Array 1 230472-231593 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJFDS010000006.1 Parabacteroides distasonis strain SL.3.10 FJPIHJNP_6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 230472 47 68.1 29 AAG..T.AG.AT...T...A...........C....CAA.......T CTTGGGGCGAATGGTGACGGTTGGCTTGC A [230483] 230549 47 95.7 30 ...........T...T............................... CACACGCTGGCCGTTCACATAACCCGTGTC 230626 47 97.9 30 ......G........................................ TGATTGCTCCCAGTCCCTTTTTCGTAGTGT 230703 47 100.0 30 ............................................... TAAGAAATTCAATCATTTCAGTGATAGCAT 230780 47 100.0 29 ............................................... TCAGGTATGTATCTAGCTTTAAGGTATAT 230856 47 100.0 30 ............................................... TCTTGAAATTCGAAAATCTGAGGTTAAGTT 230933 47 100.0 30 ............................................... AACTTCAACTGATCTATGGTTGCAATATGG 231010 47 100.0 29 ............................................... GTCATTAAGCAATTTCCACAGGTCGTAAG 231086 47 100.0 30 ............................................... TTCTCAATTTAATTTCTTTACAATGAATCT 231163 47 100.0 29 ............................................... TTCATACGCTAGAAGCAAAAATAGAACAA 231239 47 100.0 30 ............................................... TTTAATATTTAAGAATAAGAAAATTAGATA 231316 47 100.0 30 ............................................... CTTAATTAATTAATTAAATAAATAGTTACA 231393 47 100.0 30 ............................................... TTATAATTAGTTCTAGCATCATTAATTCTT 231470 47 100.0 30 ............................................... CGCTGACAGATAGGACAAAAAGCCCGATGA 231547 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 15 47 97.4 30 GTTGTGATTTGCTTTCAAATTAGTATCTTTGATCCATTGGAAACAGC # Left flank : ACCCGTGGGGGATTCGTCTGGGGCTGTCGTACAAGCAGGTTCAAGAGAATGCGTCGTTTACCGGAGTGCTCACAGCTAAGCACTTCATTTATCAGCTCATCCTGTTTATCATATAGCCATTCGTTTTCCTTGGTCGAGAAATGGCTACAGACCCATAACGCTTGATAACTAACGGCATCATCCGGATCGAATATCAGATCGTATAGCTCTGCTTTCCGTTCTTGGTTCCCTTGTACATAAAATAATATCTCATGGATATCCTCTATATGACAGCGGCTTGATAGTCTCTCTTTTAGGTCCATTCTCAATCTTTGTTGTTGTCTCTTTATCTTTTCTGCCGTAAAGTTATAGTCTTTTTAGCAAAGTTTCCCTAGTTCACTTACTTTTGTGCCCCATTGATAAAAGAATGGATAGATATGCGATATATGAATTTATTAAATGATTTAACAATTGATTGTAAAAATAACGGAGGGTGTTACCGAGTAAAGGATCAGTTGAAG # Right flank : CTTAATCTGTATTATATGCTGTATATCAACTAGATGATAGAATGGTTAGAAAATAAAAAAGAAAAGTTTCCAATGTAATAAATCCCGTTTTATGACGGGATTTATTATTTCTAGAAAAGCTCTAATTGTTGGCCGGGTGTATTAGGAGGTTGTACTTTTTTCCCATAGAACAACTCAATATTCCCAAATTGTTTGTCTGTAATGCACATTATTCCTATTTGCCCGTGTTCTGGTAAAAATGATTTTACTCGTTTTATGTGTACTTCTGCATTTTCTTGGCTGGCGCAATGTCGCACATAAATAGAGAACTGAAACATGGTAAAGCCATCACGCTGCAGATTCTTACGGAAATCACTATAAGCTTTCTTTTCTTTTTTTGTTTCCGTAGGTAAGTCAAATAATACCAACACCCACATAATACGATATTCGCTAAATCGATCCATGATTATTACCGTTCTGGATACACGATTCTTCGTTGCTCTCCACTGAAACATTTGTAA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCAAATTAGTATCTTTGATCCATTGGAAACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.96%AT] # Reference repeat match prediction: F [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.10,-2.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,1.05 Confidence: MEDIUM] # Array family : II-C [Matched known repeat from this family], //