Array 1 9853-5791 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJCF01000023.1 Dolichospermum planctonicum strain NIES-80 sequence023, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================================================================ ================== 9852 37 100.0 35 ..................................... AGTTCTAGAAGCAAAGTATCTTTTGAAAATTTCGC 9780 37 100.0 36 ..................................... TTCGACAAGAAACAAAAAGCTATCATATCGCAAATT 9707 37 100.0 34 ..................................... TTTTATATTTGATTTTTCCGGGCAACAAATAAAG 9636 37 100.0 39 ..................................... ATCATTGTGACCCATTATCGACGCAATCACTTGATTCAA 9560 37 100.0 40 ..................................... TTCTACTCGATTTAATCAATGAGCATGAATCAAAAAGAAG 9483 37 100.0 40 ..................................... GTGACATACTCATGAGAGCATATTGATTCTTAATCTTCTC 9406 37 100.0 38 ..................................... TACTTAAGCGATTATGAAGCCGGTGATCAAAGACGCGA 9331 37 100.0 33 ..................................... ACTTTGATTCAGCTTTAATCTTCTAAAAATTAT 9261 37 100.0 33 ..................................... AATCTTATTGATAAATCAATAAATTCACATAAT 9191 37 100.0 36 ..................................... ATCGAGAATTTGATAGCAATCGGTCAAACTACCACG 9118 37 100.0 37 ..................................... TCATTTACGTAGTAGTATCTGTAATTAAGTGTAGTAA 9044 37 100.0 37 ..................................... TCCACATAAGGAATTAAAATAATGAAAAAAGATAAAA 8970 37 100.0 34 ..................................... AAGCTTAGAAGCTATGAGAGATGGAGCTTACCGA 8899 37 100.0 35 ..................................... ACCAATCCAGAAGCGATTGACGCTACCATTTGAAT 8827 37 100.0 34 ..................................... TCCACAGGATTATCTATCAAGTTGGTTCGATTTT 8756 37 100.0 35 ..................................... ATTTTTGTGTGCTGACTACCCTTTTTTATCTGCTT 8684 37 100.0 33 ..................................... CCAATGCCATGCCTAAAACATCTTCAGCGGTTT 8614 37 100.0 35 ..................................... TATCTACTTGCACGGAAAGACAAAGCTTTCTTAGG 8542 37 100.0 35 ..................................... GGGGAGTTTGCGATGGAATCAGACAACTTACTACA 8470 37 100.0 34 ..................................... TCCATGATTACCTACCAAATATACCCTTGAGGAC 8399 37 100.0 36 ..................................... CCGATGCAGTGACTCTCATTGGTCCAAAGTCAAGGG 8326 37 100.0 34 ..................................... CTAAATTATAGGTAGTTGTACCTTCTATTATTTG 8255 37 100.0 33 ..................................... TTTGCGGGAATATTATATTCCTTCCTAGCGCGA 8185 37 100.0 34 ..................................... CCATTCAACATCAAAAACACACATCACTATACAC 8114 37 100.0 35 ..................................... CGCCTACTGCGGTAATTGTGGAATTAGGGTAGCGA 8042 37 100.0 35 ..................................... AAGCCTAACTTGTGGATAAAGGATAATAACGACTT 7970 37 100.0 33 ..................................... TCAATTATCCATCCTTTAGCAGCAAGCCAATTT 7900 37 100.0 36 ..................................... AAGCGAATGGGTAAGCGATACCCTACTCGCCGGGGA 7827 37 100.0 33 ..................................... CTCGATTTTCTTGCATCATTTTAAGCGGTAAAA 7757 37 100.0 33 ..................................... AGGATACTTACTGGATAAGGAAAGTGACGGGTG 7687 37 100.0 33 ..................................... TTTACATCATTATAATAAATGCCATTTTATAAT 7617 37 100.0 33 ..................................... CATTCTGGCTATTAGCAATAGCTTCACCTTGAT 7547 37 100.0 37 ..................................... AGGGTACAAGAATAGGCGCACAACTAAGAATAAAGTA 7473 37 100.0 36 ..................................... GTGGGGATGCTTCAAGCCGGATCAGCCGCGAGTTCA 7400 37 100.0 32 ..................................... TTTACATAATAAGATATTTATTCCAAAAATAA 7331 37 100.0 39 ..................................... GCTTTATTAGCGCCGTGCCGATGTTTTCGGACACTATAA 7255 37 100.0 34 ..................................... AACTAGCGCTTAAAAAACACACACTAACCTTGAC 7184 37 100.0 35 ..................................... TTTTCATTTTCAACATCTTTATTTTCCGCTATATA 7112 37 100.0 34 ..................................... ACCATACAAGGTGTTAACGACCAATTTGTAAAGT 7041 37 100.0 38 ..................................... AGCGCATAATCAGTGTATAAATCGCTGAAAGTGCTGTT 6966 37 100.0 39 ..................................... AGAATTAGTGACAAGTTGTGACTTATGGCAGGTGGTCAA 6890 37 100.0 39 ..................................... AGTCCTGCTTCCAAAGATTGATTTTTCCGCAATGGCTGC 6814 37 100.0 34 ..................................... TGTTAAAAGCCGTTATAAAGGTATCCGCCGGCAC 6743 37 100.0 38 ..................................... CATATTTGCGATATGACAGCTTTTTGCTTCTTATCAAA 6668 37 100.0 35 ..................................... CCCTTGGGCGATCGCACTCCTAATATTCTATAGTG 6596 37 100.0 36 ..................................... AAACTGATAAAACTTTAGCTTATGTCAACCGTGAGA 6523 37 100.0 34 ..................................... CCACTGTCTGGGCGCTGGTTGTACCACAGTAGAA 6452 37 100.0 33 ..................................... ACTGAGGAGGATGGACTGCTGAGTAATCCCAGC 6382 37 100.0 36 ..................................... TTATTCCAGGATTGATAAGATTTGGAATTATGCAAC 6309 37 100.0 41 ..................................... CCATCTAGCTTGTCTTTGAAAACAGGAGGACCATAGATATT 6231 37 100.0 39 ..................................... TATCAATCTTTTATTTTGTTTTTAATCATGTCTGCATTA 6155 37 100.0 33 ..................................... AACATTTGGGGTATAAGACTTGCTTATACAAAC 6085 37 97.3 80 ....................T................ AACGAACGTAGGGGTTAACGGCCGTTAACCCCTACACAATTGCAATTTCACTTGTGATATAGTGAATCTATAATCGTAAG 5968 37 97.3 35 ....................T................ ATTGGAACTATTGCAACGCCAAAAAATCATTCAAT 5896 37 89.2 32 G...............C...T..........C..... ATTGGAAATATTACTGGAAAGTCTATCCAATG 5827 37 97.3 0 ...............................C..... | ========== ====== ====== ====== ===================================== ================================================================================ ================== 56 37 99.7 36 ATTGCAATTTAACTTAATCCCTATTAGGGATTGAAAC # Left flank : AATGTTGTTATTTCTTACGATATTTCTGAGGATAAACGACGTACTAAAATCCATAGTATTCTCAAGTCCTATGGACAATGGGTGCAGTATAGTATTTTTGAATGTGAGTTAACTGATACTCAATATGCTAAATTGCGATCGCGTCTTAATAAACTCATTAAACCTGAAACCGACAGCATTCGCTTTTACTTCCTTTGTGCTTGCTGTTTTGGTAAAATAGAGAGAATTGGTGGTGAAGAACCCCGTGATCAGACAATTTTCTTTGCTTAATAATGCGCGGATGGGTGGGTGTAAAAAATTCAGATCAGAAAAAAATGCCTGCAATCATTTCTACACAAGCTTTTCATCGAGTTCATGGAGTTCACCCATCCGCGCACCTTGCACAGCAAGAGTTTCAGCTATTTTACCCCTTGACACTTTTTTTGAAATAGATTATCATAAGAACATCCGCGCAACTGAACCTTGAAAACTACATATATATAGGCTTTCAGCATTCCGCT # Right flank : ATTATTAAACTGTAACCTGTCACCTGTTCCCTGTCACCTGTTCTCTGTCACCTAATTGCAATTTCACCTACTCCCTAAGATATTGGATTTTGTTCCTCCACCCAAATTACATAATTTATTTCGTGGGTAATTTTGGATGTTCTTGGGAGTATTTACTGACTAGGTTGGATACTTCCGGGTTATACAGTCGCAGGTAATTCCAGTAATTACCGAATACTTGACGGACATAATTTTTGGTTTCATCAAAGGGAATTTCTTCTACAAATTCATCAGGATCTTTTTTGGGTATGGTTTGCAACCATTTAGCTACATTACCCGGACCTGCATTATAACTAGCGATCGCTAACATGGAATTATTGCTATACTGTCGATGAGTATAATCTAAGTACCAAGTCCCCAACATAATATTATCATTGGCATTTTCCAAATTGATTTTTTTGATATCTGCATTCATTTGTGGGGCTATCCACGCTGCTGTACTGGGCATAACTTGCATTAAA # Questionable array : NO Score: 9.19 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:-0.05, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTTAACTTAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.27%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.50,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : NA // Array 1 79510-81312 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJCF01000003.1 Dolichospermum planctonicum strain NIES-80 sequence003, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =========================================== ================== 79510 36 100.0 36 .................................... ATTCTTGTTACATTATCCTTATTTTTTTTCATTGCG 79582 36 100.0 35 .................................... TGAAGGACATCTTTGTTATTCAAGTCGTTGACACA 79653 36 100.0 42 .................................... ACTAATTCAAACAGTAGTTTATAAGGTACGCACACACCACCG 79731 36 100.0 38 .................................... TATATCAATTCCTGATTTGTCTAGCCATAAAAGCAGGG 79805 36 97.2 37 ..C................................. GAATATATTATAAGTTCGTTAATGTTTTTAAGATGTC 79878 36 97.2 43 ..C................................. TCTTCTAGCCAAGCTTTTTTAATAAGTTCTTTACTGGGATAAG 79957 36 100.0 39 .................................... ATTTGCTCATCTGTCAGCACTTCTGGCACTTCTGGCAAT 80032 36 100.0 39 .................................... ATTTTCAACACTGCTTAACCACTTTTTATTGCTTAAATG 80107 36 100.0 38 .................................... CTTAAAAATAATCAATAGATATCTGGGAAAATGCAGAT 80181 36 100.0 38 .................................... AATGCTTGGTTTAGCTGGGATAACCCATCATTTAGATG 80255 36 100.0 39 .................................... TTGTACGCTTAAACACGCGGCTATCATTTGCTCTGATGC 80330 36 100.0 37 .................................... AACCAAGTCAATTTGATATTGATATGGTTCAAAATAG 80403 36 100.0 39 .................................... AGGACTTAGACTCATGCTTAACCTCACTGTTTTTTAATG 80478 36 100.0 36 .................................... ATAGGATTCATAAGCAGCGTCTCTTTTTTCAATAAG 80550 36 100.0 37 .................................... GGATTCAACCGGCTGAACCAACTTAAACCGCAGCTAA 80623 36 100.0 39 .................................... GTAGATAACTCGATATTTAAGCTATTAGCAGTCTGACTA 80698 36 100.0 34 .................................... AAAATAATCAATTTCAGTTCTTCGTCTTGGATGT 80768 36 100.0 42 .................................... TATGCCGATTAATTCATGACTAAGCGCGGTGCAATAGGCTGT 80846 36 100.0 38 .................................... TTTCTATAAACCAGTTCAACTCATTCGCAATGTCGCTG 80920 36 100.0 36 .................................... AACTCATCACTACTGTCTATGTAAAGGTTAAGTAGT 80992 36 100.0 36 .................................... AACTCATCACTACTGTCTATGTAAAGGTTAAGTAGT 81064 36 100.0 40 .................................... AACTGCTGTAAGTTCATATTCCACCTCCGGGTTCATTTGG 81140 36 100.0 37 .................................... TCAAAATTTTTCATTTGTGACTCGTTTAAAAATAAAG 81213 36 97.2 23 ..................................C. GCAAATGGTAGGGGTGAACGGCC Deletion [81272] 81272 36 91.7 0 ......C....TC....................... | A,A,AAA [81276,81282,81284] ========== ====== ====== ====== ==================================== =========================================== ================== 25 36 99.3 37 GTTCCCACTCGCTGGGGATATTAATTGAATGGAAAC # Left flank : TAAATAACCTTGTTGATATCTGACGCACCCTACAACTAATATTTGAAAATTTATCTACAAAAGTAGAGATTTTTTGTATTGCACGTGCTATAATTTTACTTGTAAGTTTTTTATTTTATTTATGGGTTTTTCCCGCCCTGCACCCGTGGGTTATTTTTGACTGAGATCATAGTGTTCTCTTTAACAATCAAGATTTTGATATTTGTAGTTATTGTATCTTGTGCCACAACATAAGAAAAAATTTGTTACTATCTAGGAAATAACATCATATTATATACATCATTATATAATTAGCACAGCAGCTTAAATTTTTGGCAAACCTCCAGTGGGGGCAAAAACCCCAGGGATTCGCCAAATCGTCAGAACCTTGATAATTAAATAATTTCAGTGTTTTGTTAGTTTCAGTTGGTAGTTTTTCTGAAGCCTGAAATCAGGTTTTTTCAGAGGTCTGCCAAAATCGTCTCTGGACTCTTTGCTGGGTAAGGGTTTAAAATGGAAGG # Right flank : CGCCCTCAAAACGCCCAAAGATGAGGTCTGGAATCTTGATAACTTCTATCGGGATTGTGTATAATGGATTTATGGGAAAATAAAAAATTATTAGAAATTGTCTTGCATAATTTACCTACTTTTGCTATACTATTATTAATCAATAAAAACAATTTAATTCCCGCGCTGCACCCGCGGGTTTTTTTTGGCATATCAAATAAAATTATATTCACCATAATCATAAGCATCATCATAATATGATGCTGTTTGCTGTATTCTCACAATAGAAGAAAAATTCTAGGCTTCTATAGCTTGATAGTTGCTATACCAACCAAAAAAAACAGTAAGCTCTTAGAAAGTTTCTACCTAAAAATAAAAATTGAGATGTCAGATTTAATTGAATTAAAACAAATCCCTGATTGGCGCAATCTCTTAAGAGCAGCAATTAAGCAAGTTATAGCTAATAAATCCTAATTTTTGTCCTTCTTCTCCCATTCCTTGGGTATCCTTGTTGATATTTG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCCACTCGCTGGGGATATTAATTGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.50,-1.50] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 1 22056-21283 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJCF01000050.1 Dolichospermum planctonicum strain NIES-80 sequence050, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================================== ================== 22055 36 100.0 38 .................................... ATTAAAACCTCTACAATTTGATCCACATGACTAATCGA 21981 36 100.0 39 .................................... GTCATGATATTAAATGCTTATCCTATAAAATTGTTCATC 21906 36 91.7 36 T.T...............T................. AACGCGAATAGATGACTATTTTCCGCTTGTATTTCC 21834 36 100.0 37 .................................... ACTTCACCATAGATTGATTGAAAATTATTCTCAATAA 21761 36 100.0 35 .................................... TAAAATCTCAACTTCAGTAGCTATATCTCGTATTA 21690 36 100.0 36 .................................... ACCAACTTGTACCCAGAGGGTATGTTTAGTACTTTC 21618 36 100.0 36 .................................... GCTGCCAGTGCGGGACTAGCAATATTAAGAATTGTT 21546 36 100.0 35 .................................... ATTTCTTTACTGGACACTTTGTTCAGCGATCGCAC 21475 36 97.2 38 ..................T................. CCTTTCGACAACATATAGGAACAGTTGATAAATTTGTC 21401 36 100.0 47 .................................... CTGATGATCAAACCCACCTAGGGGCGAACGGCCGTTCGCCCCTACAT 21318 36 91.7 0 A........G........T................. | ========== ====== ====== ====== ==================================== =============================================== ================== 11 36 98.2 38 GTCCCCACTCGCTGGGGACATTAATTGAATGGAAAC # Left flank : ACTTGAGAAATTCCGCGATCCCAAACTGATGACTGACTTTTACAAGCGAGATCCAGGGCATTTTAATTTTGTTTTAGGAGCGATTTTACATGAAAATTAAACTTGAATATTGCCCGTTTGGTGACATAGGCGAAAAAGAATTTACTTTGGCAAGTGTTGAAGTTGAGACGGAGCATAATGATCCTTTCGAGATCATTAATCCTGTTGTGAAAATTAAAAGTTACCCAGCAGCAAGCGACCAAAAAAACAAGCTGAAAGCCGCCGCAGAAAAAGCAAGTGTCAGGAAAAGTATAGAGGAAAGGGCTTTAAGGGCTTGGAACAGAGAGATTAAGACCTCGACTGGATTTCAGGGTCATGCTTATTCCCCAAATAATCTAGACCTGTCTGTTGCCGTTTATGGATTGGATTCTTTTAAGGTTTTGAGTATAGAAGGCAATGAAGATTTTAAAAATAAAATCCCGCCTATTCCAGAAGGAGCAGTTTCATAGTCAGATGTTTTA # Right flank : CAGCTAGTAATAATACATAAGGTGTGAGGTAATTAACTGTGTAAAGAAATGTAAAATCGCTGAGAACTTCTTTACTCTTGCCTCTTGCCTTGCTATAACGACAATTTTCAACGCCAACCTACTTACTCATATTTATTAACAATGAAAGAAAGAATAACTACGCTTTTGTTTTTGATGGTCATATTTTCTATTTTTTTTAGAGCTTGTGGTGGTACTACTACCAGTACCAGCAGTACAGAACAAGAAAAAACAGAATGTGAAGAATTTGCGGAACGGGTTACAAAGAATAGCGGTGGCAGTAAATATTCTTTGATCAAATCTTGTGAAAAAGAAAAAGAGCGTAGTCAATGGGAAAATGACTATGAGGGATCATTGCAAAAATTAAAAGAGAAAAACCGTTAGCCGGAGGACACCTGCTAAATGGGGTAAGAGGTATAAAGGTTTTGTAAATAAAGACTCTAATCCTTTACCCGACAAGGATTGTAAAAACTACTTTTAGC # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCCCACTCGCTGGGGACATTAATTGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [8,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.50,-1.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 2 26800-25793 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJCF01000050.1 Dolichospermum planctonicum strain NIES-80 sequence050, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================================== ================== 26799 36 100.0 34 .................................... TTAAATACTTCTTGGATTAAGTATTTATTATGTG 26729 36 100.0 37 .................................... AAAAAGCTTGCAAGCTCTTCATTGCAACTACGAAAGA 26656 36 97.2 36 ..........................T......... TTCTTTGACAAGAATGATGCCATTGTCAATTACCCC 26584 36 100.0 36 .................................... AAGTTTATTCTCGCAATCAATTAATCTCAGTATGTA 26512 36 100.0 46 .................................... TAATTGAAGAACCATATCTCCAAAGCTGCATTTAGTGTGTTCCCAC 26430 36 100.0 36 .................................... TGACTATTGCCTATATATGCAATCTCTTTCGCGCTT 26358 36 100.0 41 .................................... CGTTCAGTGCGGGGAACTCCGTAATCGTCACCACGCAGCAC 26281 36 100.0 37 .................................... GCGATCAAAGCTTTATGATTGTGGCTTTTCGCATCTA 26208 36 100.0 38 .................................... ACCCCTGTACCCTTCGCTGGAGCAAGAGTTACAGTAAA 26134 36 100.0 38 .................................... ACATTAGGATCTAGGAATTGGAATCTATTGGTTTTAGA 26060 36 100.0 46 .................................... AGGAAAAACGGTTAGCGTTATTAGACATGGTGCAAAACCGCTCTTA 25978 36 100.0 38 .................................... TATTATCTGTGGTTCAGCAACAATTTTAAAATTGTTGC 25904 36 88.9 40 TGAA................................ GTAAAGGTTGTAATTGATATTCACCCAGACAATGACCTTG 25828 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================================== ================== 14 36 99.0 39 GTCCCCACTCGCTGGGGACATTAATTGAATGGAAAC # Left flank : CTTATTGAGTATCCGCCAAAACTATCTATTTCTCAAATAGTAAATGCTTTGAAAGGGGTATCTAGTCGTAGGTATGGGCAAGCTGGCTATAAAAAACCTCATAGAGAAGCGTTATGGAGTCCCAGTTTTTTGCCATTTCTGTAGGAGGTGCGCCACTAGAGATATTAAAAGAGTATATTAAAAATCAAGAAAAGCCGTCCTAGAAGGACGGGGCTTGTATCCCATTATTTTCGGTCAGGTAAAATGGCTGTAATGTTGATTTTTTCGTTGGGAACTTCGGTCGCTTGCTGGGTAAGGGTTTTGGGGGTTTTTTCCCGCTGTCGGTTGGTGGTTTTACCACTTTTTTTCCTGATCTTTGGAAACTGTCTCTGGACACCTTGCTGGGTAAGGGTTTAAAATTGAGG # Right flank : TTGAAAGACGAAAAGCTAGGTCAGGGCTTTGAAAACATAACCGTAGAGTTAGTTGTTCCCATTTTAGAAAGACTAGCTGGCGATCGCTGGTTGGTCTGGTTTCCTAATGCTGTTGTAGCAGTTACAACCAATCCTACAGAGCTAACAATAGAACATGACAATGAACCGCTAAGAGACAAGTGGAGTGAGTACAAACAAGACTTCCTCCGCACTGCTAAACCAGAGTTGGGAGGAAGAATACTGTTCTTCCCACCCAGTGAGGTTTTCTTGCACTCTATCCTGGAGCAGCCAGCTCAGACGGGAGCTAACGTGGCTGACATCCCATTCATCTACCCTAATGATAATGCTGAGGATATAGCTAGGAATGCTGAGAGAGCAGCCTATGAGTCTTGGGAGCTAGTGTACTCTTAGTGGGGTAGACTAAATCTAGTAAATCTAAAAGGTCTATGAACTTCATAAAGCTTCTAGGGTTGTTAACCGCAGCCCTAGCCTTTTTACCC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCCCACTCGCTGGGGACATTAATTGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [8,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.50,-1.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //