Array 1 1225303-1227043 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP033931.1 Chryseobacterium bernardetii strain H4638 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 1225303 47 78.7 30 T.ATAT..GAAG........A.......................... AATGTACTGAAGTACCTTTTGAAGGTAAAA 1225380 47 97.9 30 ........................C...................... AAAGCCTAAATAGTAGAAGGGTAACCCTGC 1225457 47 97.9 30 ........................C...................... TATTTTTTTTACTTCCTTCATGTCTGTTTC 1225534 47 100.0 30 ............................................... AACACACTGCTTAATATGCATGGCCATAGC 1225611 47 100.0 30 ............................................... CAGGTATAATACCACGATTAATAGCCTCTT 1225688 47 100.0 30 ............................................... CTCATTCTTTTGGCCAGCAGCAATGACATT 1225765 47 100.0 30 ............................................... ACAAAAAGGGACACAACGTCACCACCGATA 1225842 47 100.0 30 ............................................... CGGCGGGAACTTATGATGAATTAAGGAAGT 1225919 47 100.0 30 ............................................... TTCTACGGTCTTTGATAGATCGTTAGTTGT 1225996 47 100.0 30 ............................................... CTATCCACAGATATCTTCCACTTATCACCA 1226073 47 100.0 30 ............................................... GATATAGCAAATATATAACATTGTTCATAA 1226150 47 100.0 30 ............................................... ACAACAACAATTATATCATATGTCACACAA 1226227 47 100.0 30 ............................................... GCGATGGACAAATCATTATTTTATACGCTA 1226304 47 100.0 30 ............................................... TAGGGTCCTGTACTAATACACGAGAGCCGT 1226381 47 100.0 30 ............................................... CTCCATTTCCTCGCCTAACAGCCTCTAAGC 1226458 47 100.0 30 ............................................... CAGGATTTGCTGGGATTGCACATACTGCCA 1226535 47 100.0 30 ............................................... GAATTGAAGTTTTTGAAGAAGACCAGAAAA 1226612 47 100.0 30 ............................................... CGTCAAAAAGTCCTGAAAGGCATCGCCGCC 1226689 47 100.0 30 ............................................... AGTTCAGGAGTAGGTAAGGCATTGGTCAGA 1226766 47 100.0 30 ............................................... TATAGGCACAATTGTAGGCATACCTCTTAC 1226843 47 100.0 30 ............................................... CCTGCAATGGCTAAAGACAAAGGAAATATT 1226920 47 100.0 30 ............................................... TTTCCTAAAATCAGGGAATGGTTCAAATAT 1226997 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 23 47 98.9 30 GTTGTGAATTGCTTTCAAAATTTATTATCTTCGTGATTAGTCACAGC # Left flank : TTTTTTTCATATTATTGAACTGTTTAAAAAAGTTTGTTGTTTTCGGATACAAAAATAGAAAAACCACATGGGTCTTCTCTTATCATACATCAAGAAATGTAATTTTTTCTACCAACGTTAGGAATTATAACATGGTGTAAAATAAACGAGAACTGAAACGATTTATTTCATCATTATATATTATGTCTTTCCATATCATAAATTTTCATCAGCCTTTTACAATATTCAAGTAAAATATTTTATGTTAAATCCCAGAACCAAGAATAATTTATATATTTAGCCGTTACAAATTAAAACTATACTATGAAAAAATTCAAAAAAATCTCCAGAGATCAATTAAAAAAAGTAAATGGCGGAGGTAACAGAGATGGTATTTGCCAGCCACAATACATGCTGATTTGCGATGCCGTTGGAATTTGCGGACCAGAGCCAGACGCTGCTTGTAATTGTTATTGCGTTCCTATCTAATACAATGAGATCCCTCAAATTAGAGGGATTTT # Right flank : CCTCAAAATTTAATCCACTGAAATTCAGTGGATTTATTATTTAATCAGGATTTAAAAATCAGAATAATTCCAGTTGCTGAAAGGTTGGAGGCGGCTCTTCCTTATTTCTGGCAAAGAAAATTTCAATATCTCCAAATTGTTTGTCAGTAATACACATAATGGCAACTTTTCCGGCTTTCGGAAGCATAAACTTAACTCTTTTAATATGAACCTCAGCATTTTCCCGACTCGGACAATGGCGTACATACATTGAGAACTGAAACAACGTAAAGCCATCATCAATAAGTGCCTTCCGAAAGCGGTTGGCATCTTTCATATTCGCTTTGGTCTCAGTCGGGAGATCGTATAATACTAAAACCCACATAATCCGGTATGCATTAAACCTTTCGGCATTCATATCAGTTCAGGATAAGAAATCAATCTTTTTTCACCAGTATAGCATTTGTAAAGCGACGAAGCTGTTGTTTTAACAGCAACCAGCAGTGGTCTCGTTTTATCGT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAATTTATTATCTTCGTGATTAGTCACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.50,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.41 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //