Array 1 36248-37602 **** Predicted by CRISPRDetect 2.4 *** >NZ_SQMF01000125.1 Escherichia coli strain EETUKB189 NODE_1184_length_161125_cov_53.565430, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ========================================== ================== 36248 29 100.0 32 ............................. GGAAGAAGCGGTAAAGCGGGTTCCAGTTCAGC 36309 29 100.0 32 ............................. AAATTAATTTCGAAACGGGCGTTGATGGTGAA 36370 29 100.0 32 ............................. GTGACCATAAGGGCATTTCATACTGCCTTGCT 36431 29 89.7 35 ..........................NNN NNNNNNNACGTGACAACGCCCGCGACAGAAACGTC 36495 29 100.0 38 ............................. NNNNNNNNNNCCGCGCTTTCGGTGTGGGAGCAGTATGA 36562 29 100.0 32 ............................. GTCAACGCTGGTCAGGCGTGGTACTTCCTCCG 36623 29 100.0 32 ............................. TCGTTGATGGTGTGATGAGTGTACAAAAAAAA 36684 29 100.0 32 ............................. AAACTCCGTGGTGTAGTGCGTTTGTTGGTGCG 36745 29 96.6 39 ............................N NNNNNNNNNGTTCTATTTCCTCGGGATTTGCCGACACGC 36813 29 100.0 32 ............................. CAGTAAACGTTCGCGCGTTCTCGCGCTCACGA 36874 29 96.6 32 ............................C TCTGTGTATTCGCTACCAGCCAGCACCGGTAC 36935 29 100.0 32 ............................. CCAGGGAGCGAAGCTGTGGCCATGCTGAAAGG 36996 29 100.0 32 ............................. GCGATCGTATTTTCCGCTACGTCGCTCAAATG 37057 29 100.0 32 ............................. GCTGGCGCACCTTACGCAAAAATAGACGTAAA 37118 29 93.1 39 ...........................NN NNNNNNNNTGGTATTAACGGGAATGTAGTCACTCCAGGA 37186 29 96.6 39 ............................N NNNNNNNNNGCACACGTCGAGCTGGTGGGGATTAATGCT 37254 29 89.7 37 ..........................NNN NNNNNNNAGTGATGAATTGGAAGTAACGGATAACCGC 37320 29 100.0 32 ............................. CAGGGTAACTGGCTGCTCCTCAACCATTCCGC 37381 29 96.6 32 ........C.................... GGGTTTTAGCGACCGGACCAGAGTACGCAACA 37442 29 96.6 32 ........C.................... TTGCGCCTTAAGTTCCTTAACTTCCTCTGTAT 37503 29 96.6 42 ........C.................... GNNNNNNNNNNCGACTGAATCCGGCGAGGCTATCAACTGGCC 37574 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ========================================== ================== 22 29 97.8 34 GTGTTCCCTGCGCCAGCGGGGATAAACCG # Left flank : GTCCTTGCCGCCGGTGAAATTGAACCACCACAACCTGCGCCGGATATGTTACCACCAGCTATCCCGGAACCTGAATTGCTAGGTGATAGTGGTCACCGGGGGCGCAGCGGATGAGCATGGTCGTGGTTGTTACAGAAAATGTCCCTCCGCGCTTACGTGGACGGCTTGCAATCTGGCTCCTGGAAGTACGTGCCGGTGTTTATGTTGGTGATACATCAAAACGTATTCGGGAGATGATCTGGCAGCAAATCTCCCAACTGGCAGGTTGCGGAAATGTGGTCATGGCCTGGGCGACCAATACCGAGTCGGGTTTTGAATTTCAGACCTGGGGTGAAAACAGACGTATTCCGGTGGATTTGGATGGGTTACGGTTGGTTTCGTTTCTTCCTGTTGAGAATCAATAAGTTACCCGTTCTTTAAAAATAAGGAAAAGTTTGAATTTAGTTGGTAGATTGTTGTTGTGGAATAAAATTGTTTAAAAACAGATACGTATGCTTAGT # Right flank : GGACGCACTGGATGCGATGATGGATATCACTTAGAGTTCCCCCCGCCCCTGCGGTAGAACTCCCAGCTCCCATTTTCAAACCCATCAAGACGCCTTCGCCAGCTCTTTCACCAGAGGTAGCATTATCCGCATAACGTCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGTTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCAGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTTCCAAGATTCCAGTTGGTCGCCTCCACCGAAAGTACCGCAATACCGGCTTTGTCGAAAACTTCGGCGTCATTACAACAGCCAGTACCCTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCAATTCCATGACTACGCGCAATTGCCAGCGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCGCTGTTGAAATACAATTTATCGCCAA # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCTGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCTGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.30,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //