Array 1 36539-37335 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAIQL010000022.1 Anaerostipes hadrus strain MSK.13.2 NODE_22_length_49046_cov_151.375, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================================== ================== 36539 30 100.0 36 .............................. GTTGATCCGCCTATATGGTCCGAGACTGTTATATCC 36605 30 100.0 36 .............................. GCATTTACTGGAACACCTTTTCCGTATTTAAAATCG 36671 30 100.0 38 .............................. ACAAACATTACATCGCCGTTTATTGTAGCTGTTCTTAC 36739 30 100.0 37 .............................. AAAAATTATATTGTGATCGATATTGAAACAACTGGTT 36806 30 100.0 37 .............................. TTAGCATTACTTTGTTCATATATCCTCCACTTCTGAG 36873 30 100.0 36 .............................. CATTACGACAGTGGTAATTACACGAATACGCCAGTG 36939 30 100.0 37 .............................. TTGTTTCCGATAAGATTTTCATGCAAGTGTAGTAAGT 37006 30 100.0 37 .............................. TAAGATTGTATAATGTAAGCAAATCTGCCCACACAGA 37073 30 96.7 36 .............................T GAGCAGGAAGCAGGAAATTGAGCATCCCCACTCCAA 37139 30 70.0 58 TT..........T....T.....AA..TTA TATTGGAAATATAGATATGGTATAAAAGTTATTATTAGTTATATAGTAGGCTCAATCT 37227 30 86.7 48 .........C...A.........G.C.... TAAATTTGGGGGGATATTATAAAAAACATGAAAACAGAATTTTTATGG G [37255] 37306 30 73.3 0 A..A........TTT..T..A........T | ========== ====== ====== ====== ============================== ========================================================== ================== 12 30 93.9 40 GAATTAATAGAAACATAATGGAATTTAAAG # Left flank : GGAAGGTGGATGTGTTGGTGAATAAGAAGGATCTGTCTAAGGTTGAGAGGAGTCAAATTGAGGATATTGTTGTTAGGAAGGTGGGGTGCCAGTTGGGGGATGTGGTGATTAGTTCGATTAAGACGGAGGAGTAGAAGTGTATATGGAATAGAGGGTTTGGGTTCTCTCTGGATGATGTTCTTGGGTAATTTTGGAATATTGTTCAGAGAGAATTTTATGTTTATATATGGATTTGTATATTAGGGTTGCATATTTGATTGATTGGATTCATAATAGGAAGTGTCAAGCTAATAAAAAACTTGATATGATAAAAATATAATGATTTCTGTCGACCTGTGATAGTGTAAAAAACGTAGGGAATCGACAGAAGTAAAAAATGGCTAAAATAGGAGGTGTTGCTAAAACATATGATGAAGAGTGAGAAAGAAATGATATATTTTGAAGAGGTCGACAGAATAAAGGTGTTTCGTGGAGTAAATAAGCAGTTGGTTTTGGGACGG # Right flank : TTAGTATAAAAAGTTTTCCAATATGGACGATTAATATTAAATTTCATTGGTATAATTTAAATTTCAATATGAAAAATTACATTGATATTATAATAGATAGATTTACAAAAAGCAATAACAAAATAAAATATAAATATCATTAATATAAGGGTTGACTAAATATAAGTGAAAGAGTATTCTAAAAACAGGAAGGAGAAATAACACCTATGCGTTTAGAATTACAGATGGAATTATTGAAACCAGAGATAGATATTGATTATCGTAGAATCATAATATCTTATCTAAAATTTGCATTAGAACATTGTGAAGGGGGAAGATTTTTCGAAAAATTTTATAAGAATCGAGATAACATAGTTAAAGATTATTGTTTTTCAACAGTTTTTAGTAAGCCACGATTCACGAAAGAAAAAATTTATTTTGATAAAAATGAAATGAAAATCATATTTTCATGCAGTGATAGGAATCGAACAGGATTAATTTTCCAGACAGCATTTTTAGCA # Questionable array : NO Score: 2.86 # Score Detail : 1:0, 2:0, 3:0, 4:0.70, 5:0, 6:0.25, 7:-0.09, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAATTAATAGAAACATAATGGAATTTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-23] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 1 3900-498 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAIQL010000067.1 Anaerostipes hadrus strain MSK.13.2 NODE_68_length_4681_cov_148.148, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 3899 30 93.3 37 C.....G....................... GCCATATAACCACCTACTTAGCCATTACTTCAAAATG TAA [3881] 3829 30 100.0 36 .............................. GTTGTTTGCTGCTTTGAACATTTCTTCTGATATAAT 3763 30 100.0 34 .............................. AAGATAGTCAATAAGTTCAAATGGATCAGAAGTA 3699 30 100.0 37 .............................. ACTAATGGGAAGACTGACTAGAAAGCCGGACATAAGT 3632 30 100.0 36 .............................. TCAATGTACGCCATGAAATCACTCCTTTTTATCCGT 3566 30 100.0 34 .............................. GGATCAATCGTTGCATATAAGGACTCTCATTAAG 3502 30 100.0 36 .............................. AGCTTTATAAGATTCAAGAGCTTCGATCACACATCT 3436 30 100.0 36 .............................. GCAGATAACCTTTTCAAATGAGGGTAATATAGCAAT 3370 30 100.0 35 .............................. CCTAAAGTGTATTTTAAAATTTCTCTATATTCTTC 3305 30 100.0 35 .............................. CTAATCACCTTTCCTTTTTACAAAATATTAAAATT 3240 30 100.0 36 .............................. CGAAGTAAAAGTAATTGATTGGGAAGCAGGAAAGCT 3174 30 100.0 35 .............................. CTAATTAGAAAAGGATACGACATTTCGCCATATCT 3109 30 100.0 37 .............................. AGATTGATTATGTGCGTTGTACTGGGTTTATTAAAGA 3042 30 100.0 36 .............................. TTGGAAGTATTGATAGAATCCCCTAACACCTTTGAG 2976 30 100.0 36 .............................. GCTATGGTTCGATGGAGTTAAGGACCTTCTGGACGA 2910 30 100.0 36 .............................. GACTGCGATCGGAGACATTCGATGCAAGTCAGGATA 2844 30 100.0 36 .............................. CACGTATGCCACTTTATTTCGCTTTATTCCAATCAT 2778 30 100.0 37 .............................. TGAATGTAACCGAAATCATTACGGGAACGCGTATGTT 2711 30 100.0 36 .............................. CGTTACTCGGAACGAGTGTTGAAGAGCTAAAAGAAA 2645 30 100.0 37 .............................. TAGAAAGCTTAAACCAGTATGGAGAAAGGAAACAGAA 2578 30 100.0 35 .............................. GATTTTTGTATCGCAACATCTAACAATTATGTTTC 2513 30 100.0 37 .............................. AGATGAAGAAAAGGAGGAAAAATAAATGTCAGCAGCA 2446 30 100.0 35 .............................. GAGATTCAAAATGCTATCAATTCGTTAGCGTCTAC 2381 30 100.0 38 .............................. GCACAGTTTGAGGGTATATTTAATGTTACGATACCAAT 2313 30 100.0 35 .............................. AGCTTGCAACGGTGATTGGAATGCGTATCAAGGTC 2248 30 100.0 36 .............................. GATTGAATCTTTTGAATATGGAGAGGAAGATAGTAC 2182 30 100.0 37 .............................. ATAAATTACATATCAAATTTACGATCATAACGGACTA 2115 30 100.0 35 .............................. TCCGGCTCTGCTTTCTTCTTAATTGGATCAATAAA 2050 30 100.0 38 .............................. ATAGTTCTTGTTCCCTGTCAGTCTTATGTGACTTTCCA 1982 30 100.0 38 .............................. ATAGTTCTTGTTCCCTGTCAGTCTTATGTGACTTTCCA 1914 30 100.0 36 .............................. AAAAATAGCAGAAGAAGCAAAAAAACAGTGTATAGA 1848 30 100.0 36 .............................. AGAAGATAAGATTAATCATACGACAGAGTTAGACGA 1782 30 100.0 35 .............................. ATGATGATCGGGCGGAGTATCAATCTATCTGCGCT 1717 30 100.0 36 .............................. AATGAAAGAATTAGAAATGAAGGAGGACTTAAACGA 1651 30 100.0 35 .............................. AGCTTGCAACGGTGATTGGAATGCGTATCAAGGTC 1586 30 100.0 35 .............................. CGGATTAGCAGCCAGTATCGCATCTGTAATTATGA 1521 30 100.0 37 .............................. AAAAAAGGAGTAAACGTTGAGTGACTATATTTACATA 1454 30 100.0 36 .............................. TATGAGCGAGCTGATGAAGAAATACGGCTACGAGAA 1388 30 100.0 36 .............................. GTATTGGCTAGCGTAGTTGCCTACTACCTATGCAAA 1322 30 100.0 36 .............................. AAAAGATGCACTTGTAACTCAATATGCCGAATTGAA 1256 30 100.0 35 .............................. TTACTCATATCTTCTTTCAAGACATTTAAAACCAA 1191 30 100.0 35 .............................. CGAACGCTGTGATCGATTACGGACGAGAAAAAACA 1126 30 100.0 39 .............................. CTATCCTCATATTCACAGCCTTCATCAGCATAAGACTCT 1057 30 100.0 36 .............................. CTCTGATCACGAATTGGCGGTGCAAATACCTTGTAC 991 30 100.0 36 .............................. ATATACGAAGTAAGCATCGGGAACGATGATAATTAT 925 30 100.0 37 .............................. GATGGAAATGCAGCAGCTACAAGCTCAATGTCATTTA 858 30 100.0 37 .............................. CTTCTGGAACAAAAAAACAAGTTGTAATCCCAACACT 791 30 100.0 36 .............................. AGGAGCTTCAGGAGAAGTATGATCTTCTTGATGAAA 725 30 100.0 35 .............................. AATTTACATCTAACACAGTTTGTAGATTATTTCAC 660 30 100.0 37 .............................. ACAGGGCTTGACAATCTGGCAAATGCCATCTTTGCAC 593 30 100.0 36 .............................. AATTACTCCATCTTCGATAATAGCGACAGCGTCACC 527 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 52 30 99.9 36 ATTTAAATTCCATTATGATTCTATTAATTC # Left flank : CTGATGCGAAATTGCAGATTTTGTTACCCCCAGTAGCACTGCAAGATCACATACACACATCTCACTCTGTTCTAGAGCGTGTAAGATTTGTACTCTAGTTCCATCTCCAAATAGCTTAAACAAAGAAGCCAACTGGATATAATCATCTTTTGGCTGCATCTTGGATTTCACATCATTCACAATATCCTCATGAATTACATCGCAATTACAAATATAAGACGTTTTTGGCATATATTCACCTCCAAATAATAATAGTTGAACAATTACTCAACTATTATTATACTTATTTTTAAATTCATGTCAATAAGCTGATGTTAGTTCCCCATAAATTTTACAATTAAAACCAGCTCTTTATTCTTTTCTTTATCACATCTCATTTCTGGATTAAACGCTTATTTTAATTATCAGATTTTTCCTTCTAATCTATATTCTTAAGGTTCCAGTTGACTCATTTGGTCCCAAGTGCCTTAAGATTTCCAACCTGTTACATTGAAATCCAT # Right flank : CCCGTCCCAAAATCATCCCCTTATTTAAGCCAAAAAACGTCTCTATTTTGTCGACCTCTTCAAAATTCAACATTTCTTTCTTGTCCCTAATCATATATTTCTGCAACACCTCCTATTTTAGGCGTTTTCGCCTTCTGTCGATCCCCTATATTTTTTGCACTATCATGGGTCGACAGAAACCCCCTAATTTTTCAAGTTGATTTTGTTCGACACATTCTATTATGAAACTTATTTGCTAAATATGCAAGTTAAATACACGCATTCATTATATATACTTTTCGAGCAAACACTATACAGTCATATATGCATCAAATATCACCGTCTGAATAATCCAATTTATCGTCTGAATAATCCAATTTATCGTCATTTTTATAAAAGTCATGCCCACGCGAGAAAATTTCCGTGGGCATGACGTGGGCACGGCTATTTTTAGGCTTATTTTCAATCAAAACCACCGGCTTAGCCGGTGGTTTGTACTAGCCCTATAAGGGCTTATTA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTAAATTCCATTATGATTCTATTAATTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:83.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [58.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 7118-7544 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAIQL010000013.1 Anaerostipes hadrus strain MSK.13.2 NODE_13_length_67817_cov_162.42, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== =================================== ================== 7118 31 100.0 35 ............................... TAAGTTGTTTCTCTTATCTACTCTAGTAATGTTTT 7184 31 100.0 35 ............................... GCATTAACGGTACCGATGCATACTGGTGTGGTTTT 7250 31 100.0 35 ............................... CTAAAATCATGGGAAGTATCCCATACCCTCGTTTT 7316 31 100.0 35 ............................... CTAAAATCATGGGAAGTATCCCATACCCTCGTTTT 7382 31 100.0 35 ............................... CTAAAATCATGGGAAGTATCCCATACCCTCGTTTT 7448 31 100.0 35 ............................... TTTAGAAAATTCATTCGATATACCGTCTATGTTTT 7514 31 100.0 0 ............................... | ========== ====== ====== ====== =============================== =================================== ================== 7 31 100.0 35 GTACCTATGTTATTCCTCATAGGTCTAAACC # Left flank : AAACTAATACCTTATAAGTATAACAAATTCTGTTTGATTTTTCAATATATGAATAAAAATAGTGAAATTTATAAAAACTATTCTATATTTAGTATATTAACTCGATCTATAAATTCTTTCATATCTTCCACATACTCATATGGAGCATATTCTGAATATATATCTGGATCATCTAAAATAACTATTTGCACCCCTTCCGCCCTTAATGCTTCCAATGTTCCTGGTAAACATCTAGCTTCATTTATTGTCTTACATCTATATGCTATGCAACCTTGCTGATCAAAAATTTTAGCTATTACATATATTGATTTATTGATCATTTTTTTCTCCTTCCAATTCCTTTAATGTTTTTACAAATTCTTCTTTATTCTTTATTTCTTCTTTCATATATTTATGTTATTACTCGCACTAATCTAGTAAAGATTCACTTTTGAGGATTTATACCTATGTTATTTCGTATAGACCTTCTTTCTGAACAGTGTCAAATATTTCTTTGTTTT # Right flank : CCTCAAACATAGATTTTAGTGAGTGCTTTAAGCCTCACCATTTGGTTGCAAAATCAACCATTTTATATAAAAATTTTTATTACTATTTATGACTAGCTTCTCAAATTATTTTGTATTTATATTATGCTTTTGACTATATAATCATATAACATTTGCATTTTTAATATTTTTGTTAAGTTATGAATGCATTTTATAAATTTTAATGAGTGTCATATAACCTCACTTTCAGCTGCAAAATCAACTGTTATCTTATTTAGTATACTATGAATTTAGTAATTTTTCTATTTATTTTTATATATATCAAACTTTTTCATAAAAAAAACCAGAGATTTCTCCCTGGTTTTTTGTAACAGATAAATTTTTATGAAGATATTCTGTTAATTCAGTTTTTTGTTATTATTTGCTTTCTCCTATTCTCATAACCTTTCCTGTAGAATCATCTATAGAAAGCTCTTTTTCTAATTCCATTTCATAAAGATACAGTTTTTTTTCATTTACAG # Questionable array : NO Score: 3.06 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTACCTATGTTATTCCTCATAGGTCTAAACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.29%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.90,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [71.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA //