Array 1 486-2911 **** Predicted by CRISPRDetect 2.4 *** >NZ_QRZO01000029.1 Bacteroides fragilis strain AF14-14AC AF14-14AC.Scaf29, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 486 47 95.7 30 ..........A...C................................ AAATATTCCTGATTCAAACTTTTTAGTTGC 563 47 100.0 30 ............................................... TGCTTAAAGGCTATTCCATAAGTCAACGTA 640 47 100.0 30 ............................................... CGTTGTCATTTCATCCAGAAAATAGACGAA 717 47 100.0 30 ............................................... AGAATAGAAAACATCAGCTTGAGATGCAGC 794 47 100.0 29 ............................................... AAAGAGGCTAATTATCGGTTACCCGGCAT 870 47 100.0 30 ............................................... GATGCAGGAATTATTCGCGGTGAATTAATG 947 47 100.0 30 ............................................... TCCTGCTCCCGGCACTTCCTTTGTGTTAAC 1024 47 100.0 30 ............................................... CAACTTCGTTTCCACATCTTCAGCCCACTC 1101 47 100.0 30 ............................................... GATGAAGATGTAGTTGACCTATATTCGTCT 1178 47 100.0 30 ............................................... CAACGCTGACCTGCAAGGCACCATCAACGG 1255 47 100.0 30 ............................................... ACTCAGATTCCAATGGTGACAGGTTTTTTA 1332 47 100.0 29 ............................................... GGATTCAGACCGTTTGCCGGATTGTTGTA 1408 47 100.0 30 ............................................... TATCCACGACTCCCAAGATTACGAGGATAA 1485 47 100.0 30 ............................................... AATCGGTTTCGAATAATACAAACGACACAG 1562 47 100.0 30 ............................................... CAACGAGCTTTAACAAGGTCTTGCGACCAG 1639 47 100.0 29 ............................................... GACATCACCAAAGTAAACGGTCGTGCAGT 1715 47 100.0 30 ............................................... ATTTTGTTTCAGTTTAGAAAACACTTTCAT 1792 47 100.0 30 ............................................... ACATGAAAACAACGGTGTTGCAAGGAACAA 1869 47 100.0 30 ............................................... CCTTCGTTTGGTTGGATAGGTTCACTACCA 1946 47 100.0 30 ............................................... AGTGACTTCGGATTAACTCACATTGCCTCA 2023 47 100.0 30 ............................................... ATTCAAAAGACGCTTGACGAACAAATGAAT 2100 47 100.0 30 ............................................... CCAATCGAACTGTCCGCTGCTTGTGGAGTT 2177 47 100.0 29 ............................................... ACGTTGTTAGAGCGAAGACCATTGTTTGA 2253 47 100.0 30 ............................................... TGCCGAGGTCGATTTGAAGTTGGCAATGAC 2330 47 100.0 29 ............................................... CACTTATTGCAATGTGTTCCGTCAAATAA 2406 47 100.0 29 ............................................... CATTTTTTAATGTAATCTTTTTCATATGT 2482 47 100.0 29 ............................................... TACCTTTAGCAGAAGAAGCGTCAATAATT 2558 47 100.0 30 ............................................... GGCCGCACAAGTGTAGGCTTTCCATTAAGT 2635 47 100.0 30 ............................................... CATCATCCATTGCGGACAATAACTTGAAGC 2712 47 100.0 29 ............................................... GATTCAAAGCAAGTTCACGGAGGATATAA 2788 47 100.0 30 ............................................... TCTTCTGATCGCAAACACTTATCGGCTATG 2865 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 32 47 99.9 30 GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGT # Left flank : CAAGGAGACACATTATTATAATATATAGAGGGGGAATACTTGGAAAACAAGGAGGGGGGATTCATTGGGGAGGGAGAGGAAGAAGGTTTTTTAGTAGAATTGCGGAGAAAGATTGGGAATTTGGCGTTAACATTGTTAATGCGATTGAAAGGGGAATTTGTTTCAGGAGCGGAAATAACAAGGCTTTTGGATTGAAAAGACTTATTATTTGAAGATAAAGGACTTGATTTAATAGGGTGTTAAATCAAGTGATAGGAAAAGAAGAAACAAAAGGGAGAAATGGATTGAAAATGAAAGTAATAGAGGGACAATGAGTTATTTTTCGGAAAAAGGGATAAGTGGTGGACAGAAAGTGATAGTTGTGATTAGAACAAGTATGATTGTAGAGGATTTTTAAAGGAAAGGTTTAAAGTGGAAACGGAGGAGTACAATTACGAAAGACCATTGGAAATAGCATATGCTATCTGATGAAGACAAAGCGATGCG # Right flank : TTATATCCCGCATAATAAAATGGTTTTCAATAAGTTAAGAGTAAATCAGAAAAAAGAAAAAGAAGACTATTTCCAGCATAAAATCTCGTATTAATGCGAGATTTTGTTTTCTAGAACAACTCCAATTGCTGTCCCGGCGTATTGACATCTTGCACTTTCTTCCCATAAAAAAGTTCTATATCCCCAAATTGTTTATCTGTAATACACATGATTCCGACATGCCCAAATTCAGGGAGAAATGATTTAACTCTTTTTATATGTACTACTGCATTCTCGCTACTGGCACAGTGACGCACATAAATGGAAAACTGAAACATCGTAAAACCATCCTTTTGTAGATTCTTTCTGAAATCTGCATAAGCCTTTTTCTCTTTCTTCGTCTCAGTTGGCAAATCAAAAAGAACAAGCACCCACATAATACGATATTCATTAAAGCGATCCATAATCTATCGTTCGGGATAAGAAATTCTCCGAAGCTCTCCATTGAAACATTTATAAAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: F [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.20,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,1.05 Confidence: MEDIUM] # Array family : II-C [Matched known repeat from this family], //