Array 1 435-1062 **** Predicted by CRISPRDetect 2.4 *** >NZ_LSJQ01000032.1 Erythrobacter donghaensis strain CCH8-A2 CCH8-A2_contig32, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 435 36 100.0 30 .................................... GACAAGCCGCTGTCGCCAATCGTCAGGTCG 501 36 100.0 30 .................................... TGCTGCTACCCCTTCCCGCGCGCGCGTCTC 567 36 100.0 30 .................................... ATCGACGGTCGCCAGAAATTGCTCGGCAAT 633 36 100.0 30 .................................... TTCTCGATGCGGTGCTGCGGGAACAGCCGC 699 36 100.0 30 .................................... TGCCGGAATGGCCGCTGCCGCGAACCGAAG 765 36 100.0 30 .................................... GAAGCGCTCGCTCAAGAGCGACATCGCCAC 831 36 100.0 30 .................................... CCGCCTGAGAGCGATGAGCCGCATTTCTCG 897 36 100.0 28 .................................... TCGCTGTCTTGCCAGCGCCGCTGTTTGA 961 36 100.0 30 .................................... CCGCGCAACGCGGCGGATACGGCATATTCG 1027 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 10 36 100.0 30 GCCGTGGTTTCCCTACCGATTTGCCCATGGTAGGAC # Left flank : CTTTTGCACCCGTCGGCGCGGCCGCCGATAAGCACAAATATAAGCACTAGGACTGATGAAGCCGAGCGTATCCAGAGCTTGAAGGCCGAGATCGATGCCTCCGCCGGACCGCCAAAGCGAGCGACGCGGCGGCGCTTGTCGTTGAAGGAGAAGATCGCGCTGCTCTTGGAGGCCGAGCGTCATGGCGAGACCATCTCCTCGGTTGGCCGGCGGCACGGTATCTTGACCAGCGTGCTGTTCCGCTGGCGCGACCAGCGCGATGTGGCGCGACGGCACTTTTTTCAGCGAGTGGCGGATGACGTTCTCGATATCGAGGAACTTGCGCTTGAGGTTGCGCCGCTGCACCAGCAGCAAGGGCGCCATCTTGGCAGAAATCCGGCGCGCGCCGCGCCGATCGACATAGCGGGCCATCCTTGGCCCGCTATGTCGATTTCG # Right flank : A # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCGTGGTTTCCCTACCGATTTGCCCATGGTAGGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,10] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GCCGTGGCTTCCCTACCGATTTCCCCGTGGTAGGCT with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.80,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [31.7-1.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 1 8222-8055 **** Predicted by CRISPRDetect 2.4 *** >NZ_LSJQ01000608.1 Erythrobacter donghaensis strain CCH8-A2 CCH8-A2_contig615, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 8221 36 100.0 30 .................................... AGCGCCGCCGTGCCCTGCTGAAGGCCCGCG 8155 36 100.0 29 .................................... ATGACCTGCTGCCCATGGCGAATCTGCGC 8090 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 3 36 100.0 30 GCCGTGGTTTCCCTACCGATTTGCCCATGGTAGGAC # Left flank : GGATACGGCATATTC # Right flank : AGGTCTACGGTAACGGATTGGAAATGCTGTGATTTTCGCGGAGATTTTCCGCCGAAATCACAGCAGAACCATCTGGGATGGCCCGACTTGTTCAGTTTTTGGCGCGGTCCCTAGCATCAATTCCATTCTGCCATACTGCTTGTCCGTAACCTGGAGCGTCCTCACGCTGCCCTCCTTGGGCAGGCTGCTTCGCACCCGGCGGATATGCTTATCCACAGCATCTTGCCCCCGGCAGACCCTCGCGTAAACCGAAAGTTGCAGCATCATGTAGCCGTCCTTCTTGAGGAACTGGCGAAATTGGCTCGCTCGCCGTCTCTGCGGTTTTGTTTTCACCGGCAGGTCGAAGAATACCATCAACCACATGAAGCGTACCTCGTCGGCCTCCATGCTTAGTTGCGCCGAGCCAGCGGAAGCGCCGGTGTGTTCAGCGGTGTGGCGTTGCCGGCTTCGATCGATCTGACCAGACTGGCCGCGACCGCCTCTGTTGCTGCAAGGATCGT # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCGTGGTTTCCCTACCGATTTGCCCATGGTAGGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GCCGTGGCTTCCCTACCGATTTCCCCGTGGTAGGCT with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-3.80,-4.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [51.7-13.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.5 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //