Array 1 8983-6373 **** Predicted by CRISPRDetect 2.4 *** >NZ_PESO01000005.1 Limosilactobacillus reuteri strain RC-14 NODE_5_length_79548_cov_190.197, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 8982 36 100.0 30 .................................... TGCAGGGGAACAGAAGTTAAACTTATTCCG 8916 36 100.0 30 .................................... AACAAAATGTGTATAAAAGTATTGACTTAC 8850 36 100.0 30 .................................... GTGATGGTTACGGCGGAATGTTAAAAACAG 8784 36 100.0 30 .................................... GATATTTTTATTAATTTGTAACATATCGTT 8718 36 100.0 30 .................................... AATAATCAAAAAGAAACAGGACCAACAGCT 8652 36 100.0 30 .................................... TCACCTAGTCTTGCTTTTATAGCCCAAGAT 8586 36 100.0 30 .................................... AAGGGTTCTAAGAATGTAGTTCTTAAAGGC 8520 36 100.0 30 .................................... TCGATGAAGCACTAAATAACCAATTTAGGG 8454 36 100.0 30 .................................... TAAAAGTAGGGATATTATAAGGTTCCTTGG 8388 36 100.0 30 .................................... ATATTGCCAATAAGAATCCCCAAGGTGCTT 8322 36 100.0 30 .................................... TTAAAATATTTAACTCAAAGCGTCGTAATC 8256 36 100.0 30 .................................... GGTTTGTTCAGACATAGCGAAAACCTCCTT 8190 36 100.0 30 .................................... ATTGACGATATAGGAGCGATTAATGATGCC 8124 36 100.0 30 .................................... AATTCAACTTGGTGTTTCCGTTGTAATTGA 8058 36 100.0 30 .................................... CGACTATGCGGGTCTTGAATGCGATTAGTG 7992 36 100.0 30 .................................... ATATCCCAACATATTCCAAAATCTTGCATT 7926 36 100.0 30 .................................... ACTATGATATCCAGAAATTGTCCGATTACC 7860 36 100.0 30 .................................... TGCCTTGTACATTAACGCCGTAATACTTAT 7794 36 100.0 30 .................................... ATAAAGACAGACGATATCATTAACGGAAGT 7728 36 100.0 30 .................................... AAGCATGGAGGAAATCATCTACTAAGCATA 7662 36 100.0 30 .................................... TTAAAAGAAAAAAAGATAAGCCAGTATTCT 7596 36 100.0 30 .................................... ATAAAAAATGGTTGTACGTGCTTGAAATAC 7530 36 100.0 30 .................................... CGGCAGTTGGATTACTGCTGAACAGTATAA 7464 36 100.0 30 .................................... AGAAAGATCTTCTGAGTTGCTTCCTATTCC 7398 36 100.0 30 .................................... GTGCAATTCTAAATGTGTTTGATGCTTTTG 7332 36 100.0 30 .................................... TGGCGACATGACCATAGATAGTGCAAACAA 7266 36 100.0 30 .................................... TTGATCCACTAGAATTGTTAGACGATGTTA 7200 36 100.0 30 .................................... CAAGTGACGATATGATGAAGTATGCAATTA 7134 36 100.0 30 .................................... AAGGGCATGAGCATTATTGAACGTGTTGAA 7068 36 100.0 30 .................................... GCTTTTAGATGGCAAAGTCGTCTTTAACGA 7002 36 100.0 30 .................................... TAGTCAGTGTTTGAACCATTCCCATTGTTG 6936 36 100.0 30 .................................... TGAAAGATCTTCTGTACCATCGCCAACTCC 6870 36 100.0 30 .................................... TCGATGAGATTAAGTTACACCTTTTCTACC 6804 36 100.0 30 .................................... TGAAATAGATTCATTTTTTAGCCTCCTTAA 6738 36 100.0 30 .................................... GGGCGCCAAGCAGAATCATAAGCTACATCG 6672 36 100.0 30 .................................... ACGTACAATACACAACCGACTGGATTACGT 6606 36 100.0 30 .................................... GGTAATCATTCCGTTTGGAGCGATGAGTCG 6540 36 100.0 30 .................................... TACTGACCAAATTAGAGAGATGTTAGATGA 6474 36 100.0 30 .................................... GTGGTTATTGTGGTTCAACTTTAGCAATCA 6408 36 88.9 0 ...............T........G.......T..T | ========== ====== ====== ====== ==================================== ============================== ================== 40 36 99.7 30 GTTTTAGATGTACTTCAAATCAATAATGTTTAGAAC # Left flank : GAATAATAATTTAGCAACAATTTATTCAACGGAAATTGTAAAGTCAATAATAAAAAATTTAACAGAAGAGGATCGTCATTTGCTAGATGCTGAAGCACGTCGGCTTTATTCGAATGTTCAAGAAATTTTATTTATGACAGATTTACCGCTCGAAGTTCGTTACGATGGTGACATCAAACGATTATTAAATTATTGTAAGATTAAATTTTCACCATTAGTTCAGCAAAGCCCTTATGATATAATAAAAACAGATTTAAAGTTACATTTAGAATGTGCTGATAGTTCATGTGTTGGGTTAAGTAATGTCGCTAATTACCTAGATTCAGCTCAATTTAACGAACTACAACAACTAAACATTGAATTGAAAATTCCTGTTTTATTAATAGAATTCACAGAAATAGATAATCGTAAATACTATGGAAATGCGGATTTTTATTATATTGACAAGGATTTTGTTGATTGGAAGTTATAAACTATTAATTCAAAATTAGAAAATAATG # Right flank : TACACGTAAACTATAACAATCACAACGATGATATTTTTTGATATCCTCCATCACGTTTTCCCCGCCAACTTCAGCGGGGCTTTTTCATTTTCTTTTCAAACTAGTGTATAATATTTACTAAACCCATTACTAAAAGAGGTGAAAATGATGGCGACAATTAAAGAAATTGCGGAAAAATCAGGATATTCACCAGCAACGGTATCGCGCCTTTTGAATAATGACCAAAATTTATCGATCAGTCCAAGCACCCGCAATAAGATCATGACGGTGGCTAACGAGCTTGGCTATTGGAACAACCACAAGAAAAACTCTCAGCAGCAACCAATCCGTCCTAACCTCGCATTATTGTATCGGGTAAGCGGTAAAGAACAACTGCAAGATGAATATTTTGCGTTTTTGCGCAATGCAATTATTAAAGAAGTCGATGAGGCGGGAGCGCAAGTTGAAATCTTTAGTAATATCAAAGATTTAATTGCGGCGGCTGATTCGTTCCAAGGATT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGATGTACTTCAAATCAATAATGTTTAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [68.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA //