Array 1 8792-12647 **** Predicted by CRISPRDetect 2.4 *** >NZ_ANNF01000008.1 Campylobacter concisus UNSW1 Contig_8, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 8792 30 100.0 36 .............................. TCCCACCATTGCAAAACACGAAGTTGCTCACTCGTG 8858 30 100.0 38 .............................. CTTGAAGCTCCACTTATTGCAGATAGAAATGTGACTAA 8926 30 100.0 37 .............................. CTGTGCTACCTTCTCTTGCTTGTAGTAGCTGACAATA 8993 30 100.0 34 .............................. CGAATATAAAGATATTGGTTTAAAAATCAACTTA 9057 30 100.0 35 .............................. ACATTAGTAAATAATGAATATAAACGTATAGCAGA 9122 30 100.0 37 .............................. TATCAAGGATAAAACCTTGCTCGCCGTAAATTTCACT 9189 30 100.0 36 .............................. TGTTTTTAGATAAATTTTGCTTTGTTTTTCGCTTCA 9255 30 100.0 35 .............................. GTAGGCTACCGCACTCGCTGCATTGATATTTTACG 9320 30 100.0 34 .............................. GCACCAAACGAACGCAAAGGGCAAAGATTAGCGC 9384 30 100.0 34 .............................. ACTTCGCTTAATGCTTCGCTAAATAGTCCTATCA 9448 30 100.0 36 .............................. TTTAAATATTCTCCTTTTGTTTCATCGTGAATAATC 9514 30 100.0 34 .............................. GGGTTGCTTTGGGATTGTTTGGGAAAAATAATGA 9578 30 100.0 36 .............................. TCTTTGCCTAGCTTTGGATTTACTAGGGCTTTGCTT 9644 30 100.0 38 .............................. CTATAAATCTCCACCTATCAGTAGCTAGAGAGTTCTTT 9712 30 100.0 37 .............................. CTTTGATTGTATTGGACGAATACGGATCATATCCAGT 9779 30 100.0 35 .............................. AGTTTTGGAGAATAATAAATTCGGCATGCGTGGTT 9844 30 100.0 37 .............................. CCACTTCCTCGCTTGGTTCTATCGTATCGCAAGTCAT 9911 30 100.0 38 .............................. GCTCAGTCCCAAATTTTAAAGATCTGATCCCTTACGAT 9979 30 100.0 38 .............................. ACCTTTGACGGCTTTCTTATGGTGACTGAAATTCTACC 10047 30 100.0 37 .............................. TTGAAGCCATTATAATATGCTCTATCTTGCTCTTGTA 10114 30 100.0 37 .............................. GAAGATCAAGGTTATTCGTTGCGAAATGGTCGTAAGT 10181 30 100.0 34 .............................. ACTTCTATCAAAAATCAACATCAAGAGCAATGGA 10245 30 100.0 36 .............................. GAGTAATTGCCATTTAAAGCACCCCTAAAACAGCCG 10311 30 100.0 36 .............................. CATCTTATATTAGAAGATATTCTTTCTCAAAGTTCA 10377 30 100.0 33 .............................. AATTTATATGGTTGCGTGTTTGTCCTTGACGAG 10440 30 100.0 38 .............................. AAAAAGAGTATCTTTTCGGAATTATCAAGCTTAACCAC 10508 30 100.0 35 .............................. AAAAATAGAAAAGCCCAAGTCGATTATAAAATCTG 10573 30 100.0 35 .............................. CCACTAAAAACAATTGTGCCATTAAAGTCCTTTGC 10638 30 100.0 37 .............................. TCTGATTTAAACAGCTCGCTTTCCAAAATTGTTTTTC 10705 30 100.0 38 .............................. TTATCAATAAAGAGGCTGGGATAAGTGCTGCAAAGAAA 10773 30 100.0 37 .............................. TAGAAAAAATCTTTTTAGGCGTTTTATTTGTTGGTGC 10840 30 100.0 34 .............................. TTTCATCTCCGCTGTATATGGTTATTTCTTTTTT 10904 30 100.0 34 .............................. TAAAATAAAGATGTGTAAAACAAAAGGAAGTATA 10968 30 100.0 38 .............................. AAAATGACTAGACAAGAATTAGCAGAAAAATTAAATAT 11036 30 100.0 36 .............................. CCAACTAGGTTTTTATTTCCTACTTGCTTGTAGTCG 11102 30 100.0 36 .............................. AACCACAAAATTTACGTATCTTTGAAGTGGTAGGTG 11168 30 100.0 35 .............................. TATTGTATAGGTTTGGGGAGTTTAAAAAAGACCCT 11233 30 96.7 36 .............A................ CTATTGACTGCACTGCTGTTTTTGTTTTTTGTAGTT 11299 30 100.0 36 .............................. CAGAGATGCCGAGCAAGGTAATTCAAACGAACCTAG 11365 30 100.0 35 .............................. TACGGTGTTTCGTCCTTTGATGTAGAGCTTTGTCA 11430 30 96.7 34 .........................A.... CTATTTAGCATCATTTTCCTTTTTTGACTTCTTG 11494 30 100.0 35 .............................. ATATGCTTTCAACTTCATTATTGATCGCGTTTTCT 11559 30 96.7 37 ..............T............... ATATATCCGCCTGCAAAAAAAGGGCGACCATGTATAG 11626 30 100.0 38 .............................. TAACCCTGCTAATTTCAAAAGCTCTGCGCCATATTCCA 11694 30 100.0 35 .............................. AAAGCAATAAAGGCTTTGGCATTGATCTAGCTTTA 11759 30 100.0 36 .............................. CAAAATCGGATTTGATGTTGATAGTGGCAAGATAAA 11825 30 100.0 38 .............................. CTAAAACGTTTAATGAGAGCTTGGGTAGATTTTTGAGC 11893 30 96.7 36 .........................C.... TGCTACATATAATGCTGATGATGTTTTTCTTGTAAA 11959 30 96.7 35 ....A......................... AAGAATTATACCATTTTATTTTCGTCCATTTTTGT 12024 30 100.0 36 .............................. CCTAGGCGGTAAAACTCACCCTTATTAAAACCTTGT 12090 30 100.0 37 .............................. CAGCTAAAAAGGGGCTATACCTAAGCTGGGCTAAATC 12157 30 100.0 37 .............................. AAACTTTCATCTCACGCTCTCTTTGCAATATTCGCCA 12224 30 100.0 38 .............................. TCCCAAAGATAGGCGTCCTTTAAAATTATACCTGCCTC 12292 30 100.0 35 .............................. AAGCAAATGGCATATCCATTTTGTAAATTATCGCT 12357 30 100.0 36 .............................. TCGCTCATCTCCAGCATTTCATCGGCTATTTTCTGA 12423 30 100.0 34 .............................. GAATTTCAAGCGATAAGAAAAATGAGAAATGGAA 12487 30 100.0 36 .............................. AAATCTCTTTTGCTTTTTTAATATCATCGCTTTGGC 12553 30 100.0 35 .............................. CTTCATCCGCTGTCATTGTCTATCCTTTTTTAGGG 12618 30 93.3 0 .........................T...T | ========== ====== ====== ====== ============================== ====================================== ================== 59 30 99.6 36 ATTAGAATTTACTCCGTTGGAGTTTGAAAC # Left flank : AGCTAGATCCTCGCATCGGCTTTTTGCACGAGCCAAACTACCGCGCGCTAAGCCTACATCTCGATCTTGCGGAGATTTTTAAGCCGATCTTGGGCGATACGCTGATTTTTAACATGCTAAATAAAAAAGAGATCACCGCAAAAGACTTCCAAACGGACGCTGGCAGGATAAAATTTAGCAACGACGCCGTGCAAAAGATCGAGCTAAAGATGATCTCGCGCCTTTGTGAGACGCTCACGGTGGGTGGTAGGGAGCTAACGTGGAGGCAGGTGATCCGCCGCGAAGCAAATAAGCTTAAAAAGTGCATCTGTGAGGACGCGCCTTATGAAGGCTTTAGGTGGGAGTGAAATTGCATTTTAATAAAGCGTTTTTTAAGATTTTAAAAAGCTTGAAATTTAGGGCTTGGCGTATTTGCACATGGCTAAATTTTAGTCAAATTTAAGGCGAAAAAATATAGACTTCTTGCACTAGAATGCCTATAAAATAGGCTTTTTGGTGCT # Right flank : TCTTAAAAAAAGATATCCTTAATCAAAAAGCTTAAAATTAAACTTTAAATTTAGTTTGATATATTAAATTATTAACATGAGTATTGATATTTTAAAATATTTCTAAAGAAGTTGGACCCAAATATGGGTCCGAATAAGGTAGTTATAGACCTTCAAAAGGGTTTGAAACTACGTCTTTGCGATCAATTATATAAGGTATGATGGCTGCGTGACGAGCTCTCTTGATTGCTTTTTCTACCATCTCTTGATATCTTTTTGATGTGCCAGTTAGGCGTCTTGGCATGATTTTAAATCTCTCTGACAAACAATACTTCAAAAGTGAAGTGTCTTTGTAGTCTATAAAATCAATCTTTGCTTCTGTAAATTTGCAATATTTGCGTGAATATTTTCTTTTTTCTGCCATTTCTTTATCCTTTAAAATTAAAACGGTATTTCGTTATCGCCTTCAAAATTGTCAGCGTCAACATTTATATCAGGGATTTTCTCTTCATAATACTCTT # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTAGAATTTACTCCGTTGGAGTTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.60,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA //