Array 1 15846-16083 **** Predicted by CRISPRDetect 2.4 *** >NZ_WKYU01000001.1 Lactonifactor sp. BIOML-A6 scaffold1_size317426, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ================================== ================== 15846 33 100.0 33 ................................. ATTTTGGGCTTGCCGTTGCTATCAAGCATTACT 15912 33 100.0 34 ................................. TCGTTTCTTTACGAAACAGAAATAATCTGATATA 15979 33 100.0 34 ................................. AGTTTTGAGGAGTAGCTGACATCTCCACAATATG 16046 33 87.9 0 ................AA..G.......A.... | GG,C,A,A [16060,16068,16072,16074] ========== ====== ====== ====== ================================= ================================== ================== 4 33 97.0 34 GTCGAGGCTCGCGAGAGCCTTGTGGATTGAAAT # Left flank : GTGATAAGGTGCTGGTACTGATTACATATGACGTGAATACAGAGGATGCAGGCGGAAAAGCCAGGCTCCGCAAGGTGGCAAAGCAGTGCACAAATTATGGTCAGCGGGTTCAGAACTCGGTGTTTGAATGTGTGATGGACTACGGAAAATGCAGAGAGGTGAAGCATATTCTGGAGGAGATTATTGATAAGGATAAGGACAGCCTGCGCTTTTATTATCTGGGAAATAATTACCAGGGAAAGATAGAACATATTGGCGCAAAGGAAACGTTTTCCGTAGAGGCCCCGCTGATTATCTGATGAGTGCTTGTTGGTTGTCCGATCGTAGTGGGATTCACGAAGTGCGAATGTGAGTTGCACATGATTTCTTTGGGGGATTCGCACTGGGTTTTGGGGTGTTTTGGGGGTTGAAAAAGGGTGATTTTGAAGTTTTAAAATCGTTTTTTGTAAAAATATATAATTAGAAGAAGGATATTGCTTTGGAAATTGTGCATTTTTGCT # Right flank : TCAGATTCGTTTTTAATTAATAGAGATTTAGTGCGAATGTCAAGTGCACAGAAATTTGCAGGGGGATTCGCACTAGAAAGTATGCTATATTGAATAGGCTATGAGGTATGGAGGAAGGATATACTTGCCATGGTTCGGTGAAATGTGTACAATGTGACTATATATATTGCAATTTTCAATGAGATAATTATGCATAATTGCAGTCGTTCCCTTCGCTGGGAACGTGGATTGAAATTATTTTTAGCGGTACAACCTGATAGTAAAACTTAGGTCGTTCCCTTCGCTGGGAACGTGGATTGAATTAGTAATAAATTTCCTGCTTATCTGCCGTAAAATAGAATTCTAAGGAGATAGTAAACATGATATTCGACTTTTACCCATGGAAAATGGATATTGATATTAAAGCTACGAAACAACTTTATGAGAGAAAAGACTACGCCAAAGATAGGAATGCCAATAAAACTATGTTTCAGGAGATGTCCGAAAAACAGAGAAATTTT # Questionable array : NO Score: 8.71 # Score Detail : 1:0, 2:3, 3:3, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAGGCTCGCGAGAGCCTTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGAGGCTCGCGAGAGCCTTGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.90,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 6499-6668 **** Predicted by CRISPRDetect 2.4 *** >NZ_WKYU01000021.1 Lactonifactor sp. BIOML-A6 scaffold21_size73941, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 6499 33 100.0 36 ................................. TGGGAATTGGATAGAGGAGGATTCCAATGGAGAAAC 6568 33 100.0 35 ................................. TATCACTACTCAGCCCTATACGTTTATCGACTTAC 6636 33 72.7 0 ................A.....C.TTG.TTTT. | ========== ====== ====== ====== ================================= ==================================== ================== 3 33 90.9 36 GTCACTGTCTGCGAGGGCAGTGTGGATTGAAAT # Left flank : CCATTATATGTTTGGTATAAAATGTGATTTCAGCAGTGAGAGCGAAGCAAAGGATTTCTATATCAGAAAGATAGCTGCACCAGTATATCGGAAAATTTGATATTTAAATTTAGCATGTATAAATGGGCATTTTTGTTCGGCGAAAAGTCTGCCTGGGGTATTCCCTCATTCTCCCACGTTTTACCGAATTTAGTAGAGGCTGCTCCATTCCTCGGCAGCAAGGAAACCATTCTCATTGCCCCTATAACAATGTCCCCCATTGTAATTTTTATGTACTTGCTATTGCACTTTGGGCAGTGGTTTAGAGACTGAGATGGGGACTTGTCAAAGTGTTTTAGGTGCGAACCCCCAGTAAACATAGAAGTACTGGGGGATTCGCACCTAAAACAGGAGTACAACTGGTCGCGTAAAGGGGCAAAGGAGAACATGAGAAATTGTATATTTGTGTGGTATTAACAGATTTAAAGTGATAAAATGAAATAAAATTATATATATTTGCT # Right flank : TGTTATGTTACTAAATCAAATTGAGTTAACATAATCGGGAGGGCATTTGCGCTCCCGAAAGTAACTACAGCAAGTGCAAATAGTCTGTCCACGACAAAGCACAATGTAGTAAAAAATTCTATTTGTATAAACTTTTCCACTTATCAGGTGAAAGTAGAAAGTATTATAAAATGCGGCAATTTTTGGGCATATGGAGCAGTAGCATGAAATATTATGAATAATGCTGGTGAAGAAAAGATAATAAGCCTCTTAATATGTTATAATGGCATAACACACTGCCGCATGAAATATTATGAATAATGTAGGTTTAGAATAGATAATACAAACATTATGTGTTATAATATGTGTTAATTACGGACATAAATTATCTGCCTGTTGTTATTCTTTCATTAAAGTACAGAGAATGGAAAAATAACATAATCAGATAAGCATTAGGTCTGTAAATTAATATCATTAAGGAAGGTGAGCAATTGGAAAACTATACCAAGTATAAGCTAAAG # Questionable array : NO Score: 7.91 # Score Detail : 1:0, 2:3, 3:3, 4:0.55, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTGTCTGCGAGGGCAGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,10] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCACAGTCTGCGAGGACTGTGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.10,-4.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //