Array 1 52963-52266 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABHGS010000004.1 Enterococcus faecalis strain 4928STDY7387826, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================= ================== 52962 37 100.0 29 ..................................... AGCCATTTGCCCACATGCCACGTGCGGCA 52896 37 97.3 29 ....................................T TCCTAAAAACACAGACAGAGATTTCAATA 52830 37 97.3 29 ....................................T AATGTTACAACTAGTTTGTTATTACCATC 52764 37 100.0 29 ..................................... GTTGTTAAACATACAGATATCAATGATAA 52698 37 97.3 29 ....................................T CATTATACCCGAATAACACGCCTTTAAGT 52632 37 97.3 29 ....................................A AATCAACTATCCAGTCGCACATGTCCGCA 52566 37 97.3 29 ....................................A TCAAAAGCAGTTGTGAAGACACCTGAAGC 52500 37 97.3 29 ....................................A AAGCAGCCCATTATTGTTGCATTAGACAA 52434 37 97.3 29 ....................................G ACTGCTATCACGAGCGCTTTACATATATT 52368 37 100.0 29 ..................................... CAAGTTGGTACGATTACTCAAAAATTAGA 52302 37 70.3 0 ......T..C.........A.A..ACAA..T.TC... | ========== ====== ====== ====== ===================================== ============================= ================== 11 37 95.6 29 GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACC # Left flank : GTAACGATGGGGAAAGTAAATGCTGTATTAAATTCAGGAGAAGAACTATACGATGTTTCAGAGGATAGACGTTTTGCTGTGTTAGACATGGGGTTAGAAGATTTAATGAAAATAGAAGAAGTTTGTAAGGAATATAAAAAACCAATACCAACAGAATTTAAATTAATCTATAACGTTGAAACAACAAGCTTTAATACAAAGTATAAATATGACCTTCAATATTCCAATAACGATGCTTTAACTGATTATGATCTCTTTATGTCGTGGTATGAAGAAGTTAAGAAAGAGGTAGAAAATCCACCATTGTAATTTGGATTTTAATAAATTTTCATTTTTTCTATTTATTCGAACAAAAAAATGGCTCTTTGTCAAATAATGTTGGTAAAGAGAAAGTTTGGTATAATGAAAGAGTAGAAACGAATCAATACATTCTAAACTGAAATCTAGCTATGGATAAGTGATGCGAATACGGAATCATGGAGAAAAAATAATTCTCCGAG # Right flank : ACAAGCAATCCGTAATTTTTATCACAAGATTAGAATTTTTATCATCAAAGACGAGCTGCTTCAATTTTCGAAAACTAATCAAGTGATAAGTCAAAATGTTGATAGATTGAGATTAGTTCTTCCTTTTTTTAGGAAGGGCTTTTTTTATTGATAGAAGAAAGGGAAGAAATCTTGGTAGCACCTAAAAAAATTGTGAGAAATGCTTCTGTATTGTTTGGTTTCTGCCTCAGAAAGTTGTATACTTAGATTGGAATTATTCTATATTACATGCATTTTCACACTTTTTGGAAAAGTTCACTTGAATTTTCTTTTAGTTTCGTAGATAAAAGGAGTCATCGCTAATGGAAATGAACAATTCAGGTAAGCTTGTTTCTTTGTGTGGAGGCAAATCAGGGAGGAAATAATATGTTTGATATTGTAACATTGGCGAGAATCCAATTTGCGATGACAACAGTTTTCCACTTTTTCTTCGTACCGTTTTCAATAGGATTAGCACTTGT # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: R [matched GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [70.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], // Array 2 57444-57143 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABHGS010000004.1 Enterococcus faecalis strain 4928STDY7387826, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================= ================== 57443 37 100.0 29 ..................................... GCAGACGTTGCTGCAAGTGTAGGGTCACC 57377 37 97.3 29 ....................................A TCCTCTGATTCAATCAATACAGCATAGTA 57311 37 100.0 29 ..................................... TCCAATTAGAATTTTTTCGCCCAAGACGT 57245 37 97.3 29 ....................................A CATGGCGTGTCTTTTAAATGCTTTTCCTT 57179 37 97.3 0 ....................................C | ========== ====== ====== ====== ===================================== ============================= ================== 5 37 98.4 29 GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT # Left flank : CATATATCCTCATCAAGTAGTAAATGCTTCTTTTGACTTTCAAGAGGGACGAACAACAGAAGGTGGAGAAATGACACACATTATTGGCTTTGCCACTTCGCAAGAAAATACCTATGAAGATTTGGAGCAACTAAGCGTACCTGCTCATACATGGGCGGTTTTTCCAAATGAAGGTCCTTTCCCACAAACATTACAAGAAACCTGGGCAATGATATTCTCTGAATGGTTGCCTTCATCTGGTTACCAAGTCGTTGCAGCACCAGAAATTTCGTTTACGCAATATCAAGGACCAGCAGAAGCTAAGTACAGTGAAATCTGGCTCGCTGTTACAGCTACTAAATAAAGAAAACCCATCATTGAAAAATGGTGGGTTTTTCCGCCAAGAAGGAGAAAGTTTGGTATAATAAACGTGAAGAAAAAAATCAGACCTTCTAAACTGAAATCTAGCTATGGATAAGTGATGCGAATACGGAATCATGGAGAAAAAATAATTCTCCGAG # Right flank : GCACCTAATGCAAAGTAAGGCATCTCTTTGTTTTAGAGTCATGTTGTTATCTTCGAATGAAGAAGAGGAGTGCTAAAAGGTTACTGTTTCCAGTAGCCTTTTTTGTTATTTTTATTTCTTTCATTACCAAAGTTTAGTAAAATGAAAGTATCTTAAATTTTAAGTGAAATAAATTTAATAAAGGAGAACAATGATGGAAGGAAAGATTGTTTCAAGTACGAGTTCAGCCCAAACAGCTGTCTCAAAGTTGATTGGTATCAACGAGCGTTTAGAAGCCCCAAAGGTAACCTTTTCAGGAAGTACAGTTTCAGGAATGACCAAAGGCAAACAAGTGAATGCTCAAGTTTTAACAAACTTAACGGATTTAACCAATTGTGTCTGGAAGCAAGCTGAGAAATTCCCTCAAATTGCAGAAAAAATTGCTTATCGTGACCAACAATCTGCGGAACAATTCCGAGGAGGTGGGCGTTAAGTATGAGTGAAAAAGAGAGAAACGATGA # Questionable array : NO Score: 5.90 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: R [matched GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [61.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //