Array 1 8376-8767 **** Predicted by CRISPRDetect 2.4 *** >NZ_PYNH01000029.1 Photobacterium kishitanii strain calba.1.1 CFSAN065466_29, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ====================================== ================================= ================== 8376 38 100.0 33 ...................................... AGTTGAAAGCGATGTATGCGAAAGATGCGTACT 8447 38 97.4 33 .....................................C TTTATTCCCTGCTTGAAAGACGGCGTACATTAG 8518 38 100.0 33 ...................................... GCACACTCACGAAGAATCGCATTGAATGTTGCA 8589 38 100.0 33 ...................................... TATGATTCGTGTTAAGTACATGATGCATATGAG 8660 38 100.0 32 ...................................... CTAACTCTGCCTGTTGATAAGTTAACGTTTTC 8730 38 86.8 0 ..............................GA..A.AC | ========== ====== ====== ====== ====================================== ================================= ================== 6 38 97.4 33 GTCATAAATGACATGCCCTGTTTGAAGGGATTAAGACT # Left flank : AATGACTACATCTTAAAGGCTGCCGACCTATTTTTTTCGGTGACAAGTTTGTGTAAAAAACACGATATTCAATGGGGAGATTTCACGCGCAAATAATAATGAAAAACCATAACCCTCGGTGCGTGAATCTATAAACAAGCAGGTGGATAGCAAGAAGAGGCAACTTTTTTTATTATCAATGGTTGGCAACATCAATCATTAGAAGTAACAACCAAAGGAAAAAGCTTCAACATTATAAAATAGGGTAATGAGTAAAATGACAACTATAAACCGATAAAGCATTCACAATATTTAACAATTTACATAAATTTAACATTTGTTTTCTCGGTTTTCAGGAAATATCTATGCCAACAGAAATTTATTTAATTTAAGCTATTGATTATTATGGTGTGTAAATTTGTTGGCATTTATATTGCTTTATTTATAAATTTCACGTATTTAAAACGGTTGTTTGAATGAAAACTTGCCTTTTATAATTCAAGGCCTTAGAATTTGAGCTT # Right flank : CCGACATCGCAGTCGGTTTTTGGCCCTAGTTATTCATTTCCTAGTGACATCAGATCTTATGAACGCTGGATTTAACCATTGTGGGCCACAATTCTCGGCTCAAATCCCCTTTATTATTTTCCAATGACCACTTATATTGCTCAAGTAACGTGATCCACTGTTTTACCCCTACACGTTTGTTGGGATCATGCGCCCCCTCGGTAAATGTCTGAATAAACGCCGTTTTTAACTTAAAGGTTAAATGACTCCACCATATATACCACGGACCTACTGGGATCGAACCTTGATTGCCTGGACGAATTTTTTGTCCGTAAGGGAAGTGCCCCTTTTTAATGTTCTCAACCGTACTGGTGCCACCGATATGCTCATAAGGATGACGGCCACTCATTAGCAGCATGAAACAAATTACCGCTAAGGAAAAACAATCACTGTTTGCATTACGCTCAACATCGCGTAAATTTTTCCCCTGATGCTCTGGTGGGATCATCGCGTCTTGCCCG # Questionable array : NO Score: 3.13 # Score Detail : 1:0, 2:0, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCATAAATGACATGCCCTGTTTGAAGGGATTAAGACT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.53%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.10,-3.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA // Array 2 18053-17011 **** Predicted by CRISPRDetect 2.4 *** >NZ_PYNH01000029.1 Photobacterium kishitanii strain calba.1.1 CFSAN065466_29, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 18052 37 100.0 35 ..................................... AGCTGACGAATGTAAGCCAAAGACAATGGGAATGT 17980 37 100.0 35 ..................................... CCGTTTTGAGAAACAGAGCATGTGTCTTTTGTTAC 17908 37 100.0 34 ..................................... GTAAGTTTGTCGCCTTCTTTAATAAGGAGGATAT 17837 37 100.0 35 ..................................... TTATTGATGAGCTTACTCATCACATTGTTATATAG 17765 37 100.0 36 ..................................... TAAGTACATTATTTCGTAATTGTCTAACTCTTTCAG 17692 37 100.0 36 ..................................... CCCAAACAATTAGCAGTATGTACCCAGATTCCTTAC 17619 37 100.0 34 ..................................... TGAATAGCATTTATCATCTGGGTGGTTGGTCTAG 17548 37 100.0 35 ..................................... TTAAAACGTGGAAGTAGTACGTCCACATTCATGTT 17476 37 100.0 35 ..................................... ATATCATTAGGGATAGCACTCGTAAAGTCACGTAC 17404 37 100.0 34 ..................................... CTCTTAAGAACAGTACAAGATGAAGCTAACATAT 17333 37 100.0 34 ..................................... CTCTTAAGAACAGTACAAGATGAAGCTAACATAT 17262 37 100.0 35 ..................................... CATTGAATGTTGCAGTTATAGTTCTCAGTGATTGT 17190 37 100.0 35 ..................................... TTATCGCCAGTTACAGTACCGCCAAGTGTTTTAAC 17118 37 100.0 34 ..................................... CCGTTAATATCAGCATCATTTACAATAAAGTCAG 17047 37 89.2 0 ....................C..........A..A.A | ========== ====== ====== ====== ===================================== ==================================== ================== 15 37 99.3 35 GTCAGAAATGACATGCCCTGATTGAAGGGATTAAGAC # Left flank : CCAACCGTCCTTCCCCGCGTAATTTAGGGGCATATTGGACATCATTAATGAGTGTAAATTGTAACCGTACTGGAATAAGCATCGCACTCGTTACCTTGCTATTTATCAATGCGGATATGTTAACGCTTTACGCAGATTAACTTGATAAGACAAGTTTGTGTAGCTTCAGCGCCGTTAACACGATGCTCGGTATAAACAAGATTTTTATGTCTAAAAAAGGAGTTAACGAAAAATAATTAATGGTAATAGTAGTTAATTTCCCCATAAACGACTATATTATTCACAATCTTTAATATTTAACATAAAATTAACATTCATTTTTGCAATATTAGGGAAATAATCATGCCACCAGAAATATATGTAATTTAAGTTATTGATTATTATAAGCGTTAAATTTATTGGCATTTATATTGCTTTATTTATAAATTTTACGCGTGTTTAAAATGCTTGTTTGAATGAATTATTGCCTTTTATAATTCAATGCCTTAGAATCTGACCTT # Right flank : ACCGACATTAATGTCGGTTTTTTAATTGCTATTGCCACGCTATTATTAAAACACAAAGCCATTTAAGCGCTCATCGCTATGAAATAATGGCCATTGGGTGTTATCACCTAAGTGAAAACTACCCGCAGGGGTTGAGAACGGTAAACACAACAAGCGATCTTGTTCTTTATCCAAGCTTAAGCCTAACTTTTTACACAAGCTTCTTTTCTCACTCGGGGTTAATGCGATCACAAATACTGATTTTTGCAAACACCAGCCCGCCTCACTGCAAAGCTTATGAATTTTCTTGAGCCGTTTCGGGCAACTAATATCATAACTAAACAACCACAATGGCTTAAGCGACATTATTCAACTCCTGTTGTAACAACACCCGTTTTGCTTTTATTGCCCACTTATGCACCCGTTTTTTATGCTGACGACAAAAACTAAACCATAACGGATAAAACGCTTGTTGGCCTTGTGCTGTTAGTCGACATCCTTGATCAGTATGATGAAAATGT # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCAGAAATGACATGCCCTGATTGAAGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.90,-6.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //