Array 1 11860-10303 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFLNG010000025.1 Streptomyces sp. FH025 25, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 11859 29 100.0 32 ............................. TGCTCGCCGTCCTTCATCGCGGTGCGGAGTTC 11798 29 100.0 32 ............................. GCGCGCCGATAGGACGTGATCTCCCACAGCAG 11737 29 96.6 32 ............................G GCTCCACCCGCGTCCCGGGCAGATCAGCGCCG 11676 29 100.0 32 ............................. TCGGCAAAGGACATGGTCTTGACCGCCGAGCA 11615 29 96.6 32 ............................T CATGCGCGCACCTCGGCGAGTGCGAGTCGTGC 11554 29 100.0 34 ............................. CGCAGCGAGCACGAGAAGTGGATGGACTGGACGG 11491 29 96.6 32 ............................G GCGTTTCCGGCCTGGACAACGGCGTGTTCGTG 11430 29 96.6 32 ............................G TCGATGCACAGGCGCCCGAAGTCGACCGGGTG 11369 29 100.0 32 ............................. GACCTCGGCAGCCTCGCGCTCACTCAGAACCC 11308 29 100.0 32 ............................. GACCAGGCCGACCTGATCCTCCAGTACGCCCG 11247 29 100.0 32 ............................. ACCCCCTCCCGTCTCGCCGCCGCCCTTTGCCG 11186 29 100.0 32 ............................. GTGGAAGCGTTCCTGACCGGTCCGAACGGCTA 11125 29 100.0 32 ............................. TAGCGCTGCCGTCTGGATAGCGGCCCAAGTGA 11064 29 100.0 32 ............................. GGCGACTTGGTGGCGTGGTACCCGGACTACTA 11003 29 100.0 32 ............................. GGGGTCTGTGCGGTGTCTGCGGGCGCTGGGTC 10942 29 100.0 32 ............................. TCTCGCCCTGTCGGTCGGTGACATCGTGCTGA 10881 29 100.0 32 ............................. GGGCGCGCGCCCGCGCCGGCCGTTCTGACCTT 10820 29 100.0 32 ............................. TGAATCGGGTCCGGAATGATGGCACGCCTCGT 10759 29 100.0 32 ............................. TCGATGTAGTCGAGGCCGCCGGGGGCGAAGGC 10698 29 100.0 32 ............................. GCGTCCCAGACGGCCATGGCGCACCACGGGCC 10637 29 96.6 32 ............................G CCGATCCACGTGCGCGCGGGCGGTAGTTCGTC 10576 29 100.0 32 ............................. CCGAGGGGGCCCACCGCCCCTGCGTCGAAGAC 10515 29 100.0 32 ............................. AGAGGCGTCAGATCGTGGCCGACCTCTCCGAT 10454 29 100.0 33 ............................. GCCCGCTGGGTCGCGCTGATCTGCCTGGGGGGT 10392 29 100.0 32 ............................. TGCGGCATCCGGTCGACGTAGTCGAAGACCTC 10331 29 89.7 0 ....A.......A...............T | ========== ====== ====== ====== ============================= ================================== ================== 26 29 98.9 32 ATCGGCCCCGCGCTCGCGGGGATTGCTCC # Left flank : CGACCCCACCGCCCCCGGCGCCGAAGGCCTGGAACAGGCCGCCCGCGACATCGACGCCACCCTGCTGAGACTGCTCGCCTCCGGCCTCAAGGACGAGACGATCGCCCGCCGCCTGGGCATGTCCCTGCGCACCGTCCGCCGCCACGTCGCCAACATCCTCGAACGCCTCGGCGCCGAGAGCCGCTTCCAGGCCGCCGTGATCGCCACCCGCACCGGCCTGCTGGACACCCCCACCACCTGACCGGTGACGGCCGCCCGCTGCCCTGACGGGGCAGCAGGCGGCCGTCACCGGTCAGCGTGCCCCAACCAGCCTCCCGGCCTTGAGCGGGCACCACTGCCACCGCCTGCGAGTACGCTTCGGAAACGAAGGCCACGACACCCACAACACGCCTGGGATCAAAAAGACATGCCCGATGGACACCACCCGCTCCACAAGCCGGTGACCGATCGAACTGAATCAACCAGCCCCCTCTGACACCCAACACCCCAGGTCAGGAAGT # Right flank : CAGTCTCGCCCCCGGCGTCGGGTCCCGACGCCGGGGGCGAGAAGTGGCGAGTGGACTCAGAAGCTGGAGCTTCCGCTGTCCCAACTTCCGTTGTTCTGGCTGCTGTTGTCCGAGCGGGCACGGACTCTGGGGCAGCATCCAGGGCTTCGCCAACAAAGCCGTCAACAAGGTCGTCCGTGTGGCGAGTTCGGCCTGGAACACGGGTGACCAGCCCCGCTGGCTCCGCCTACCACGCCGCCACCGGCTGGGTCGCGGAGCCGGGGTCGGCCGAGGTGCGGGGGGCGATGCAGGACAGCTCGGCCGTCGCGGCGGCGAAGGTGTCCAGCCCGTCGGTGGACAACGCCGTGCCGTACGCGAACACGCTGGTGGTGCTGGCCGCCGGGAACGTGTCGGGCCCGTACCGCCGTGGCGGTACGGGCCCGCTCCATCGGCTACAGCCGGTCGCGTTCGCGGGCGACGAGGCCTCCGCCCCGGCGTCCCGGTGCCCAGGCCGTCACGTG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCGGCCCCGCGCTCGCGGGGATTGCTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGGCCCCGCGCTCGCGGGGGTTGCTCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [26.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 537-142 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFLNG010001005.1 Streptomyces sp. FH025 1005, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 536 29 100.0 32 ............................. GCCTACGGCTGGAGCTACGCCGGGTACACCAA 475 29 100.0 32 ............................. AAGGTCACGACGCCCCGCCGCCTGGACGTCCA 414 29 100.0 32 ............................. CGCCAGGTGTCACCGTCCCGGTCGCGGTAGCC 353 29 100.0 32 ............................. GCCGGCGGATACGGGCTGGACCTGCCGGAGGC 292 29 93.1 32 .......T................A.... AGCGGCTCGACCCGCTGCACCGCCGGGCCGAC 231 29 100.0 32 ............................. CTGTCGCGGAACTCGCAGAACGGCTGCTCTGC 170 29 89.7 0 ................T......C....T | ========== ====== ====== ====== ============================= ================================ ================== 7 29 97.5 32 GTCGGCCCCGCGCTCGCGGGGGTTGCTCC # Left flank : GCTCTGGCAGCCGCAGTTACCGCCCGCGCCCTGGCTGCCTCAGGCGACTCGGATGGAGCTTCACGAGCAGTAGACGACGTCCGTACCCTCGCGGAGCGCCTGGACGGAGCCGAGTCGGCCGACACCTGGTTCGGCTACCCCGAACAGAAGCACTTCGTGCACCTCTCGCAGGCGTACACCCTGCTCGGCGACTCCAGCAACGCCTACTCCGCCCAGGAAGAGGCCTTGAGGCTGACCGATTCTCCGTCTGTCATGACGCGGGCACTCTTGGCGATGGACACCGCCGCGTGCCTGCGGGTCGAAGGCGACCACGCCGGGGCGTCCGCGATGGCGGTTGGTGTGTGGGAAAGGCTGCCAAGCGGATACCGGGAAGGGCTGATTCGGTCACGCGCATCGCTTCTGCACGAGAAGCTCGACGGTCGCGCACGCAACGAACTGGGTGAAGTACTGGCCGACAGCTGATCCAACAGGCATGTCGGCACCCCGAGCAGTGAAGCGCC # Right flank : TCCAGGGCAACGGAGCAGGCCTTGCGGCTGTGAGTCGGTCGGCTCCGGCCGAAGCGGCGAGGTGGTTGCGCGGGGCACCACTGCGCCACCCCGCGCCCGCCGGGCGGTGCGGTGGAGGGTGACCGGAGGCGGGGGCCGTCGT # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGCCCCGCGCTCGCGGGGGTTGCTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGGCCCCGCGCTCGCGGGGGTTGCTCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [26.7-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 3974-3089 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFLNG010000064.1 Streptomyces sp. FH025 64, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 3973 29 93.1 32 ..A..A....................... AACGTCCCGCTGTTCGCCAACCGCAGCGACGC 3912 29 96.6 32 ...........A................. CAGGCCGCGCACGTGGCGTTCCGCCGTAAGCA 3851 29 96.6 32 ..........T.................. GAGCCGGCGTACTGGTGACGGTCGCTCCACGC GG [3833] 3788 29 89.7 32 AC....................G...... TACGGCCCGCAGACTCAGAAGACTGTCGCCAA G [3771] 3726 29 89.7 32 C..A.T....................... TTGGGGACGGTTTCGCGTCGGCCGAGCGGCAG 3665 29 89.7 32 ...A.......A..........G...... CGTCGGTTGAATACGGTGTCGTTGTTGGGGTC 3604 28 93.1 32 ....A.................-...... TTCTTCACCTACCAGCCGGCTTTCCTGCTGCG 3544 29 100.0 32 ............................. TCTTCACGGGTCAGAATGGGTTCATCGGTGGT 3483 29 100.0 32 ............................. GTGATGGTGGACGCCCTCGGCGCGTTCCTAAA 3422 29 82.8 32 A..........A...A.....A......G TGCCGGATCGTCAGCCTCGGCGGCGCCACCGA 3361 29 93.1 32 A.......................A.... GGCTTCGTGGTCGGCTTCAACGTCCCGGCCGC 3300 28 89.7 32 ........T........A....-...... CGCGGGTCCTTGAGGGTGCGCACCAACTCGTT 3240 29 100.0 33 ............................. GGCGAGTGGACAGGCATGCTCGACCCTGATCGC 3178 29 89.7 32 A....................A..T.... GGATCGGTGGCTCCAGACACCTCCCAGTCGTT 3117 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 15 29 93.6 32 GTCGGCCCCGCGCTCGCGGGGGTTGCTCC # Left flank : GGACGGCGACGCCGCCGATGCCCGGCGCATCGCGGACGCAGCACCGACGCGGGCGGCGCGGGCCATTGCACTGGCTGCTGCCGCCCGCGTCCTGACGGGGACTCCGGCAGTCCTGCCCGTCGAGGAGCCGGAGGACAGCGCCGTGCAATTCTGCCTCACCCTCGTTCATACTCGGGGAGGCCGTCCCAGCCGCACAGACGCGGACAGGGCAGCAGCCCTTGGCTTCCTCCGGGAGCTGCTCGCCGACGGGGGTTGGACGCAGGCGATCCCTTTGCTGCCCCAACTGGTTCCCGAGTCTTTGAGCCCCCTGAGTAAACTAGTCACCGCATACGTCAGCGGACGCCCAAGCACCTGACGAAGGCGGTCACGGCTCTCCGATGAGACTGGCCGCCGCTCGCTCCTGTCGTTGGCCATCCGTGGACGTGACTCCGCACGAACCAAGGAAGCCCAGCAGAAGAGGAGAACTATCCGGGGAAGGGCCTGTGAGCCACAGCCAAGGA # Right flank : ACAGAGCCGCCCCCAAGAGGACGTACTCAAAGGCGGCCTTGCCATTACGGTCCGTCATCTGGACGGGTCGGCTGACCTCGCGACGATGGTCGGCGGTCTGAGCCCAAATCAGATCCAGGTGTAGTTGGCGTTGGTGATCTCGGGCAGCCCGAAGGACACCACGGGGGCATCCGGGGCCGCGAGGGCGGCGAGGGCCGAGCCGATCGGCGGGAAGAGCGGAAGATCGGTGATCTTGCGGTAGTCGATCCACTCCACGTGGCCAACCTCATGGCTGCCGTCCGGGAGTTCGTCGTACTCCTCGGTCGCCAGCTCGGCGCGAATCTCCGGTGTGATGTGCACCCGGTAGAAAAGGTGGACCTTGCGCGGCGACGGGGTCGGGCCGGGCCGCTCCAGGCGGGCATCCATGAACCACATCAGCTCGGCGCCGGCCACGTGCTCCGGCTCCAGGTTCAGTTCCTCCTTCAGCTCGCGGGCCAGGGCGTCGGGCAGCGCCTCGCCGG # Questionable array : NO Score: 5.30 # Score Detail : 1:0, 2:3, 3:0, 4:0.67, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.37, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGCCCCGCGCTCGCGGGGGTTGCTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGGCCCCGCGCTCGCGGGGGTTGCTCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [10-16] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [31.7-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 16080-14771 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFLNG010000064.1 Streptomyces sp. FH025 64, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 16079 29 100.0 32 ............................. CTCGTCTCCGCCTACGAGAACCCCGTCCCGGC 16018 29 100.0 32 ............................. GGCGGTGGGCCCGAGTCATTCAGGGTGGAAAT 15957 29 96.6 32 ............................G TACCGGCCGAGCCGGTGCCGAGGCGACCGGTT 15896 29 96.6 32 ............................T ACGCCAGGGATGCCCCGAAGCGGCTTGAGGCT 15835 29 96.6 32 ............................A CCGCCGCGCTGTATAGGACAGCGGGTCTCGCT 15774 29 100.0 32 ............................. ATCGCCGCCTGCCGGTCCTGGACCGCCCAGGG 15713 29 100.0 32 ............................. TCAGGCTGGGGAGCCAGAGTGGGTCAGTGGGC 15652 29 100.0 32 ............................. ACCGTCAGGGTGTAGGGCTCCCGGACGGCGAG 15591 29 100.0 32 ............................. GCCGGCGCCTACAACCAGCAGCTCACCTCCAG 15530 29 100.0 32 ............................. TCTGTCAGAGGCCGCTGACGGTGCGCGCGCTG 15469 29 100.0 32 ............................. CGGGCGGTCAGCTCGGGGAAGAGGGCGGCCAG 15408 29 100.0 32 ............................. GACTGCTGCCGCACTCGGTCAGCGGATCGAAA 15347 29 100.0 32 ............................. CGGCTCGTCACCCCGCACGCCTGGATGGTCGT 15286 29 100.0 32 ............................. GTGCCCGAGGCGTTCGCGTCCGCGCCGGAGAG 15225 29 96.6 32 ............................T CAGCCCGGCGGCTTCGAGGTGGCCGAGGTGGG 15164 29 96.6 32 A............................ GCCTCGCAGGCGGTCATCACGTACAAGCACCA 15103 29 93.1 32 A...........................T TGGACCGGCCCCGGGTAGAGGGCATGCCCGCT 15042 29 96.6 32 A............................ GACCAGTAGGGGACGTTCTCGTCCTTGATGTC 14981 29 96.6 32 A............................ GGCTACTCGCTGTCGATCCCGGCCTGGCTCGA 14920 28 86.2 32 A....................-..A...T GATCATCAGCCAGACGTCGTGCTCGTCCTTGT 14860 29 96.6 32 A............................ GGTGACGGGGGCACAGCGGCCGAGGCATAGGG 14799 29 93.1 0 AC........................... | ========== ====== ====== ====== ============================= ================================ ================== 22 29 97.5 32 GTCGGCCCCGCGCTCGCGGGGGTTGCTCC # Left flank : ACGCCATCCGCGCAGGCGACCCGGACGCCGCCGCCCGTGCGTGGTCGGACACCGCCATCCGAGTCGCCGTCACCATCGAGGCGCACCAGGAGACGGCCGGCCGCACCTGACCAACGGCCCCGTGCGGCCCGGGACTCCAACTGAGCCGCCTCTCAGCAGTAGCCAGGCCCCCCAGCGAAGAGATCTCATCGCATTTCCTGAGGAGCACCCCCCTGCACGTGTAGGGCCGACCAAATCGCCAGACAACCTCCGCCACCGCAGCGGTATCCAGCATGTGCGACAGCAGGGCCCAACCAACCCATGACCTCGGGCAGATACCGCCGCCACCGGCCCTCAACCTCCGCGCGCGGGTACGCTTCGAGAGCGTGGGACACTGCACTGACAACTCACCTCGGAGCAAGGAGAGATGAAGGCGGCACATCAGCTCCTCTCCGGGCCACCATCCAATCGAACTGAATCAACCGGCGCCCTCTGACGCCAATCTCCGCAGGTCAGCAAGT # Right flank : ATCAACACGGTCGGCCTGCCCGGTGTCCACGAGTCGGCGCCGCGCTCGATGCTCCGGGCTTAACCTGGCTTCAGGCCGATGCCATGGATGCGTCGCGCCAGGTTGCGGCACGTCTGTTCGGCCCAGAGACGCGTGTGCTGACCGCTTCGGAGACGGTCGCGTATCCCGGCTAATGGCCCTCCGGCAAGCTCGAATCGTCCACTTTCGCAGACAGCACCGCAGACCAGGACGCACTCTCCCCGGAGCAGATCCTCAGCGCCGGAACGGCATTCGCAACCACCTGGTTCGCGGACCAGATCACCGAGGCGAAGCCAGCCCTCGCCCCGGTCGGCCCCAACAGCGAAACACAGTTGCTCAGTTACCGGCGCTACAGCAGCGACGGGGTCCTGTTGCCCATGCGGCTCGACATTACGATCTCCACCTCCGGCCGCATCATGGCATCGACTTCCAGCCGCGTATCCGCCCCCCAACTGCCCCGCCCGACCGTCCTGGTGGACGCA # Questionable array : NO Score: 5.93 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.79, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGCCCCGCGCTCGCGGGGGTTGCTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGGCCCCGCGCTCGCGGGGGTTGCTCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.00,-9.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [26.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //