Array 1 27093-23652 **** Predicted by CRISPRDetect 2.4 *** >NZ_SSNM01000007.1 Salinigranum halophilum strain DYF38 Scaffold7_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =========================================== ================== 27092 30 100.0 35 .............................. GCTCTCACGCGGCGAGAGTCAGCGCAGGAGGGATA 27027 30 100.0 36 .............................. AACTGTCGAAGGTACTCGGTGTACGGGTTGGCCGTC 26961 30 100.0 38 .............................. GTCTAGTTCTCTCTCGGCTTTCTCGCGGAGTTTCGAGG 26893 30 100.0 34 .............................. TCGGTCCACGCGACCGTCATCACGGAGTGCACTC 26829 30 100.0 37 .............................. CCGAAGAGGGGCGTCTTGGTGACGCGCTACTCGGCAT 26762 30 100.0 37 .............................. CCCGAACACGCTGTCGAGGGGCAGTCGCCCGAGACGT 26695 30 100.0 36 .............................. GGTACCCGAGTGCGCGTCGGCGTCAGACTGATCGTC 26629 30 100.0 34 .............................. GGAGGGAGTTGGGTCGGCTGGTGGGGATAATCGT 26565 30 100.0 35 .............................. TTCGTCCATCACGGTCGCTTCCGAGAGTGGCTATG 26500 30 100.0 35 .............................. GGTGAATCACAGTGGCGAACCGGCGGTGCGGGGTA 26435 30 100.0 35 .............................. GACTCCGAGCGAAGCGAGGTGTCCCTTATCTTATC 26370 30 100.0 36 .............................. CCGCGTAGACGTCGCCGCCGATAGCGAGCCCGACGC 26304 30 100.0 37 .............................. GCGGATAAGCCCCGACGCATGGGACGACCTCGAGATA 26237 30 100.0 35 .............................. CGAGCGGCGTCCGAGGAGGGCGTGGCACTTGAGGA 26172 30 100.0 32 .............................. GCCGCTAATCGCCGCGCCGATGTCTTGGTGGA 26110 30 100.0 36 .............................. CTCCGAGACAGTACAGGCACTCGTCTTCGTCTTCCT 26044 30 100.0 37 .............................. GCGGCCGCCGCTGGCGCGGCCGTCACGACGAGCGCCG 25977 30 100.0 36 .............................. CAACCGTGTGGCTCGCGCTTGCCGCGGCGGCGCTCG 25911 30 100.0 37 .............................. GTGTCTCGCGTCGTCGAGTGCATCGTGCTCGACGCCG 25844 30 100.0 34 .............................. TGCAACGCCACCACCAACACGAGGCCAGCCGCGC 25780 30 100.0 36 .............................. ACGGGCTTCGACGTGCAGGGCAGTGGTGAGGGAGCC 25714 30 100.0 35 .............................. CTCCCGGCCGCGATGCAGCTCGCCATCGGCGGCCT 25649 30 100.0 36 .............................. ACAGTTACGGCCGGCGTCTTCGGCGATTCCGAAGAC 25583 30 100.0 35 .............................. GGTCAGCGGCGTTTCACAGCCACCGCAGCGTGGGC 25518 30 100.0 35 .............................. GCGGGACAGTGCTCAGGTCGAGCGGGAGGAAGCAA 25453 30 100.0 33 .............................. CTTCCGTATGAACGTCATGCGGTTAGCGAACGT 25390 30 100.0 37 .............................. GTACTCGCGCCACTCCTGATTCGGCCAGACGAAGATG 25323 30 100.0 38 .............................. AACTCGTCGGGAACTTCGAGGCGGACGACGTGTTAGAC 25255 30 100.0 36 .............................. GGCGGTCGCCGACGTCGCCTCGACGATGGTCCGATA 25189 30 100.0 36 .............................. ACGGGTCACATCCACGAAGAGCACGCCGACGAACTA 25123 30 100.0 36 .............................. TTCAAAGACCCAGACGAACAACTCGCTCGAGCTGTC 25057 30 100.0 35 .............................. TTCGACCTGGGGGTGACGATGTCAAGCGTCTCGGG 24992 30 100.0 36 .............................. CTCGACAGCGGAGGCTACAACCGATGATTCTCAACC 24926 30 100.0 36 .............................. TGTCTACTCCTCGGTTTGTTTCACCGGCTACAGCCA 24860 30 100.0 36 .............................. TTTCATCGACCGGAGATAGACCAGAATCCCGAATAG 24794 30 100.0 36 .............................. TGACCCGCCGGTCTGCGACGTCGTCGAGCCGGACCC 24728 30 100.0 35 .............................. TTCGAGAGTGTGAGCAATCCCACTGGATCGACGTC 24663 30 100.0 43 .............................. ACCCAATAACCTGGATGGCAAACCCGCCCCCAGTGATTTTATC 24590 30 100.0 34 .............................. ACGAAACGCTACGGTGGAGCGAGGTAGACGAAGC 24526 30 100.0 34 .............................. TCGATATCACGCCGAGACGGACGCCTTGCTCGTC 24462 30 100.0 35 .............................. AAGCAGCATCCGGAGTTCGCGGGGCACCGTCTCGT 24397 30 100.0 38 .............................. TGCGTTGGGGTAGTCCGTCGGGACGGTCGGTTCGTCGT 24329 30 100.0 35 .............................. GATTGGGCGCAGACAGTTGCCGCACTCGACGCAGT 24264 30 100.0 35 .............................. TATTTTATTTCAGCGGAGACGATACCGACGGCGGT 24199 30 100.0 36 .............................. TTCGGTGTAGCCCTCCCTGTCGAGACACGCAGGGCA 24133 30 100.0 35 .............................. CCCGGTGAACCCCCAGCCCTGCGGGACGACTTGAT 24068 30 100.0 35 .............................. AGAGTCGGCGTCGGCCGTCGGGCTGGATAGCGCGG 24003 30 100.0 35 .............................. GTACAACGGGTCGCACTCGTGACCGTCTAACCAGC 23938 30 100.0 35 .............................. GATACGCGGTTCGACGTCCGCACAGACACCCGCAT 23873 30 100.0 34 .............................. TCGTCTTTGTAAATCGGGAAGGTGAAACGCTCTT 23809 30 96.7 33 ...........G.................. CCGCCTTGCCTCGGTTGATTGTTAGTGTGTCTG 23746 30 100.0 35 .............................. ACGAGAGGTCAAGCGGCTCGCCTGTCGCATCGGTG 23681 30 96.7 0 ...................A.......... | ========== ====== ====== ====== ============================== =========================================== ================== 53 30 99.9 36 GTTTCAGACGTACCAAGCTGGTGTTGAAGC # Left flank : AGTTCTTGAGCGTACGATTAAGCACCCAACGCTGAACAGACACGTGTCGTATCAGTATTTGCTGCGTCTTGAGGCGTACAAACTCCACAAGCACGTTCTCGGTGATCAAGAGTACGAGCCCTTCAGGCGGTGGTGGTAGTGTATGTAATCGCCGTCTATGATATGGAGGCAGACCGAACACAATTGATGTTATCGCTACTCCGGCGGTATCTAACCCACGTCCAGAACTCTGTCTGCGAAGGAGAGCTGACCGAAGCACAGTACGCAGTCCTCACCGAAAAGATTGATGAGACCGTCAAGCCACACGAATCAGTGATTCTCTATCGGCTTCGTGACGACAACTGGCTCGACCGGCACATCTATGGAGCCGATCCGATGGACGATCACCGGCTCATCTGAGTTTCCATCGACCTACTTGAGTGCGGCCGCTACTACAGGTCGATGGAAACCTGTCTCCGAAACCAATAGGTAGGGCGCGCCAGAACGTACATTCAGGCGGG # Right flank : TCTGTCGGAGGTGTAGGACGCCTTCACCGCGGACCGGTTTCAGACGAACTCATATGAGTTGAATACTGGTTCTCGAGACACCCACCAGCGACACATCCGGAAACATCCGGAAATCACCGCTTAGCACCACGGAAGCTCCACTGAGACCCGCCAAGTCACCACTCTCACGGACCTACCGGAACCACCCCCGGACGGCCTATTGAGTCGGTCATCGACCACCCGATGTGTGCGCTCGAGATGCCGGCCGAACAAAAAAGCAGAGTTGCAGCCAGTTTAGCAGTCGTGGGCGACGATCCGCTCCGGTAACCCAACTCGCCCACAGACGGGACACTCAACCAGCGCGTCGTCAAGGTGTGCCCGTGCAGCTTGGCAGTGCGCCCGCACCGCATCGGGATTCTCAGCGCGGGTCTCTGCTTGGGCGAGGGCCATCCGGGCTTGCTCGAGCGCCTCGGTCAGCGACGCCATCAGAGCGCTCCCTGCTCGCGGGCGCGTTCTTCGTC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGACGTACCAAGCTGGTGTTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.00,-2.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA //