Array 1 819369-823300 **** Predicted by CRISPRDetect 2.4 *** >NC_014727.1 Lactobacillus delbrueckii subsp. bulgaricus ND02, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 819369 28 100.0 33 ............................ CCACGCTTGAGAACTCAATGGTTACTGAGTTTT 819430 28 100.0 33 ............................ CTATGGCCTTGATGAAAAAGAAGCCGATGAATG 819491 28 100.0 33 ............................ TGATGGAACAAGATATCTGTTTGCGTCACGACG 819552 28 100.0 33 ............................ TAAGCCAGCGCGTGGTGGGCTTCATCGATCAAA 819613 28 100.0 33 ............................ TTCCTCTGCGCTCCCCGGTTGGGTTTTAAAGCT 819674 28 100.0 33 ............................ CATATCGGGTAAGGCCAACTAGTCAAGTTAAGA 819735 28 100.0 33 ............................ TAAGTATCAAGATAAAATTTACTGTAATTCCGG 819796 28 100.0 33 ............................ TCAATACTACTCGATGTACGGGATCCGTTGGCA 819857 28 100.0 33 ............................ TAATCTAGCACTAACTCTTTGTTTAATTATTTT 819918 28 100.0 33 ............................ TATCGGATTCTCTCATGATTTTAAATGCCCCAT 819979 28 100.0 34 ............................ TAACAACTTGACCACGATCAAGGCTCTTGACCAA 820041 28 100.0 33 ............................ TACAGGCGAATCAAGACAGCAATCAGAAAGGCA 820102 28 100.0 33 ............................ CGGAGAATGGTGTAACGGCGTGGATTTACGGTG 820163 28 100.0 33 ............................ TTTACCTTTGAATTTTTCCGTTGATAAGACTTC 820224 28 100.0 33 ............................ TAAGAGTCCAAGTGTATTGGGTTGGATCGGTGC 820285 28 100.0 33 ............................ TTACAGCGAAAGCAGAGTTAGAAATATTGCCAA 820346 28 100.0 33 ............................ TTGTTCTGACGCCGTGACGTAAGCAGATGTCCT 820407 28 100.0 33 ............................ TCAGAGACACCACTGCGTTGACGGTTTCGCCGG 820468 28 100.0 33 ............................ TTCTTGATCTCTGCCTTAGCTTGGTCGACCGTG 820529 28 100.0 33 ............................ CATCGCCAGCTACCTGGCAGCTGAAGAGTCAGA 820590 28 100.0 33 ............................ CTTAACGGCCATGACATTGAGAAGGCCAAGGGG 820651 28 100.0 33 ............................ CTCTGCTGTCAAGGAAGCTCTGGCCAACGCTCA 820712 28 100.0 33 ............................ CTTTTGGAATGCCGGTCTTGCCCGCCCACTGAT 820773 28 100.0 33 ............................ CAGCAAGGCTACTGTCAAGACTATCTTAGGTAC 820834 28 100.0 33 ............................ TTTCCTGATTAACAAATTCGTTGGCTTAAACGA 820895 28 100.0 33 ............................ AGTACTACTGGACAGTAGAAGATGGACAGGTGG 820956 28 100.0 33 ............................ TGGCTGCCGAAGTAGTCATAGTCGATGCATCCT 821017 28 100.0 33 ............................ AATTTTGTTGGTTTCAGTTGACCCCGCTTTTGG 821078 28 100.0 33 ............................ TTTTTCACTCATCGATGCCCTCTCTTCTTCGTA 821139 28 100.0 33 ............................ CGTCGTTGGCGACGGTGTTGTTTCAGAAGTGTC 821200 28 100.0 33 ............................ CCTCTAGTAACTCACATACGTCACCAGGGCGAG 821261 28 100.0 33 ............................ TTTCGAGTTAGCGGTGGTAAAAAGTGAAGTAGT 821322 28 100.0 33 ............................ TCAAAGCGGGTATTTTGGCTGTTTGCAAAGATC 821383 28 100.0 33 ............................ TTGAAGAACTGGAGTTGTGAGAAAATGCAAAGT 821444 28 100.0 33 ............................ CTCAATGGTGGCCCAGGTTGGGCCAATTGTGAC 821505 28 100.0 33 ............................ TTTACTCTGGCGCATCCCTGCTGCGGACGGCTA 821566 28 100.0 33 ............................ TCGCAGCCCAGGCCCGGGCTCTCTTGGCTTCTG 821627 28 100.0 33 ............................ TCGTTGCGCCTTTTTTGTAGATCCCGCCTTTTA 821688 28 100.0 31 ............................ CTTACTTTTTGTAAGCAAAAAAGCTAACCTG 821747 28 100.0 33 ............................ TCTAGCAAGCTTTCAAGCTTGCAAACACAATTA 821808 28 100.0 33 ............................ TTCCCATGAGTTCATGAGAATAGATGGAATTGA 821869 28 100.0 33 ............................ CGTGTTTAAGGCGTCTATGCATGATTGCCTTTA 821930 28 100.0 33 ............................ CGCCTTACTAGATAGTAGTAATAACATAATTCA 821991 28 100.0 33 ............................ CTAATGAAAATGAGTTGATTTCTCTCAAGTCTG 822052 28 100.0 33 ............................ TTAGTTTGATTCGGGCTGAATTGAAAGCACCAA 822113 28 100.0 33 ............................ TCACCGATTTTTCCGGAGATACGCATAAAGACC 822174 28 100.0 33 ............................ TTGTCATTGTGAATCAGTACACCGAGACCATCA 822235 28 100.0 33 ............................ TGGCCGTGCCGCCATTTACGGTGTCCCACAGTT 822296 28 100.0 33 ............................ CTTGACACCGTTTTTTAGTAGCAAGCCCGGGGA 822357 28 100.0 33 ............................ TTAAGAAGTTTTTTTATTTTTTCTTTTCGGCTA 822418 28 100.0 33 ............................ TTTCAGTTTGCGAAATATCGAACACGCAAACCG 822479 28 100.0 33 ............................ CTTCACAAGCGTTCTTAGTCAAACCATCGACTA 822540 28 100.0 33 ............................ GAAGGGTGAGACCAACGCACTGGCAAGATGTGG 822601 28 100.0 33 ............................ TCAAAGTTAGGGTTACGGCGCCAGGCCTTAAGC 822662 28 100.0 33 ............................ TCACTGGAAATGGAGGATTAGATGGCGAAAACA 822723 28 100.0 33 ............................ TCACCAAGAAGAAAAGCTTGTAGAGGGCTTATA 822784 28 100.0 33 ............................ TTATACGCGTTTCCGTCGGTAATGCAAGCATAA 822845 28 100.0 33 ............................ CCCTCACAAATTTTTCCAGTTCCTGGTGTTCTT 822906 28 100.0 33 ............................ CTGCCAACACTGCAGACTTACATGATCTGCTGG 822967 28 100.0 33 ............................ TGATCAGAACTAGAATCTACCCGGTTACGGGCT 823028 28 100.0 33 ............................ CCCTCACAAATTTTTCCAGTTCCTGGTGTTCTT 823089 28 100.0 33 ............................ CTGCTGAATGAACTCATCAACCGTGATGCTGCT 823150 28 100.0 33 ............................ CTCAGACTATTCTACTTCAGACTTCATCTATAC G [823172] 823212 28 100.0 33 ............................ TAGCTCGTCTTGAACAGCATTTAGTAAATCGCG 823273 28 85.7 0 ............T.T.......CA.... | ========== ====== ====== ====== ============================ ================================== ================== 65 28 99.8 33 GTATTCCCCACGCAAGTGGGGGTGATCC # Left flank : GGATTGAATACGGAAAGTGATCAGATTTTGTCTATTGGCGCGGTGAAACACGATGGTACAGAATTCTACCGACTGATCAAGCAAGATATTGATGTGCCAAAACAGATAGTGGAGCTGACCGGGATAACTCCAGCAATGCTTGATAAGGAAGGTGTCCCACTGCAAGATGTTTTGGGAGAACTAACTGACTTTGTTGGGGATGTGCCAATCGTTGGGTATAATTTTAGATTCGATTCTGCATTTTTGAATAGGGAATATCGGAAATGCGGGATGCAAGAATTAAAAAATGAGATCAAGGATTTGCTGCCAGTTGTAAAAAGAAAAGAAAAATTTCTGGACAACTATAAGCTACAGACTGTATTATCAAACTACGGGATCGAAAACAAGGTGCCGCATAATGCTGTGTCTGACGCAAGGGCTACGAAGGAGCTGGCGATGAAACTAATCAAAAATCGCATTTTGGTGATTTGAGAATGGCGTCGCTAAAGGGATCCATTACT # Right flank : CGTTCTTTATGTTATTGTGCTTTTCGTACTGTGTATTTTCCATACATATGCCGCGATGATCATAAGTTTCAGTTAAAGCACAAGCAAATTTCAAGGATCTTTGGTAGAGTAGAGAGGTAATAGAGAAGGAGTGAGGAACAAACATGAGCATTTACGGTAAGTACGCCGATTATCTTCCACAGATCCTGAATTCTGTTTTGCAGCAAATCCAAGGCATCGGTCAGGAGTATAGTGCAAAACACGGGCAAAAGCTATACGAGTACCTGAAAGGTCGCGTCAAAGGCGAAGAAAGCATGACGCAAAAGTGCGAAAGAAAAGGTTTACCGCTGACGCCAGAGTCTGCATTGATCGAAAATCGAGATGCGATCGGCCTCAGAATCGTCTGCAACTTTATTGACGATATCTACACTTGCATTGACTTGTTGAAGAAGCAGGACAACTTCAAGATAATTAATGAAAAAGACTACATTACCGATGCCAAGACAAACGGCTACCGGTCA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCACGCAAGTGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCACGCAAGTGGGGGTGATCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.30,-10.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //