Array 1 46020-44464 **** Predicted by CRISPRDetect 2.4 *** >NZ_RHOR01000015.1 Companilactobacillus kedongensis strain 116-2 contig15, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 46019 36 100.0 30 .................................... CTATGACGAACCATCATTTGTGGTCATTGC 45953 36 100.0 30 .................................... TTCTTTAAAGAATATGGAGCAGCAACAAGT 45887 36 100.0 30 .................................... CAACTAAGATAGTTATTGGCCTGAGTCATC 45821 36 100.0 30 .................................... CAGATACACCGAAAATTAAAACGGATAAGT 45755 36 100.0 30 .................................... ACGAAGCCCGGTAAGTTAAAGGCACCGTAC 45689 36 100.0 30 .................................... GTTTCTACACTTGATTTCGTCATATTCTGG 45623 36 100.0 30 .................................... AGTCACTGATGATACGGGCGTTAAGGCTAT 45557 36 100.0 30 .................................... TACCGTGTCTTAGGAGAAAACAAGCTTGAT 45491 36 100.0 30 .................................... GATCATTGGCTCAGCTTTACCAGTTACCTC 45425 36 100.0 30 .................................... GGTTCGCCGGTTTTCTCGTTCCAAACGTAT 45359 36 100.0 31 .................................... TTACGTCAAGCTCCATTACAACAAAGGCCAT 45292 36 100.0 30 .................................... CCGTCAAATGAAGCTAATGCTTGCACTTAT 45226 36 100.0 30 .................................... ATTCCAGCGGATTAAGGAGAACTCCTTAAT 45160 36 100.0 30 .................................... ACCCTTTTCAAAATCGTATCTATCACAGCT 45094 36 100.0 30 .................................... CAACCAAGTAAATACTGCCACAAGAGCCTT 45028 36 100.0 30 .................................... TACAATCAAATGTATTTATGTGAATCGGTT 44962 36 100.0 30 .................................... GCGAATGTACCACATCAATTACATGTCCCA 44896 36 100.0 30 .................................... AGTGATCAGGATTAATTGAATTAACGTAAT 44830 36 100.0 31 .................................... TAGCTTCTGTATCCAATCATCCATCGCTTTC 44763 36 100.0 30 .................................... GAAAAAACAGCAAATATGTAGCCCCCACAG 44697 36 100.0 30 .................................... AATCGATTGTAAATATTGGTTAGATGGTAC 44631 36 100.0 30 .................................... TACTCTATGGAATAAAATAATGCAACTACT 44565 36 100.0 30 .................................... ATCTTTTGTCTTTTCCATTTGTATCTCCCT 44499 36 97.2 0 ...................................A | ========== ====== ====== ====== ==================================== =============================== ================== 24 36 99.9 30 GTTTTTGTACTCTTAAGGATTTAGTAATAGTAAAAC # Left flank : AGATTTAAATTGAGCAAGAATAGTCACCCAACGTGGCTTGTTTTGTACAATGTTGACAGCTTTATTTCTCAGTACGAAAAAAATAACTTCTTTATCGAGGTAAAAGAGTTATTGGGCGAATATGATTTGCGAGTAGTTTATATCGGTAATAATCTTGATAATTTACCAATAGACGCAACGGATTTAGAAAAAATTGTCGTGGCTGCTGATGAATTTGATCAGTTGTTGCCAACTGACGAACTATTACGCTCGGTAAAGAATAATTATCCTAATGAATTTAATAGTAGTGAAGAGAAATTTGTTGAATCAATGCAACGGATTATTCCATATATTGGAATTAAAGAAAAATTGTTTCTTAATAGCAAAGATTTGGTATTATTGAAGGTAGTAAGTGAGATTCTCAACTACGAGACGTCATTTAGTTTTGAAGATCAGTTACTGACAGATGCAGAAGCCAAATTTTTGGAAGGTTGATAACGTGTTAATTTTTTTTATTTGAG # Right flank : TGAGCCGGCAGAATCGTCATATATGTTGAGATACTGGCCCATTTGCTAAGTGCACAATCCTATTTTTCTATCTTTTTAAACATTATTTCTTAATCCAAATTTGATAACTTCAATTATTATCTTTTCATCCATTTTTCTTGAGCCGTTTACAAACAAACCCCTATAAATCAATACCTAATTTTTTAACCACTTCATCCACAGTAAACCTGGAACCGTCATCATTTATTTTGACATTTGAATAATCTTTCATATCTAGCAGATCCTCTAATTTGTCGGCCATCGCTGTTTCAGCAAAACTATTGAAACTTTGTCCTGTAACTTTTAAGTAATCGTTAATTGCTTTATCCAAGTTTGAGTCGATACGTATTGATCTTGCTTGAGTTGTCATTTTTATTCCTCTCTTTCAATAATTGCATTTTATCATGGTAGTATTATTGAAACTATGGTTATTGCAGATATTAAAATTATTTCAATACAATCAATCGATTAAGCACACCCAA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTTAAGGATTTAGTAATAGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA //