Array 1 35412-39810 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABMHK010000032.1 Eisenbergiella tayi isolate MGYG-HGUT-02330, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 35412 30 100.0 36 .............................. TCCCACTATTAGATATAGGGGATGATGGCCTTCGGC 35478 30 100.0 36 .............................. ATTAATCGCTCGCTCTGCGCAACAAGAATCGGGGTA 35544 30 100.0 34 .............................. TTTGCTACTTCTCCCGCCAACGATACAGTATGTT 35608 30 100.0 35 .............................. GCTTTTAAGGGCATAAATAAAGAGGGGAATAACTC 35673 30 100.0 35 .............................. TCTTCCATACGCTCAATTCTATCGGATATCTCCTG 35738 30 100.0 34 .............................. GCTATCTTGATGTCCGGAACCTCTCCTACCCGTG 35802 30 100.0 37 .............................. ATGGCTGACTTGTTTGGTGAGTGGGTGCCGGATTTAT 35869 30 100.0 35 .............................. ACGGGGATATGGTCAGGGCAATACTGGACGGACGC 35934 30 100.0 34 .............................. AATAGATCTGGATTTTGCTTTATAAAATACATAA 35998 30 100.0 35 .............................. ATAATATAGTTATAGCGTAAAGCCCTCTTTACTAA 36063 30 100.0 35 .............................. CTTATCTGGCTTATCGCAGCGCTCAAACTCTATTG 36128 30 100.0 35 .............................. CCGAATTTGCAGACAGTAATTGCCCGGGAGAATGG 36193 30 100.0 34 .............................. AGCACATAAAAGACAATTTTTAAGTCCACTGTTA 36257 30 100.0 36 .............................. CTTGAAGTACTTCCTTCCGCCGGCACCGAAATAGTC 36323 30 100.0 37 .............................. AGATTGAGTTTAGCAGCCATCTGGCAAACAGCATACA 36390 30 100.0 35 .............................. GAACTACTGTCCCCTGTTTACCTTCCGCATAATCT 36455 30 100.0 35 .............................. TTTTACTGGCTCCAATGTGATAAATGGTGTTACAT 36520 30 100.0 34 .............................. GGTAATGGTGTAGACGGTACGGAAACAGTGTCGC 36584 30 100.0 35 .............................. TAATGTCGATTCCGATAATGATGCTTTTGAAACTG 36649 30 100.0 34 .............................. GATGATAATTATTGGCTCAAAGAATTTTCTCTTA 36713 30 100.0 34 .............................. TTTAACAAGGCAAACGCAATTGTCTATATACCGG 36777 30 100.0 36 .............................. ATACATTTTCAATCTGACGTATGGTCAGGTCATATT 36843 30 100.0 36 .............................. GATATTTTCTGGATCTCCCGTTCTCCGATCCATTTT 36909 30 100.0 36 .............................. CATAATCGCTGGATTCAAAATATTGTGTTTTCTCCG 36975 30 100.0 34 .............................. GATATGCTGCCATCTGCTCCGCCGTTGCTACGCT 37039 30 100.0 37 .............................. TTCGGCAGGAAGGCCTTAATCAGCTCACCATTTTTAA 37106 30 100.0 36 .............................. ATTACTGAGATATATCGGGATAATATACAGGTATTC 37172 30 100.0 37 .............................. CAGGATATATCTCTCTGCAAATAAATACCCCCAGGAA 37239 30 100.0 36 .............................. GGTGTTTCTTTTATGGAGCAGTGCGAATATAAAAGA 37305 30 100.0 35 .............................. TTCTTATCTCCCTTCAAATATTGCCAGGTATGTAT 37370 30 100.0 34 .............................. TAAGAAAAGGGCCACGCATTCGCATGGCCCAAAC 37434 30 100.0 34 .............................. ACAATATGTATAAGCAGGGCCTTACAGCAGCGAT 37498 30 100.0 36 .............................. TATGGTTTGAGGAACTCGATCAGTTCGCGGGGCCGG 37564 30 100.0 37 .............................. TTGCATCCAATTTCATAATGGCAGCAATGATATTCAT 37631 30 100.0 34 .............................. AAGACGGGCGTTTCTGGCGTAGCCGCCATGGAAC 37695 30 100.0 36 .............................. CCAACTTTGGCAGTGTAACCAGAAGCTACCGGCGTT 37761 30 100.0 34 .............................. AATTGTGGGATTATATTTTACGAACTCATAGGTT 37825 30 100.0 34 .............................. CGCGACTGGTAACCGGTAGCGGAGTGTACACGGA 37889 30 100.0 37 .............................. TCGTCTATTGACCTTATAGTGTATGTTTCTCCTATAT 37956 30 100.0 35 .............................. TTGAAAAGCAAAATGCTTTATCGACACATGATAAT 38021 30 100.0 34 .............................. CCACCTCATAGGCGCAATCCTCTCCCAACGTGTC 38085 30 100.0 34 .............................. GAATGTGAAAAATGTAATTATGGGTCTTTAGACG 38149 30 100.0 37 .............................. GGGTGTGGGGAACCGGATGCACCGCTGGACAGTTTCC 38216 30 100.0 34 .............................. GATAATAGAGAAATATTTGTTCCGCCAGAACCAA 38280 30 100.0 35 .............................. AATGATGAATCATTTATATGTTGGGATCGTGAAAA 38345 30 100.0 34 .............................. TCTTTTGCATTATCCTTATTTACCTCTCCGGCAT 38409 30 100.0 34 .............................. TTATTTATCCTTCCAATCCCTGTAGGGTTATATT 38473 30 100.0 36 .............................. GTTTTCTTCTTGTCCTCAATCGATGCTAAAAATTTA 38539 30 100.0 34 .............................. ATGACTATAATTCCATTGCTGGTGAACTTGGTGG 38603 30 100.0 34 .............................. CCTTCTCCCATCTGTGCGCTGCTGCACACGCATA 38667 30 100.0 35 .............................. ATGCCATATTGGTGTTTGAAAGCAACCCATATACG 38732 30 100.0 36 .............................. TGGAAGGACTTAATGCGTACGGACTTTGTATTCCGG 38798 30 100.0 35 .............................. GTATAGGTGGTATTATTGTCTGTCCCCCATTCTGC 38863 30 100.0 37 .............................. GGTTATGATACAATTTGCCATGAGCTCCTACATTCCC 38930 30 100.0 37 .............................. GAAGGAGGATGTGGAAAAAGCACTGAAAGCTCTGGCA 38997 30 100.0 36 .............................. GTTCCACTCTGGAAGGTCCTTCTGTTTTTTCTACCT 39063 30 100.0 37 .............................. TGGAGATTGGACAAGAAGTTAAGGTTTCCTTTGGGTA 39130 30 100.0 34 .............................. TCTATTCCCTTACCGCTACAAAAATCCGAAAGAA 39194 30 100.0 35 .............................. CTTCTTCGATCGACTGCCCCATTAGAACATGATAG 39259 30 100.0 36 .............................. GCACCAATGAGGCTACGGAGCTGCTGGGATGTTCCC 39325 30 100.0 36 .............................. CAGGACCGGATGAGGGACAGCGCTTCCGTATTCGTT 39391 30 100.0 37 .............................. AGCTGAGATGCCAGCATCTTTTTCTTATCTGGGTATA 39458 30 100.0 35 .............................. AATACAGTTACTATTCCGGTGGAAACCGGAAAAGA 39523 30 100.0 35 .............................. GAAGTGGAATATGTGAAAACAAAACGGGGATCCGA 39588 30 100.0 34 .............................. AAGGCTGCGCAGGCATCCAGGATCGGTTTTATAA 39652 30 100.0 34 .............................. GCCACCAGCTCCACACCCGACACCAGGCTTAAGC 39716 30 100.0 34 .............................. TCAATCAAGACAACTGTTCCTTGTTTTCCCTCTT 39780 30 100.0 0 .............................. | T [39808] ========== ====== ====== ====== ============================== ===================================== ================== 68 30 100.0 35 GTTTAATAGTAATATAAGATATTTTGAAAT # Left flank : CATTGAAGGAGAATATTTAATGAAAAAACAGCTTACATATAATTATGCGTTTGTCTTTTATGATGTAAATGAAAAGAGGGTTCAGAAGGTTTTTAAGATTTGTAAGAAATACTTGTCTCATTTTCAATTTTCTGTTTTCAGAGGAGAAATAACGCCTTCCAAGCTTATTGAACTAAAAACAGAGCTGAATAAAATAATAAATAAAAATGAAGATTTTATATGTATAATAAAACTAATGAATAATAATGTTTTTGGTGAAGAGATATTAGGGAAAAGGGATGAGGTAACAGGAGAAGATTTGATTATTTGAAAAATGGTATATGAAATTTACCAGGCGCAAAATAGGAGTTTGTATGTGAGATGGTTGATTTTACTGGCATTGTAGGTGTTTTTGATATGTTGATGTCTGGGTGGGGGCGGACTTGGTAAAAAAGCTGGAATTGGTTGTATTATGGGGATTTATTTAGTATAGTAAATAGGAGAAGGGGGGATTTGCGTTG # Right flank : TTTCTTTGATTCTACAAAAATAATTTTTTATTATAAATGTGTTTATCCATCACTTATTACAAAAGCTTATCTAATATTCATATATTAATTGATTATGCAAATAATCAATAAGCATTTAACTCTATTAAGCCCTACATTCACATTATAATACAAAGCGGTTCTATTTCCATCTGGGCATTCCTAGATAACCAGAAACGTTTTTACACTTTTTTTACCGGCATGTCGATGTTCTTCACATACACATCCTCACGTATGAAAATGACTAAATCAACTATTAATATGTACTACACTTACTGAGTATTTCAACTATTCGTAATCATACGATAGTCATAAAGAAAAGTCTCAACCTGCTTCACGTCAAATCCCAAATTGTCAAAATATTCTGCTCACCGTTCACCAATCCCTCCATCCTTTATATTCCCTTCACCGCAAGTCCTAAATATTCCAACAGAGACTTATTAACAACAAAAGGTATAAAGACTGCAGGCAACAAAAAGGAT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAATAGTAATATAAGATATTTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:86.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [63.3-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 1 42603-43098 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABMHK010000068.1 Eisenbergiella tayi isolate MGYG-HGUT-02330, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ======================================================================================================= ================== 42603 32 100.0 34 ................................ CACCTGCAGGTGCCGCCCTGGACCGGTCTACAAC 42669 32 100.0 33 ................................ TTTAATGATATCTTCTTCAGTCATTGCATAACT 42734 32 96.9 33 ....................T........... TTTCAGGATGTCTGTATCCCTGGCCACCTTAAG 42799 32 100.0 34 ................................ GTGCTTTACCTGTTGTGCATAATCTAAAGCTGCA 42865 32 100.0 35 ................................ TGGCATGTTAAAAACTACGGAAAAGGCAGTTAATT 42932 32 93.8 103 .............T.....T............ ACTGTCACCGCGGGTAATGACCTCTGTATTCGTCCGGTCGAGGCTTACGTAGCCTCGTGGATTGAATTTAACATGGACTTGGGCGGCAATGTAGATTTTCTAG 43067 32 87.5 0 ........TT.A.......T............ | ========== ====== ====== ====== ================================ ======================================================================================================= ================== 7 32 96.9 46 GTCGAAGCCCTTGCGGCTTCGTGGATTGAAAT # Left flank : AATTTCATTTATAAGTAAGACAATGATTTGAAAAAAGAATATTGCGAAAGATTTGAATCAATATGAAATTTTTCTTAGATATAGATACTGCAGGGGATATTATAAAAGTCTTAGTTGAAGTATAAGAAACTATGTACAATTTACGAATTAATGAAGAAAGTTGCTTATCAATTTGAATTTTTTATGCTATACTTTAATTTATAGAAAAGATTGTTATTGTATAAGTATAACAAAATTCAAAGTAATATGTTAATTTGATGTTGGTATAAATAGAGTTTTTAAGGGTTAAGGATACTGATTCAATTGGGAAAAAGGGAGCGATTTATGTTGGTGCGAATAGGAAGCGTACATGAAAGTACCGGGAGATTCGCACCAGAAAAAGAGTTGTTATATTGATGAAGAGATTGAAAATGATTTAAATAAAGATTATATGAGATAGAAAATAAAATAATTATATAAATTAAGTTTGTGTAATGAGATTATTTTTAGGTATATTTGGT # Right flank : TAAGTTCGCCCCTGGAGAAATCCAGGGATTTTTTTGTATAAGCCTGCGGTATTGTGAGGAGAAAAACAAAATTCAAAATATTGTAAAAAAGTCATTGTTTTGTGAAAGAATGCTTATCAAAGGATAATGAGCTATAATTTAAAAGAATATTTTAAGAATGTAAAAGAGTGAAAGTTCAAAATTAACAAAACTATCAGAAAATCAATAATAGAAGAATTATTGATTTTCTGATATATTGAAACAAATGAATGTATTTATATTTGTTTAATGCAGATGAAACAATAAAATATCATAAAAGTAAGCCAACTGAATGATAGAAAGGATTTGAAACACAGGTTAAATATTATGAAATGGGAGATTGTCTGTGTTTTGCCCTTTTTTGTAGTGGTTGAAACATATGCTAATTCGTAATATCAAAAGGACAGAATTAGTAATCAGGCTGCTTACAAGGGACTAAGTGATGGAGATTGTTCGCCCGGATTTAAAACACTCCAGGCCTA # Questionable array : NO Score: 8.01 # Score Detail : 1:0, 2:3, 3:3, 4:0.85, 5:0, 6:0.25, 7:-1.09, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAAGCCCTTGCGGCTTCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGAAGCCCTTGCGGCTTCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.20,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [85.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.68,0.74 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 58599-60342 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABMHK010000071.1 Eisenbergiella tayi isolate MGYG-HGUT-02330, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 58599 32 100.0 34 ................................ AGATCCCGCCTCTAAACGGAGATTCAGCGAATAT 58665 32 100.0 33 ................................ CGTGATGGATAAGGCAAAAGGAAAAATAGCCGG 58730 32 100.0 33 ................................ GCACCTTGTGGACCGGTGGCGCCAGTATCTCCT 58795 32 100.0 33 ................................ TTCTTCGCCGGCCGCAACTCTTCCCTGCAATCC 58860 32 100.0 35 ................................ TTATTAAGCGCGCGGTGATAGTCGCGAACTCTTCC 58927 32 100.0 35 ................................ CTCAATCCGTTCCAATGCTCTTACCAGGGCTATTA 58994 32 100.0 34 ................................ TGCTTGATTCCATCCACAAACCCCTTGCTAGTAT 59060 32 100.0 33 ................................ CTCATACGCATCTGCCTGATTGGTGGCATACAT 59125 31 96.9 34 ................-............... TGGCAAACCATACCTGTTTTTTGCATCCCAACAA 59190 32 100.0 33 ................................ AGATACTCTGACAGCACTGGCATATAAAAACTC 59255 32 100.0 36 ................................ CCTGAATGGATGATTACTGATAAAAGGTAATCCTGC 59323 32 100.0 35 ................................ GCGAAATACTTGGTGAATACTAACCACATCGTAAA 59390 32 100.0 34 ................................ TTTTTAGGCCGGCGTTCCTGCCCCGGCGCCCCAT 59456 32 100.0 33 ................................ CAGATAGACGAAGAAGGGAACCGTACTGAGATT 59521 32 100.0 33 ................................ AAATGCGGATACGACCAAAAGTTTTCAAGAGAT 59586 32 100.0 33 ................................ TGAACAGCCCCATTTATCCCCTCTCCAATAGTT 59651 32 100.0 34 ................................ CAGGCAAATAAGGATCGTGACTTGCTCCTTAAGT 59717 32 100.0 34 ................................ TTTATACGTAACTAAATCTAAATCGTTTTTAATC 59783 32 100.0 33 ................................ CATATTATGGAAGATAGTTTAACAAAGAGATAG 59848 32 100.0 33 ................................ TTAGATGTGGTACATAAGAATTTACGAAATATA 59913 32 96.9 34 ...............A................ ATTAAGAGATTGTGAATAAGGTCAAATACAGCGT 59979 32 100.0 34 ................................ AGTGGCACGACCAGAATTACCGACTCATCAAACT 60045 32 100.0 35 ................................ AGCAGATAGTAATAGATCTCCAATGGATATGGCTA 60112 32 100.0 36 ................................ ATGGCAGTCAGATAGTCAATGTGATGCCTGGCGGAA 60180 32 100.0 34 ................................ CTCCCGGCATAATATATCCTACCCGCCGGCAATT 60246 32 100.0 33 ................................ GGAGAAAATACGACCCGTCCATTGACAGGCATA 60311 32 90.6 0 .......................TTA...... | ========== ====== ====== ====== ================================ ==================================== ================== 27 32 99.4 34 GTCGAAGCCTTTGCGGCTTCGTGGATTGAAAT # Left flank : GATATGATTGATTTTATTTTGCAGAACAGTTATTTTTAATTTATTTATCTATGGTAATTATACACTTGCGTGTATGAAATAGGAAGATAATTCTTGGGAAGAATTGAGGGGAATGAGGGGGAAGGGGGTAACTGGATAGTGTTAAAAATAAAAATTGAAATTTGAGTAATTTACGAAATGGAGAAGAAAGTTTCTTATCATTTTGAAAAATATGTGATATACTTTTATTTATGGTATGAGGCTTTTGGAAGGTAAGTTTTTTGATGATATGAATGGGGGATTTGAGAAAATAGTTGGTCAATGGTGATATTTGATAATTGAGTTATTTGGTGCGAATAGGAAGTGTACATGAAAATCCCGGGAGATTCGCACCTGAAAAATGGTGGATTTAATGGTGAAAAGATTGAAAATGATTAAAATGTAGTTATTGTGAGTGGGGATATTATAATATGTGTATAGATTGTTTTTAAAAATGAGATTGTTTTTTGGATGTTTTTGCT # Right flank : TTAGAATGGGGTAAAGTTCTGGATTATAGGTACCATCTACACCACCTTGCGGGTGGTATGGGTAAAAAATGTCTATATTTAGTATGTAATTTAATTATGATAAGGTGAGGCTATAATTACTTATTGGAGGAATATTATGATAGTAATTGGGTATCTATGCGATTATCCTGAGTATAGAGAAAATGTTTCACGATGGTTATATGATGAGTTTGTTCATAGGGAAGATGATGATTTAAAATATGAAACATTTCATTCAAATTTTTTGAATAATAATAAAACGAAATTACCAATCCGTCTTGTTGCAATTGCGGATGGAAAATGTGTCGGAACGGTTACCATTATTGACAATGATTTCTATGGAAAGAGTTATTCGCCTTGGCTTGGAGGTCTTTATGTTGATATTCCATATAGAAATGAGGGAATCGGGCAGAGAATGATTGATTTTATAAAACAAATTGCGAAAGATTTAGGTTATTATGAGATTTATCTTAATACGGAGA # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAAGCCTTTGCGGCTTCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,10] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGAAGCCTTTGCGGCTTCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.50,-5.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.68,0.74 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 61347-61777 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABMHK010000071.1 Eisenbergiella tayi isolate MGYG-HGUT-02330, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 61347 32 96.9 34 ............A................... CCACCAACTCTGTGCGCTGCTGATAGCGCCGTAT 61413 31 96.9 34 ...-............................ CATTTTGCGGGGGATATCCCGGTACAATTTCAAG 61478 32 100.0 36 ................................ TCTTTTGTCCATCCGTAATAATCCGTTCGGTTCAAC 61546 32 100.0 35 ................................ TCCCTGCATGCAAGCAGCGGAAGTGACGAATGCCG 61613 32 100.0 33 ................................ TCGGAATTATAAAGGAAATTGTTCCTACTGAAG 61678 32 100.0 36 ................................ AAACATGATCAAGGCATCGGGGGCCAGGCGGTCTTT 61746 32 78.1 0 ......T.GG....AA....A.........T. | ========== ====== ====== ====== ================================ ==================================== ================== 7 32 96.0 35 GTCGAAGCCTATGCGGCTTCGTGGATTGAAAT # Left flank : GGGGGATATTATAAGCGGCTTGGCTGGATATATATAGAAACGTGTTTGAATGAAGGAGGTAGGATGTGTGAGATATATAAATATGAGTTATAACTTAGAAGTGATAGCTTTTTAATTACAGGGCGAATTGGGTGATAATAAGTTAATCCTATAAAAACCGAAGAAATGAACTGTGGATAAATTATGGATTAGAGAAGAAAGGTGGTTATCATTTTAAAAAATTTGTGCTATACTCTAATTTATAAAACAGGATTTCGAGTGGTTATGGCTCAGGTATAAAAAATATAAGGTTTTAAATTGATATGATGTTGTTTTGAATAAAGTTATGTTGGTGCGAATAGGAAGTGTACATGAGAATCCCGGGAGATTCGCACCTGAAAAAGAGTTGTATTAATGGTGAAGAGATTAAAAATAAATAGAATAAAGATATTGTAAGGAGAAAAATATAATTAGTATATAATTTATTTTGTATAATGAGGCTTTTTTTCGATATTTTTGCT # Right flank : TAGATTAATATCCATAGAGTTCACATACTGCTCGAAGCCTTTACCGTGTCAAGTATCAAAAAATATTTCCAACATCTACATAAAAATAGTAATTATAAACAAAAAATATATTTCAAGCTACAATTAGCAAGATAAAATAAACAAAAAACATCACACTTTTGGAGAAACATTATGTTCTTAGCTCATATCAGTGAAGATAAGCTTCGTGAACAAAGTATTCTTGAGCATCTGGAGGGGACTGCTGAATTAGCAGGTGAATTTGCCTCTGCATTTGGATCTGAAGCTTGGGGATATGGCTGCGGCATGATGCATGATATCGGCAAATATTCCGATAGTTTTCAGAAGCGTATTCATGGGGGAAAGCTGACGGACCATGCCACTGCAGGTGCCAGGGAATTATATCAAAGACATAATTATGTCTGCGCATATTGTATATCAGGGCATCATACCGGACTTTTAGATGGAGGAAGTGCGGCCGACGTGGGAGGCGAAGCCACATT # Questionable array : NO Score: 9.06 # Score Detail : 1:0, 2:3, 3:3, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAAGCCTATGCGGCTTCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGAAGCCTATGCGGCTTCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.50,-5.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [83.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.68,0.74 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 69613-70964 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABMHK010000071.1 Eisenbergiella tayi isolate MGYG-HGUT-02330, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 69613 32 100.0 34 ................................ TTTTTATTTTAATAGTGTGAAGATAACTGACCCT 69679 32 100.0 35 ................................ GCCAGATTGTCTTTGTGCTGGCTATTGCTATAGTT 69746 32 100.0 33 ................................ AGGCCGGTTCCGATGCGACAGACCTTGCTGACC 69811 32 100.0 33 ................................ CGAAAAGCTTACTGACATCGACAAGAATCTGGA 69876 32 100.0 33 ................................ CCATTGCTTATAGGTCATATCTGCAGGCACTTC 69941 32 100.0 33 ................................ CGTTCCGCCCAGACAAAAATGCTCCATGTTATT 70006 32 100.0 34 ................................ TTCTTTATCCGGTTGTAATCCTCAATATTGACAG 70072 32 100.0 34 ................................ AGCAAGAAATATGCCGTAGAAACTTGATGTATCC 70138 32 100.0 34 ................................ CGAACCGGAACCCCCTTACATAACGCTCCCTCTG 70204 32 100.0 34 ................................ TCCTGCGATGATCACATACTCCCCCTTATCACAT 70270 32 100.0 34 ................................ CTCCCGGCCAACACCCACTGACGGGTCTGCCGGC 70336 32 100.0 33 ................................ CCTCCGTTTCATATTCAATACCGACACTGTCCA 70401 32 100.0 34 ................................ CTGGAAGAACTTTATGCTTAATGAGCATATAGTT 70467 32 100.0 34 ................................ CTGATAATATGAGGGTATATATTTACATCCATTC 70533 32 100.0 34 ................................ TATCAAGCAGGCCGTGGAGTATATGGGGCATGCC 70599 32 100.0 35 ................................ ACCCCGACGGATATGGTGGCCTTGGATTTGATTAA 70666 32 100.0 35 ................................ TCATATCTGGATACACTCTCCAAACAAGAACGCAA 70733 32 100.0 33 ................................ CGATCCACTTCCGCAGGCCGGGAATGGCTCCCA 70798 32 96.9 35 .......T........................ TTTTCCCCTCGGATTTACAATCACCATTGAACCAA 70865 32 100.0 33 ................................ CACAAGAGCAATTGTCTTACTATACTGTTCCCG 70930 31 90.6 0 .............A...........-G..... | TTT,A [70951,70956] ========== ====== ====== ====== ================================ =================================== ================== 21 32 99.4 34 GTCACCACCTTGCGGGTGGTGTGGATTGAAAT # Left flank : ATGAATATCCACCTTTTTTCTGGAAATAGGAGGCTGTCATGCTGGTATTAATTACTTATGATGTGAATACGGAAACTGCCGCGGGTAAGTCCCGGTTAAGAAAAGTTGCAAAGCAATGTGTGAATTATGGAACAAGAGTACAGAATTCTGTATTCGAGTGTGTTCTGGATCCCGGACAGTGTTTAATGCTGAAAGCTGCATTAACGGAATTGATTGATGAAAATGTGGATAGTCTCAGATTTTATTATTTGGGAAATCAGAATAAGGCACGGGTTGAACATGTTGGAGTGAATAAGGGGATTAATGTGGAAGAGCCTCTGATCTTTTAGTGCGAACCTGAAGCGCACATGAAATCCCCGGGGGATTCGCACCGGGATTTTGATGAGATATTGCTTGGGGTTGATCTTTGATGTGGAAGAATGTAAGATGTAAAGTGAATTGGGTGTGGATTGTTGGTGAAGATGAATAGGAATTAAGAGTGGTTTTTGTGCAAAATTGCT # Right flank : TATATTATTGCGATTAGGGTATTTATGTAAATCTCCTAAGTATATTGCCATAACATTTTTTGTAGGCAATACGATGGGGGAATTCATAGAGAAGAGTATGATTTGAGATAGGGAACACGATAAATATATTATGAATACTTAAGCAAATGACGTTACCAGTCTGTCTTGTTTTGTCACGGATAGAAAATATATTAGAAAGATTACCATTATTAATCATAATTTTCATGGATAAGTTATTATGGCAGGATGTAGATATTATAAAAGGTTTTAGGTGGAAGTAGATGGAGATTTACTGAATGAAGGAGGCTTGATATATAAATATGAATTACATTTTGAAGTAATATTTTTAATGATAAAGTAAAATAAATGCTTACGAATAGGATCTCCGTGAATGTATAAATGAACTTTGGGTAATTTGCGGATTAGTGAAGAAAGTTACTTATCATTTTAAATTATTTATGCTATACTTTGATTCATAGAATAAGACTTTACATTACTGT # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACCACCTTGCGGGTGGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCACCACCTTGCGGGTGGTGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.20,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 18-573 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABMHK010000072.1 Eisenbergiella tayi isolate MGYG-HGUT-02330, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 18 32 100.0 34 ................................ TGGACGGCGCAGGCCACGGAATACTACCTGCAGG 84 32 100.0 33 ................................ TCCTCTGCAGGAGCAAGAATATGATGAATTTGC 149 32 100.0 33 ................................ AAAAAGGATAGACACCAACCAGCTCCTGCTTTA 214 32 100.0 33 ................................ ATTGTGGACGGAATGCTATCCTGTAATGCAGTT 279 32 100.0 33 ................................ ACGTAATGTAACCGCATATTTACGGAAAACAAC 344 32 100.0 33 ................................ CTCCTAATTCGTTGCCGCTTCCATGCGGTCTAT 409 32 100.0 35 ................................ CAGGCTCCACCATCAGCTTCGAATATGGCACAGCT 476 32 100.0 34 ................................ TAGTTTTCCGTTGGAACTTATAGGCCTTCTGTGC 542 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ =================================== ================== 9 32 100.0 34 GTCGAAGCCTATACGGCTTCGTGGATTGAAAT # Left flank : TTTTGGATATTTTTGCTG # Right flank : TTGTGCCGCAGACACAGCACCCATCACATTGGCACGTCGAAGTCTATACGGTTCCGCGGGTATTTTACTATGATAGTAATACAGTATCCCTAAGAAGTCGCACCTTGCATTGATGTAAATTGCATATTATTCATAGTTAAAACTTATCCAATAGTAAGCTGTCGTTTTATATATCTAAGAAATAAAAGAATACATCCAATAGACAACACATTTTCGCCCTTATGACATTTGGCAATTATTATTTATAGTAAAATAAAAAACGATTTATAATACATATACATTCTCTTACAAAATGAGGTGAAAAAATGGGAAAGAATGAAGGTTCTTTCTTCCTGAATTACCTGCCAATAAGTATAACTTTGGTATCCCTGGAAAGGGCCGAATTACCTCCTTTTTTGGGTTCTGCCCTTCGCGGTGTGATTGGACAGGCATTATTTCAGGATAAGAATGCCTACAATTATCTATATCACAACGGCAAAATGAGCAGTAATATGCAAGAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAAGCCTATACGGCTTCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: F [matched GTCGAAGCCTATACGGCTTCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.50,-5.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [21.7-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9,0.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 21794-23016 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABMHK010000072.1 Eisenbergiella tayi isolate MGYG-HGUT-02330, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 21794 32 100.0 35 ................................ GCCTGTCCTATATCACCTCCAGCATTGCAATCTGC 21861 32 100.0 33 ................................ TTAAAAACATTAAACAAGATAAGTAGGGGTATA 21926 32 100.0 35 ................................ ACTTTGACGGAGCACGACCAGACAAGCCTTGTGGG 21993 32 96.9 36 .....A.......................... AAAGTATGATAAAGGCCATTGATGATAGTACGGTAT 22061 32 96.9 35 .....A.......................... GTCGATTATAAATAAAACATGCTCCGCATGAAATC 22128 32 96.9 33 .....A.......................... CCTCTGCTACCGGGCATAAAGAAAATGCCGCAA 22193 32 100.0 34 ................................ CTCGGTCACTCTGGCCCATTCGGCAGGAAAGTTT 22259 32 96.9 34 ...................T............ TGCTTGGGGACACATTGCCAGCGGCGGCCTTAAT 22325 32 96.9 34 .......T........................ CAACTGGATGCCATGGATGTGGATGAAACGAATT 22391 32 96.9 34 ...........T.................... TTATCTATATCTTCCTGATCTAAAAACTCTTGAT 22457 32 96.9 36 ...........T.................... GTGCACATCCCAGTGATCATTACGTGATGCATGAGT 22525 32 96.9 33 ...........T.................... TGTAGCAAGTATGGAAGAACGATACATAGAAGG 22590 32 93.8 36 ..A........T.................... AGCCCAAGGCTGATGACAATAGCCCGGTTCATACGC 22658 32 100.0 33 ................................ GATCAACCCTGCTTTAATGAGCTCGTCTCTCGC 22723 32 78.1 34 .....A.TC..T.C..TT.............. TATCATACATATGTATTAAATGTTCAAAATCAAG 22789 32 78.1 33 .....A..C..T.CG..T........A..... ATATTGCATATTCTGGATATGGACATTTCGAAA 22854 32 87.5 34 .....A..C..T.C.................. AATGATACTTACAAAACAATCCAGATTACGCGTA 22920 32 100.0 33 ................................ GACTTCCAGCAGTAGAACGCTACCGCAATGACG 22985 32 93.8 0 ............A...............G... | ========== ====== ====== ====== ================================ ==================================== ================== 19 32 95.1 34 GTCGAGGCTTACGTAGCCTCGTGGATTGAAAT # Left flank : ATCATGCGGATTTATGATATTATGAATGAAGTGATGAAGAGTTCCTTTGAAAAAGTGGTACAGGCGAGAGGAAACCGGGCCGGTTTGTATTATCATGGACAGATTGTGGACGCTTTTGAGAGGAAGGATGATGAAGCGGCTGAAAAAATAATGGATGAGCATATGAAAGAGTTGTATGAGAGCTTTTTTAATGATTTTAGGGATTAAAAATGCTGTATGGACTTATTTTATTAAATAAACGTTATATTGAGTAAAAAAGAATTAGTGATATTTGTTTTTAGATGATAAAATAAGAGTGGAGTTTATAATTTTAAGAGGGTCATAAGTAAGGTGCGAATGTATAGTGCACATGAAAATACCGGGGGATTCGCACCAAAAAAGTGCTTAAATATTATGGACATAAATGTTTTGAAGGCTTATTATATAAATGTGTAAAGATATATTTGTGTAAGAGTTATATTTCGGGGTTAAATGGTTATGTTATTTTGAATGTTTTTGCT # Right flank : TATGGATATCAAATGATATATCGAACTTATATACAATATAATATTAGATGGAAAGACAGATGAAAATATGGATTGAAATATAGAATATATGTTGAGAAAAGAAATGGCCATAGCCAAATATATAAGAAGTATATTTCACAATCTGTAGGAAAGAGTACATCAAAAGGCCATGTTGAGCCAGTTCATAAAGCTCTTGCTAAGCGCAGAAGAAGATGTACTATTCCATATAAAGATGAAAGAGGTTGGAATTTTGGGAGGAAAAGAAGCATCAAGAGGTTTTTTATATCAGGCATTTGCTTCCGTTCTTGAAGCGTTGTGTCAGAAAAATTGGGATAAAATTTATATAGAATTAAAGTCGAATGATGATAAAGTTGATATTGCATTAGAAGAAAATGGCAGAATTATTAAAAGTATTCAGGTGAAATCAACAATTAATACTTTTAGCAAAAGTTCAATACAAACATGGCTAAGAGATCTTATTCGTGACGATGTAGCTCGGC # Questionable array : NO Score: 8.47 # Score Detail : 1:0, 2:3, 3:3, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.46, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAGGCTTACGTAGCCTCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGAGGCTTACGTAGCCTCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.00,-4.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-22] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //