Array 1 10164-7554 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGGMU010000006.1 Methanococcus voltae strain A2 Ga0416753_06, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ================================================================================================================================ ================== 10163 31 100.0 35 ............................... ATTTTTTGGGAAAATGAAAAGAACGGAGCAAGCTT 10097 31 100.0 35 ............................... ACAACATAGCTATTTTAAGAGTAATAAATATAAGT 10031 31 100.0 37 ............................... CATATAAGCAAGGTACATTATACTTACTATATTCCTT 9963 31 100.0 36 ............................... TCTAATAGATGGCTCTACTATTAACTTTTGTTTAGG 9896 31 100.0 36 ............................... TTAATTATTATTATTCTTATTATTACCCTTGCTTTT 9829 31 100.0 36 ............................... AACAATCCTCAGTGAAGTAGCTACATCCCCCTTGTA 9762 31 100.0 41 ............................... TCTTATAGATGGTTCTACGATAAATTTTTGTTCAGGGCAAA 9690 31 100.0 35 ............................... TACATAGACCGTATATAATCGTTTAAATATTTTTC 9624 31 100.0 35 ............................... TTGTTATTAGGGACATTAAAACTAACAGAAACAGC 9558 31 100.0 35 ............................... GTTCAACTAACTATTAACACAGATGCAGGTGTTTC 9492 31 100.0 36 ............................... TCATCTTGGGGTCAAAGAACTTTTACCGCTCAAATC 9425 31 100.0 36 ............................... TATTTAGCGTGTTTAAGGATAGTATCCTTAATTTGT 9358 31 100.0 38 ............................... TCCTCTTCTTCTTTACCCCATACGACGTCTTTCATACG 9289 31 100.0 39 ............................... ATACTTGCAGATAGGGAAATATCTTATGATAAATCAAAA 9219 31 100.0 34 ............................... TATTATCATATAATAAATTATCTCATATTTTGGG 9154 31 100.0 35 ............................... CAAATCATCTTTTTCAATATATAGGGTATTACCAA 9088 31 100.0 35 ............................... TAAGTGTACATACCTTAGAGGTGCAGACCTTAGGA 9022 31 100.0 36 ............................... AAATCTAAAATAAATTTGGAAAAAGAACTTACTAAA 8955 31 100.0 36 ............................... ATGAAGTGATAGGTGTTTTTAATAAGGGTTCAATTC 8888 31 100.0 36 ............................... AAGCAATTACAAGAAGAAACTCAAACATACACTATA 8821 31 100.0 36 ............................... TTTGGAGCTATACTTGTCTCATATTTTTTATTAACC 8754 31 100.0 36 ............................... CGTTTGGTCAACATTTTTTACATCCTGTTGCACCGA 8687 31 100.0 36 ............................... AAAGTAACAGCAGTAGAAAGCGTTTTAAATGCTAAT 8620 31 100.0 36 ............................... TCTTAAGGAAGTATCGGAAGTGTAAGGTATAGTAAC 8553 31 100.0 35 ............................... AATTATGAATCACTACATGAACAGAGGTAAAACTT 8487 31 100.0 33 ............................... TTGGTGCGGGAGTCTTAGAGCTAAATTCGACGA 8423 31 100.0 36 ............................... GTAATACTATGTTGCATTATATACCAAAATAATGCA 8356 31 100.0 37 ............................... TTTGGAGTTATATAGATATCAAATATACGTCCGTCTT 8288 31 100.0 35 ............................... AAGTTCAAACTATTAACATAGTTTGATATATCCTT 8222 31 100.0 35 ............................... ACACATATTCAAGAAGCTATAGATATAGATGACGC 8156 31 100.0 41 ............................... TTCATAATATAGTACGATAGTTAGAATATGAAATATATGTA 8084 31 100.0 41 ............................... TCTTTCGTATTTACTACCCTTTTTATAAGGGTTAATTCTTC 8012 31 100.0 36 ............................... ATACTGAAGATAATACTACAAATAATACTGAAGAAA 7945 31 100.0 37 ............................... AAAGCAAGCGGGGGAACAGCTTGTATTGATGAGTTAG 7877 31 100.0 36 ............................... ACCTAATATTTTATACATTGAAGAGTCAACAAAATA 7810 31 96.8 128 ..............................G CCCAACTGCCTTTAAATAAATCTTTCAGATTTATAGCTCGACAACTTATATTGTCGATGGGCGGATGGCTTTATGTCAAATCGGAGATTAGGTATTAAATATTTTGATGAAACTTTTTTTAAAAGTTT 7651 31 93.5 36 C....G......................... ACTATTGACGCTAACTTATTTACTCTCGCATATTAC 7584 31 93.5 0 ............................T.T | ========== ====== ====== ====== =============================== ================================================================================================================================ ================== 38 31 99.6 39 GTTAGAAATAAGACTATAGTAGATTTGAAAC # Left flank : GGGTTAAAAAATTTAATGGATGAAGATTACGATAGTGTTATAATTTTTAAGAATAATCATTTGAAGTATATCGATAGACAAATATTAGGTGTCGATAAAAATGAATTATCTGACATATTGTGATATATTATCTAATAAACCTAATATTTTTTTATAAATTAAGTTTTTAAAGTAATGACTTGTACCATAGTACCCATACTTAACCATACGTTTGTCGCATATATGGGATATATTATAAATTATTTAAATATTTAGATTTAATAATTTAAAGATTTTATGGTTTTTTAACATATTATATATCTCATTATTTAAATTAACTTGTTATTTAACAATTATTTTGTATAATTTGGTAAATTATATAGTATTTAGGGAATATATCAATTAATAGCACATCTCGAATCGTATATAAAAGAAAGGTAAATGGGCATTTTCGAGATTTAAATCTTTCAAAGAAACGTTTTAATAAGTTATTTATAATAAAAGAAGGAAATATATGACGT # Right flank : TTTATATCTTATTAAGTTCCCATCAAAGGATTTTATGAACGAAGTGAATAAAAGGGTTTGGTTGAAAGCCCAACTGCCTTTGAATAAATCTTTCAGATATATAACTCGCCGATTCACGTTTTCTATGGACGATGGCATAACTTCATAGATTAGATAATAGGGCATTTTGATGAAACTTTTTTTAAAAGTTTCTTAGAAATAAGACAATTCTGAAGATTCAAGGATTGAAAATTTAAGTGAATTTTTGCAAATTAAATATTTTTTTAGTGAGTAACTCATTAATTTTTTAAAAATAATTTTTATAATATATACTAAATTCATATTTCAAGCGATTTATTAAATTATATCAAAAACTAAATAAACAAAAAGTTACTATATTTTACTAATTTTATTGATAATTAAATTATTTATGAATTATTGAGGGATTGGTTTATATAGGTAAAAAAATTCCGAGGAAGAATGTATTAGTTGGGCAAAGCGTGATTTAAAATATAAACGGT # Questionable array : NO Score: 6.02 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:-0.21, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAGAAATAAGACTATAGTAGATTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:74.19%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 1 22901-23460 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGGMU010000008.1 Methanococcus voltae strain A2 Ga0416753_08, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ====================================== ========================================== ================== 22901 38 100.0 35 ...................................... CCCGCGGAGGAGTTAGATTCCTCTTTGGATAGTTC 22974 38 100.0 42 ...................................... TTTTCATAGCTTGCACTTTTTCTTCTATCATACCATGTCCAC 23054 38 97.4 36 C..................................... AAAAAATATATCTAGTCATGAGGTATTTTTGGATAT 23128 38 97.4 37 G..................................... TATATTGCATATGTTTTCATAATACACACCTTCAAAT 23203 38 100.0 35 ...................................... CTCCTCTTGGACTTCCACATGCTTTTGGATGTCCT 23276 38 100.0 35 ...................................... ACGTACATTAGAGTATATAAAAATTTAAATAATTG 23349 38 100.0 36 ...................................... TAGAAGTAAGAATTCATGAAAATATACGAACATTGT 23423 38 100.0 0 ...................................... | ========== ====== ====== ====== ====================================== ========================================== ================== 8 38 99.3 37 TGTCACAGTGCATAATCCATTAAAACAAGGATTGAAAC # Left flank : TTAATTCGTATATAGAAGTTTTAAAAGGCAAATATCCTGAAGCTACTAAATACGAGCGTAGATGTTTGGATTGTTGTTATAAAAACATTTGTCCAAGGTAATAATGGTAATACTTAGTATGATTTTTACGTGACCTTTGTAATAACGCATTTCAAAATCCAAAATTATTAAGCCCATTTTGAGCTCCTTTTTTTAAGGTTAAAAAATTTGGAGTTCTTTATGAGCTTTATTTAATTCATGTTCTTTATAAAATAGTTGGTTCATTTTGTATAGCTTGTTTATTAGTTATTAAGTACCTTGTAGTTATTAAAAGAGTTACTTTTTACTTATTTAACTAACCCCGAATTAGATTTTTAAAATACAAATGATAACTTTTATATACTGCCAAAAACAAACCATATATTGTTGAATTACATTATTTTTGCGATACGGTTAAATAGAGCTTTGTTTTATCCATAAGTCTTAATTTGTACTTATTGATGAGTAATAATTTAACTACG # Right flank : TACATTTTCATAGTTTATCACCTTGTTTTTATTTTATTTGTCACAGTGCATAATCC # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TGTCACAGTGCATAATCCATTAAAACAAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.79%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.70,-3.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.78 Confidence: HIGH] # Array family : NA // Array 1 16320-19383 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGGMU010000009.1 Methanococcus voltae strain A2 Ga0416753_09, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 16320 37 100.0 36 ..................................... TATTTGATAGTCTAACCAATGATGAAAATGGTTCAC 16393 37 100.0 37 ..................................... CCTGTCTTCTTTGTTGAATATGACGAAGCCGGAAACG 16467 37 100.0 37 ..................................... AATCTTCTAATGATTGTATTTTTAAAATTAAAATATT 16541 37 100.0 36 ..................................... CCCATTTTAGATTTTATGAAGTAAACGATTGCAAGA 16614 37 100.0 35 ..................................... CAACTTCAACTTACAACTTCAACTTCAACAATGCC 16686 37 100.0 35 ..................................... CTATACTATATAAATATATCGGATTAATAATCGTA 16758 37 100.0 36 ..................................... CTAATCGCTCAGTACTTAGCTGTGTGCTGTGTATCT 16831 37 100.0 39 ..................................... AATTAGACGGCGTATTCCGTGGAGAAACATATGCACAGG 16907 37 100.0 35 ..................................... TTCTTACATGTTGGGACTTGATTGTCCGGAATGTA 16979 37 100.0 41 ..................................... ATCCTGACCCCCACTTCTCCGCTGTGTTCTGTTTCTTGTCT 17057 37 100.0 42 ..................................... GAAGGAGATGGCTTTGTGTTGTTTTTTGCCATTCACATCACC 17136 37 97.3 36 ..........A.......................... AAGGTTTAGCGACAGCTAACCCCTTATTGAGTTAAG 17209 37 100.0 37 ..................................... GAACCACTTGGGAACGGTTAAAAGAAGACTTTATTAA 17283 37 100.0 37 ..................................... TTTTCAATAGGTATATTAGTATTATTAATTGTATCTT 17357 37 100.0 37 ..................................... ATGGATTAAATGAAATAATAAATATAACTAATAAAGA 17431 37 100.0 36 ..................................... GTGGAAGCTCTCCTATCAGATGCATCCATCTTTTTA 17504 37 100.0 36 ..................................... TCAAGTAAAAGGGAGTGACCTGCTTCTGTAGTGAGG 17577 37 100.0 37 ..................................... TCTTCAGACATTTCTACAACTATTATTTTTTCAGATT 17651 37 100.0 39 ..................................... CTGTAAGGGATAAAAGTGGTACTTTTTCAACAAATAACT 17727 37 100.0 35 ..................................... AGGTATGCACCTTCAAGGTCTGCATTCCTAAGGTC 17799 37 100.0 34 ..................................... AAACCTCTTTTTATTGTTGTTTGATGGGTTCGGA 17870 37 100.0 37 ..................................... AACATACTTTGTACATCCCGTATGTTCTCATTGATGT 17944 37 100.0 40 ..................................... TTCGACATGTTATCACAACCTCTTTTTACCATTATATCGC 18021 37 100.0 34 ..................................... GGCTAATACAATACATTCTCGTTCAGAACATTAC 18092 37 100.0 34 ..................................... CTTATAAGCGAAGCTCTTTGACCTGCTACAACAA 18163 37 100.0 36 ..................................... TCTAGTCTAAATCCTACAAGTTCAAGCTTTAGTATG 18236 37 100.0 37 ..................................... AACATAATTAGAAATTCTATCTGAATCTTTTGATTTC 18310 37 100.0 35 ..................................... CCACATATGGGGCATAATTGTGATAAAGATTTACA 18382 37 100.0 36 ..................................... AAACAGCTAATAATACAGAGGAGAAGCCAAAAATAG 18455 37 100.0 35 ..................................... AAATGTTAATTAAGTTACCCTAATATATTATAATA 18527 37 100.0 38 ..................................... TTTTATTGTTGCTCTTCTTGTTGTTCTTTCTTAAGAAT 18602 37 100.0 36 ..................................... TACTGTACAAAGTCCCCGTCCCGACGATAGATATTA 18675 37 100.0 39 ..................................... TCCAATAGTCCACTAATTGGGCTATTGCTCGTTGAACGT 18751 37 100.0 36 ..................................... ATACAGATTCGCAAGCTATTTTCATAGCCTGCACTT 18824 37 100.0 37 ..................................... ACTTATTATCTACAGGTTTATGTTTAATACGGACGTC 18898 37 100.0 37 ..................................... TTTTTAAAATAAAATTCTATGAATTTATGATTATCGA 18972 37 100.0 35 ..................................... TTAAGATTGTACATATTCCCACCGTGTTTTATTTG 19044 37 100.0 37 ..................................... CGACTTTTTTTCATAATTTAATCACAAAAATAGCTTA 19118 37 100.0 41 ..................................... TCTAAAGCGGTATTCCAAGCTGTTTCAAACTTGCTAATATT 19196 37 100.0 41 ..................................... TATTTATACGGCATTACATCAGTTTTAGAACGCATTATCAC 19274 37 100.0 36 ..................................... GTTATCAATGTGTATTCATCTTCTGTTTCAGAATTC 19347 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================== ================== 42 37 99.9 37 GTCACAGTGCTTAATCCATTAAAACAAGGATTGAAAC # Left flank : GACAAAACATTTATTTTGTCCTTTTTATATATTTTAACGATATTTTAAGGGATTTTATTAAATTATTTATCAATTTTTTAAAAATAATAGTTGAAATTATGTATAGTAATACTTAGTATGATTTTTACGTGACCTTTGTAATAACGCATTTCAAAATCCAAAATTATTAAGGTCATTCTGAGCTTCTTTTTTTAGGGTTAAAAAATTTAGTAGATACTATGAGATTTGTTTAATCTATGCTATTATTTATATGTTCAATTCATTCTTTATTGTTTGATTATTGGTTATTAGTTACTTTCTATTTATTAAAAGAGTTACTTTTTACTTATTCACCTAACCCCGAATTATAATTTTAAAATACAAATGGTAACTTTTATATAGAGTCCAAAACAAACTATATATTGCTGAATTACATTATTTTTGTGATACGGTTAAATAGAGCTTTGTTTTATCTATAAGTCTTATTTTGTACTTATTGGTGAGTAATAATTTAACTACGT # Right flank : CGACTTTTTTTCATAATTTAATCACAAAAATAGCTTAGTCACAGTGCTTAATCCATTA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACAGTGCTTAATCCATTAAAACAAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.70,-3.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.78 Confidence: HIGH] # Array family : NA //