATCTACTCCGTATT 76941 30 100.0 34 .............................. AGAGGATAGAAAGAAGGCTAGGGAATGGCTTATG 77005 30 100.0 36 .............................. TCTGTTAAGGAAAGGAAGTAATAAAAATGAATATAG 77071 30 100.0 36 .............................. GAGTATAAGTATAAACTTTCAGAATTTATATTAAAT 77137 30 100.0 35 .............................. AATAAGTGTTCCATCAATGTTAGTAGAAAAAATAG 77202 30 100.0 35 .............................. GAAACGCTAACAACTACACCAGTTGGAGTTTTATA 77267 30 100.0 37 .............................. ACGATATACATTTCAGGTCTTGTTAATGCTACATGTC 77334 30 100.0 36 .............................. AGGCACACAAAGCTTGGATTTAACAGGACAAACTAT 77400 30 100.0 36 .............................. ATCTCAATTCCCTTATGACTACGATCTTGCTGTAGA 77466 30 100.0 35 .............................. TTCAGTTAATATTGGAGAAATAGAAATCCAAATCA 77531 30 100.0 36 .............................. CCGAAACGAGGTTTAACTGTGGCTTTAGTACCAAAT 77597 30 100.0 35 .............................. ATAAATGTTAAATATGCTGGAGTTGACATAACTAA 77662 30 100.0 35 .............................. ATAACTCAGTTCCACTAAGCCAAGTTATTGAAAAT 77727 30 100.0 35 .............................. AATTATATATAATTTAAGTAAAAAAAGAAAGAGGT 77792 30 100.0 36 .............................. CCTTTCTGCATAGCTCTTACCTCTATTTATTGCTAG 77858 30 100.0 35 .............................. TGCGCAATTGTCAGATAGGGTGAAGATATCTGATT 77923 30 100.0 36 .............................. ATGGAAAGTAGTACCCCGTTGCGAGGATGATATACA 77989 30 100.0 36 .............................. GACACGATATGAAAAGGCTAAGAAGAATAAAAAGAA 78055 30 100.0 34 .............................. ACTAAAAATAAGTTAAGAATAGTTATATTTGCTG 78119 30 100.0 34 .............................. GTTGTTTCAATATGATTAATATTATAATCTTTAA 78183 30 100.0 36 .............................. AATGCATTTAAAATACATCCTTATGAATTGATTGAA 78249 30 100.0 34 .............................. AGTAATGCAAGTATATATTCTTCAAGGTTTTCTA 78313 30 100.0 35 .............................. TCCACAAATACTACTGGCGTTCAGTTTTCTCACGG 78378 30 100.0 34 .............................. TTAAATCCTAAACCCTGCAACTTTTCAAAATCAG 78442 30 100.0 35 .............................. TACTTGGGATAGTGTTACAAGGACATATGCTATTG 78507 30 100.0 36 .............................. ATAAAACAAGCAGTAAGAAAAATTGCTGATAGTGGA 78573 30 100.0 35 .............................. TTGTTAATCATCCTCTCTAAGTTGCATACAAATTT 78638 30 100.0 36 .............................. GTTAGAACCTTGACTAAGAAGATTACTAAGCTAATT 78704 30 100.0 35 .............................. TGGATAATAACAAAAGAAGCTATGATAAGAGTTTA 78769 30 100.0 35 .............................. TAGGGGGCAAATAATATGCCAACTTCGGTAAGTAT 78834 30 100.0 35 .............................. CTTGTGCCATTTCTCCAATAAATTCAGTTTTTATC 78899 30 100.0 34 .............................. TGCTATTTCTGATATTTATAGGATTTTACAACGT 78963 30 100.0 34 .............................. GAAGGAAAGGACGGAATAAGGTTTAAATTAGCAG 79027 30 100.0 36 .............................. GGTAATTGATAGCGAGACCATAGCTAAAAGTGGCAG 79093 30 100.0 33 .............................. TAACCAAATCCTTTATTTCTTCCTGGATAGTTT 79156 30 100.0 36 .............................. TGAACCATTTGACCAGTGGAATATAAACAATAGTCT 79222 30 100.0 35 .............................. ACCATTAAGTCGGCAGGCCGACTTAATGGTGACAT 79287 30 100.0 35 .............................. GTACCTATATTGGTAGTGAATATTTGACAATTTCT 79352 30 100.0 36 .............................. GTACTACCGATAGTTGCTTTTATTTGTGCTGAAAAA 79418 30 100.0 34 .............................. CCATGCATCTTATAGAATTACTTTTCTCAACAGG 79482 30 100.0 36 .............................. ATGAAATCAACATCCCAATCCATAGGAAATGCAAAG 79548 30 100.0 34 .............................. TCTAAAGGTCTTACTAATTCAAAACCAACAATTT 79612 30 100.0 35 .............................. AAAAGAGCATAAGAATCATACAATTGAGCAATTTT 79677 30 100.0 35 .............................. CTTAATGGGTTGTAGTTATTGTACAGAAGAACAAA 79742 30 100.0 34 .............................. ACTCCTATTGTATAGAACGCTTTTGCGTTAGTAT 79806 30 100.0 34 .............................. GTAAATACTTATCTTAGAAGAACTGAAGAGAAAC 79870 30 100.0 34 .............................. GTGACATATACTTTTGATGTAGATACACAAAGTG 79934 30 100.0 36 .............................. GACGAAACCACTATTGCTAATGTAGAAGATTTGGTA 80000 30 100.0 34 .............................. TAAATAAATGTATTTTGTAAAACCAATAGGTCCG 80064 30 100.0 34 .............................. AGAGAATCGGTCTCTATTTTTCTTTTTCCATTCT 80128 30 100.0 34 .............................. AATAGTCCTTCGGGGATTACTAAAAATACAAACG 80192 30 100.0 35 .............................. TTATTAGTAAAAGTCTTCTCTAACGATTCAATTAC 80257 30 100.0 35 .............................. CGATTTATAATAAATAATATTTTAATTATTTCCAG 80322 30 100.0 35 .............................. ATAAATCTATTTCTTACCTCTTAATTTACCAATAT 80387 30 100.0 34 .............................. TTAGCAGTTTCTATTGAAAGAAAGTCTTCTTGTA 80451 30 100.0 36 .............................. AAATTTATTCTGTCATTCTTCATATAAAATAACAAG 80517 30 100.0 34 .............................. ATATGCTGAAATAAATGAACATGCAACTAATATA 80581 30 100.0 36 .............................. CTTAAAATTTTATTAGATGATGCTACAACAGGAAAG 80647 30 100.0 36 .............................. TATGCTCACCTTCTATATTAACAACCTTTAAGACTA 80713 30 100.0 34 .............................. ACTATTCCACCACCAAACTACAAAAAATTTCTAT 80777 30 100.0 35 .............................. ATAGGTGCTGATGTGATATGATCTACTTCTAAAGG 80842 30 100.0 34 .............................. TCCACCATAATTGCAGATTGACCAGGTATTTGTT 80906 30 100.0 34 .............................. AAAAGATAGATGAAGAAAAAGAAGATAGTGACTT 80970 30 100.0 36 .............................. ACTAGATCCAGTAAAAGAGGCAAATGCTGCAGTAAT 81036 30 100.0 35 .............................. CCAGGAGAAGCGTTTAATACAATACAATCTGCATT 81101 30 100.0 35 .............................. ATCTATTATAGATGTAAGAGTTGATTCATCAAGTC 81166 30 100.0 34 .............................. AACGATGCAGTAAAGCAGCTTATAGCAGGTAACT 81230 30 100.0 35 .............................. GCATGGGCATAGAAATGATTAGTTGAAGAAAGGAT 81295 30 100.0 35 .............................. AGATTTAGCGACAGGACAAACTATTGAACTAGAAC 81360 30 100.0 37 .............................. AATATATTTAGTAGACAATAACTACTCACTTTCGACT 81427 30 100.0 35 .............................. ACTAAAAATGCTAATAAGAAAATGTTAACATTTGA 81492 30 100.0 35 .............................. TCCTCAGTTGAGTTAATGCTTCTTTCGAAAAATCC 81557 30 100.0 35 .............................. TCGAAGGTTCACCCATCAATTATTACCTCCTACAT 81622 30 100.0 35 .............................. CCGAAGGTTCACCCATCAATTATTACCTCCTACAT 81687 30 100.0 36 .............................. CCATTAAACGCCAAATCAAGCATATCAACTTTTACT 81753 30 100.0 35 .............................. TCAGAAACTCGGAGACTAAAAAAGCACTACCACCA 81818 30 100.0 34 .............................. GTGGGTAGCAAATTACAACCAATGTGTGGATAGT 81882 30 100.0 34 .............................. GAGTAATATTAATTCGGTCCACCCTGCAGCTGAA 81946 30 100.0 36 .............................. GTGGGCTTATGGTCCACCAGGTACCGAAGGCCCTTG 82012 30 100.0 35 .............................. TATGGAAAACCTTCAGGTAGTATAGCTGGGTTCAT 82077 30 100.0 34 .............................. TAGGTAGCTATTTGTGTGGCGTCTATGCATAAAT 82141 30 100.0 35 .............................. TTAGCTTTTGTGGATTCATCTTTTTGCCTCCTAAT 82206 30 100.0 36 .............................. TTATCACCAAAATTAGGTGACCAATAATCTTCTGAA 82272 30 100.0 36 .............................. AAAGAAAGAAATTACAGGCTTTAGCATTGGAGGAAC 82338 30 100.0 35 .............................. TCATCATCCAGGCATCTTAAATCGGATTCGGAAAA 82403 30 100.0 35 .............................. AGTTGAGCAATAGATGCTAATGACATTCCATTTCT 82468 30 100.0 35 .............................. AGATGGAGAAAAACAAAAAACTAATGAAGAAGGGA 82533 30 100.0 34 .............................. AGCGGTAGTACAACAGGAGACGCTGAATTAATAG 82597 30 100.0 36 .............................. ACTATTTCCATATAAATATCCTTAAGTAATATAGTT 82663 30 100.0 36 .............................. TGTATATCCTTGATCATATAGTATACAATGTTCAAT 82729 30 100.0 35 .............................. ATTTATCTTCAATTTCTTTAAAGAAGTCGATATAA 82794 30 100.0 36 .............................. TTTGGTTTTGATTTGACTAAGTATATCGGAGTTGAT 82860 30 100.0 34 .............................. ACGCTTCATATACGCTATAATACATAAGTACTCC 82924 30 100.0 35 .............................. TGGAGCTTCAGTAAAATATCAAGTTGCCGAAGGTG 82989 30 100.0 34 .............................. TCATTTTGAACATAATCATTATCGTTTAAAACAC 83053 30 100.0 34 .............................. TATCTGACAATTGCGTATTAACGCTAGCCAACTG 83117 30 93.3 0 ........................A....C | ========== ====== ====== ====== ============================== ===================================== ================== 128 30 99.9 35 GATTAACATTAACATGAGATGTATTTAAAT # Left flank : AGACTTTATTCCTTTTAGTTTAAAGGAGGACATGTAATGAGTAAAACAAGCAATTATAATTATGCATTTGTATTTTATGATGTCAATGAAAAAAGAGTACAAAAAGTTTTTAAGGTATGTAAAAAATATTTGTCTCATTTTCAAAAATCAGTCTTTAGAGGTGAAATGTCGCCATCAAAATTAATAAAATTTAAAACTGATTTAAACAAAGTTATTGATAAAAATGAAGATTTTATATGCATAATAAAGCTAATGAATGACAATGTCTTTGGAGAAGAAGTATTAGGAGTAACATCAGGAGTAACTGGCGAAGATCTAATAATATAATTTACCAGGCAAAAAATAATTGATGCAAGAACAAAACTAGATATAATGCTGAGTTACATAAGTATTTCTAGAACATTAAATTTTGGTAGTGGTACTTGGTAAATTTTTGTGAATATGTTACACTAACTACAGTTAGGGCATTATTCTAGTATAAGAATGGGCTTTTTTCTTTG # Right flank : CCAATAACGAACATAAACTTATATAATTTAAGCTCTTGTCAGAAAGTGACAACAAGAGCTTAGCTTTTTTGATTAAATGGATAAATAGAGCCTTATTTCAAAATATTTACGTATTCTATCTATTAATGTATACTTGTATTGAGTACATATTAGATAATATTTTGTTATGAGGGAGTGATAATATGAGTAAATATAGAAGTTCGTACTGTAAAATTTTCATCAACACAGATGAAGAAGAAGAAGTTATATTGAGTTTAATTGAAAAAATAACAATGGGTAGTAAAAAAAGATGGACAATCATCTCGGATTTAATGAAAATAGAATTGATAAACAATGAAGATTTTAGTGAAGAAAAAAGTGTTAAAGAAGAAGACGGTTTTCTATACTCAAAATATTATCTTGGTATTGAGCCTGGAGAAGGTATAAAGGAAGAACAGTATATTACAGGAGTAATAGTCTTGCTGGAAAATCTAAGATCATCAGGATACAAGGTAGTTGCT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 7869-2119 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABAGW010000080.1 Clostridium beijerinckii strain DJ083 NODE_80_length_21910_cov_38.591636, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ====================================== ================== 7868 28 100.0 35 ............................ TATTGTCCAGCCGTAAGAGTTACCGTTCCAGTTAC 7805 28 100.0 36 ............................ CTGGAATTGAAGGTGCTGTTGGTGAACTTGCTGGTG 7741 28 100.0 36 ............................ GACTATAGTAAAGTGTTGTACTTGCACTTGAAGCTG 7677 28 100.0 36 ............................ TGATTTAACCAGATAGATGTTAATTTCATGGCTTCC 7613 28 100.0 35 ............................ GTTCAACTTTCTTTTTAGTCTTAGTTATAATCACA 7550 28 100.0 37 ............................ TCGATATATATGAAAGATATATTAAAGAAATAGATAG 7485 28 100.0 36 ............................ GTCTATACGACCTTTCCCTCTACCACTTTGTATTAT 7421 28 100.0 35 ............................ TACATTGGATATGTTAATTATTTTGTACCAGTTGC 7358 28 100.0 36 ............................ TAACATCGTCTGATACTCTACAAGCTATAGTTTTTG 7294 28 100.0 36 ............................ TTGGAAAAGGGTTAGTCGTAAAGCGATTAAAAGAGC 7230 28 100.0 36 ............................ CCATAACTACTATTTGTAAGTGTAGTTTTGAAGCTA 7166 28 100.0 37 ............................ ATTTACAAATAGAATTAGAAAAGCAACAGCAGTTTAA 7101 28 100.0 37 ............................ GCAAAAGGAATGTCTGTGCTTGAAGCTATGAAAGCAG 7036 28 100.0 36 ............................ GTTGGAAGTGCAATAGATATTGAATTAAATAAAAAA 6972 28 100.0 36 ............................ CCAGCAGTTGTAGAAGCAATTGACATTTTAAAAATT 6908 28 100.0 36 ............................ TTTTATCACGTGTAAATTTAGCATTTTTTCTTAAAT 6844 28 100.0 35 ............................ ATGATACAGGAACCCAAAAAGAAAACAGTAGATTC 6781 28 100.0 35 ............................ ATTAAAGAGAAGATAGCTAAATTATTAGGATGTAC 6718 28 100.0 37 ............................ ATGAACACTCTTTCCACTCATTTCAGATAGAGCTTGT 6653 28 100.0 37 ............................ GCAATTTCATCTATGCCATTCTTACGCTCTATCGCTA 6588 28 100.0 37 ............................ CACTTATAATATTATTTTTATTTCTTCACACTTGTTT 6523 28 100.0 37 ............................ AGTGCATTTGCTAAAGAATATATGGTTTTTATTCTTG 6458 28 100.0 37 ............................ ACATTTATACCAGTGAAGCTAAAGTCCATCCCTAGAA 6393 28 100.0 35 ............................ TAGTGATATGGAGATGGTTAGAAATTATGTAAATA 6330 28 100.0 37 ............................ TACCTAAATATTCTCTAGCTTCTTTATGACTTAATTT 6265 28 100.0 35 ............................ GTTTTTATTTAAAAATTAAAAAGACGAACTATTTT 6202 28 100.0 36 ............................ CTATACCTATATACATACTGTATTAAACTTAAATAA 6138 28 100.0 36 ............................ TCTAATCCTATGTAATATTGTTCTTTAGTTCCACTG 6074 28 100.0 37 ............................ CATAATAAACATACTTATACACATATATTATAATAGT 6009 28 100.0 36 ............................ ATTTCCTCTAATGTACTACAAGCTTGTTCCATAATT 5945 28 100.0 36 ............................ ATTTTTTCAGCTAATTGATTTAAGGAAAGTTCTTTT 5881 28 100.0 37 ............................ GGCAATTTATCAAAAGCTTCTCCAATATTTCCTATAA 5816 28 100.0 36 ............................ TTTTTCTTTATTGTTCTTTCTGTATTTTCCTCCCAA 5752 28 100.0 36 ............................ TAATAAAGATGGAATGTGTGGCTCTGAATCAATAGA 5688 28 100.0 36 ............................ CCGGACCATTTACCTAGTTTTGCAAGTTGAACCATA 5624 28 100.0 36 ............................ CTAAATTAATATCCAAAGTTTTTGTATTTATGTTTT 5560 28 100.0 37 ............................ TCATTAGTAGCTGCTTTAAAAACATCCGTCTTTGCAA 5495 28 100.0 36 ............................ TAGTTATAGCTAAAACTTATCTTATTGCCTTGTATT 5431 28 100.0 37 ............................ GTTCAATATAGTTATAAGGATCAAAAAAAGAAAGAAA 5366 28 100.0 37 ............................ TTATTTACAGCGTACTTTACTGCGAAAAATGCCATAG 5301 28 100.0 36 ............................ TAATTATTAACTTTGGCACCTGTCATCTGTCCCAAT 5237 28 100.0 37 ............................ CTAACGACAGTAGTCATATCAGGAGCAGTTTCTTCGG 5172 28 100.0 36 ............................ ACTGTAATCATTTCAGAGATTGGCAAGAAATAATTA 5108 28 100.0 37 ............................ ATTACTAAAGGTGAAATGGTGAGTGCTGATGCAGTAA 5043 28 100.0 37 ............................ AAGACATTACAAGGCTTGCAAACAGTCACTAATAAAA 4978 28 100.0 36 ............................ AGCACTAAGGGAGAACGTAATATGGATCAACAAAGA 4914 28 100.0 37 ............................ GAAATTATTTATGAAAATAATGCTGAATTACAGGCTA 4849 28 100.0 36 ............................ TGTCAACACCAAAACAACACTATTAAAAAAAATAAT 4785 28 100.0 36 ............................ AAATATAAATCATAAACAATAAATAAAAACTAACTT 4721 28 100.0 37 ............................ GAAGGTAATGATTCAGATGTTAAATTTGGATATGCAG 4656 28 100.0 36 ............................ ATATTTCAAACAGTTTTTCCTATAATTGGGCAAATA 4592 28 100.0 36 ............................ TGGGAACGTTGGGAAAATATCATAGAAGAATTTAAA 4528 28 100.0 37 ............................ ACTATTTTCTCTAAGTTCTTATCATTTGCAGTATCAG 4463 28 100.0 36 ............................ CTATAAAAAGTAATCATCTTTCTCTAACTCCTAACT 4399 28 100.0 37 ............................ GTTGAAGTAGCGACTAAAGCTTTTCCAAAAGTAGTTG 4334 28 100.0 36 ............................ CGTATAAGAGCATTTATTAAATTTATAAAGAATACA 4270 28 100.0 36 ............................ TCATATAAAGCAAGAGTGGCAAGGTTAGATTTAATT 4206 28 100.0 37 ............................ ACATTTTTGCAAGGATTGAGTGATTATTTAAGCGATA 4141 28 100.0 37 ............................ ATACATTCAACCTCAGAAACTTTAGCACCAATTGAAA 4076 28 100.0 35 ............................ TCGTAAATTCTTGTAGTACCATCACTAGAGTACTG 4013 28 100.0 36 ............................ CCTTATAATAGCATATCAAGTGCAAGTGCATTATAT 3949 28 100.0 36 ............................ TTGCAAATACTCTTTATTTTGGTTAACTATATTTTC 3885 28 100.0 37 ............................ ACAGGAGAAGAAATTACAGTATTACTTAAAATATCTA 3820 28 100.0 37 ............................ TGATAATGCACAAAGTAGCGTTAAAAACTGTCATTTC 3755 28 100.0 38 ............................ TCTTAAAATCAATTAACTTATTGTATCTAAATTATTTA 3689 28 100.0 36 ............................ TTTAATTTCGTGCATCTATTGTTAATAGATATTAAT 3625 28 100.0 37 ............................ ATATAATATTTAAACTCTTCAATTGTATAAACAGTCT 3560 28 100.0 36 ............................ AAAGGAACATATATCATAGATTGTTTAACGGATCTA 3496 28 100.0 36 ............................ AGTAAGTAATCTAAGCTTACATTGAATAGATCAGCA 3432 28 100.0 36 ............................ GTATTAGATAAATCTTGTGCTTTTAAACCACTTACA 3368 28 100.0 35 ............................ CCTATAACGATACAATCATCTACAACAGCAATTGC 3305 28 100.0 37 ............................ AGAGAATTTCTTTGAATAAGTAAAAAATCTTTTACCA 3240 28 100.0 36 ............................ AATAAAGGGGGAATCCATAACGGAAAAGAATAAGAA 3176 28 100.0 36 ............................ TAAATACCTCCTATTTAGTACCAGTAACAACATAAT 3112 28 100.0 37 ............................ AAAATAGCAGTAACAGCCGAAGTAACATTTTCCATAC 3047 28 100.0 36 ............................ CAAACTATAAAATTAATTAACTATGGAGAATTACCA 2983 28 100.0 37 ............................ GCAAATTCAATAACCGTTAATAAGTCATACACTTCTC 2918 28 100.0 35 ............................ ATGAATATTCAAGAAAACAATCTTCACACAATATA 2855 28 100.0 36 ............................ ACGACAAATAATCAACAGTAACTTTATTACGACGAG 2791 28 100.0 36 ............................ TTTTCTACAAGATATCCCAATATGTCATTAAGAGAA 2727 28 100.0 36 ............................ CCAATCAGAGGATTAAAGAAATGATAAAAGAATCTA 2663 28 100.0 38 ............................ ACTTATAGTTCACGTTCTATATCAAATAATTATTATTA 2597 28 100.0 37 ............................ TTTGATAAGCGTTGAATAGCTTCATTTAAGGTTTCTA GG [2577] 2530 28 100.0 36 ............................ TACTCAGTTTTTAGAGTGGAAGTATGGTAATAAAAC 2466 28 100.0 36 ............................ TAGGCTAAAGTGGCAGGGTTAAACTCGATATATATA 2402 28 100.0 36 ............................ GTGCATATTCTGCATTATACAGACCAGGAACAACTG 2338 28 100.0 36 ............................ CATAAAAGAAAATAAGTTGGATGAAGAAATGAGAGA 2274 28 100.0 35 ............................ GTTAAAGCAAGAGCAATTCAACTTATGATATCTAA 2211 28 100.0 37 ............................ GCAAGAGGTCAACATGTTAAATTTGATGGTGAAATTA 2146 28 96.4 0 .G.......................... | ========== ====== ====== ====== ============================ ====================================== ================== 90 28 100.0 36 GTTTTATCTTAACTAGAGGAATGTAAAT # Left flank : AAGCATCTAATAAAAGATGAAAAATATAAGCCATTGAAAGCTTGGTGGTAAAAATGTTTGTAATAATTACTTATGATGTTAACGAAAAAAGAGTAAATAGAGTAAGAAAAGTTTTAAAAAAATATATAACGTGGTGCCAGAATTCAGTTTTTGAAGGGGAAATAACTGAAGGAAAATTAACAAAATGCATGGCAGAAGTTAAAAAATATTTAGTAGACTCAGAAGATTCACTATATATTTATAGGATTCCTTATACAAAAAACATACAGAAGAAAGTTATAGGGATAGAAAAGAATCTAGATGAATTATTTTTATAATTGCAGTAAGCGATTTTTATTACTAGATACATCTAAAGTTAGAAGAAATCTAGATTTGAAGAACATTTTATTTAGTTGCAAAAATCATTACTGTAGCTTTACTGCAAAAATTTATGTTATAATATAAAAAAATGCACGCTCATGTGGCTAAAATAGGTGATTTGAACTATGTATTTTTTCGGG # Right flank : TAATTTTAAGAGCTTATAAATAACCAAGAGTAGTTGCCAAAAATAAAAAATAATAACTAAAGCCAAAGAAAATTTAAATTTAATTGATTTTTATGTTTACAAAATGGAAGAAAAACTTCTTTAAGTATATGTAAAGCAAATGAGTTAGCTAACCTCAAAGGCTTAATTAAAATTATTTTTATATTTTAGGAGGAAAAAATTATGGGTTATTTAGGAATTAACATGTCAGGATCAAGTATACCAGTATATTCTACAAATATTGAGGATAACACAAGAATAGGAAGTTTGGGATACAAAGAACGATTTGCAGTTACAAGCAGTGGACCAATTGCAATAGTTATAAAGTTTGTAAATTCTTCAGGGAGCTGGGTTGATGGTAGATTAGATCCAGATGCTGATATTAGTGATTGGTGTGAATATTTATTTAGATCAAGCGCAATACCAGCTGGATATTTCCGCACTGATAGTACAGTAAGAATGTATGATTCATCAGGAAGTTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATCTTAACTAGAGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA //