Array 1 94605-97932 **** Predicted by CRISPRDetect 2.4 *** >NZ_LBGP01000003.1 Vibrio metoecus strain YB5B04 YB05_B04_contig_3_consensus, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 94605 28 100.0 32 ............................ AACAAGTGAGAAAAGCTAATGAATGGTGAAGA 94665 28 100.0 32 ............................ GTTGGATGCTTGGCTTGCTCGCTTTGGGTGCG 94725 28 100.0 32 ............................ GTCAAGTGTGGCGATTATGGGGCGATACTTTC 94785 28 100.0 32 ............................ GTCTAGCGTGATAGCTTGCAAGAAGTCGCCCT 94845 28 100.0 32 ............................ GCGGACGGCGCAGCGTGACCGCCTGTTAACGC 94905 28 100.0 32 ............................ AACTACATTGCTGTTGTACAAGTTAACGATTA 94965 28 100.0 32 ............................ TGACGTGATACTCGCGGCATTTGCTTGTGAGT 95025 28 100.0 32 ............................ TTGCGCAGTTGCGCGGTTTCAAAGTGCTTGGT 95085 28 100.0 32 ............................ CAAGCCTGAAAAGCCTAAGCCGCCGCCTAGAA 95145 28 100.0 32 ............................ AATTGGAACAAGCCACAGCGCCAAGCACCTGC 95205 28 100.0 32 ............................ ATCTTGAGATGTGATGTTGTTGTTATCAGACG 95265 28 100.0 32 ............................ TGAGGCTCTAAATACGCGTGTCATCGCTCCTT 95325 28 100.0 32 ............................ AATCACAGTTTATTGGCGGCTGGCTCGACGTT 95385 28 96.4 32 A........................... AGACCACGGCGGAAACAGTCACACAACAAGTC 95445 28 100.0 32 ............................ GGAGTGGGCTGTGATGGAAATTAATGTCGATT 95505 28 100.0 32 ............................ AACTTGTGCTCATCAAGCGTAAAGGCCATAAC 95565 28 100.0 32 ............................ TTCACGGATAATGGTGCTGACTTTGTTTTCGT 95625 28 100.0 32 ............................ AGAAATGCAGTAAAGCGAGTAAGCACAAACAC 95685 28 100.0 32 ............................ ATGAACAGCTACGCACAAAAGCTGCTAGAAAC 95745 28 100.0 32 ............................ GTTTACAGCTACATACAAACTCAAGTGGAACA 95805 28 100.0 32 ............................ TTTATGCCTGCCCTGCTTGACCTTTATATTGT 95865 28 100.0 32 ............................ TGACAAATTGAGCTCATCAGCAAGCGAAAAGT 95925 28 100.0 32 ............................ AGTGATGAGCATTAACGGCGGCTCAGATAATG 95985 28 100.0 32 ............................ TTTTTAGAGTTGCTTAACCATGAAATTAGCTA 96045 28 100.0 32 ............................ GCAAGAATCAGAAGTCCATTGCTGATGTGTTC 96105 28 100.0 32 ............................ AGAAACAGCTTTCAGTGCTTGAGCAAATCCGT 96165 28 100.0 32 ............................ TTTGCTTTTGGCAGGTTGATGACTTGCTCACC 96225 28 100.0 32 ............................ TGCCAGCCTATATGACGATTCGCAGTATCAAG 96285 28 100.0 32 ............................ ATCAGCATCCGTAATGGTAGCGTTAGTTCCTA 96345 28 100.0 32 ............................ TACGCGAGCGGCGGGTTTAAAGTCGCTCAACT 96405 28 100.0 32 ............................ AGATAAAGCGGGTATTCTAGAGTATGCAAAAA 96465 28 100.0 32 ............................ GTGCGGATTGTGATATCAAAAATGTAGCTGGA 96525 28 100.0 32 ............................ TAAAGAAAGTGGCAGTGCAAAACGGCTGGGCA 96585 28 100.0 32 ............................ TTCCGGTGTGTATCGTGGTGGCTCGTCTTTTA 96645 28 100.0 32 ............................ CAGCGTCATCCTTTAACGCCGATTGAACAAGT 96705 28 100.0 32 ............................ AGCAGCCGCTTGTTGTGAGGCAATTCTCGCCA 96765 28 100.0 32 ............................ AAATAGCGAAGATGTGAATGATTAACGCTTTC 96825 28 100.0 32 ............................ GCGAGCTGATTGCATGATTTTCTTGCTACGTA 96885 28 100.0 32 ............................ AACTTGGTGCGGCGTGATCATGGATACCAACT 96945 28 100.0 32 ............................ ACATCGATGCAGAGCTACTGGCGTATATCGTG 97005 28 100.0 32 ............................ TTGCAACCTCATAGCCTTTTGAAACGAGGTTA 97065 28 96.4 32 ...........T................ GTTATCAAGTTCCTCTTCATTCAAAAAGCCAT 97125 28 96.4 32 ...........T................ GTCAATCGTTTTCACTAAAACAGGTTAAATAT 97185 28 96.4 32 ...........T................ ATGATCAACGGTACATGAAAACGGAGATCTTC 97245 28 96.4 32 ...........T................ GCTCAAATTGAGCCACTAAAATTTGAGTACCG 97305 28 92.9 32 .........T.T................ AAACAGCGAGAAGTTGGTTTCCATCGGTCCCA 97365 28 96.4 32 ...........T................ TTGCTCGGTTTCGCTGTTCGAATTTGGCGTTT 97425 28 96.4 32 ...........T................ TCAACAAAATCACCGCCGTAGATTTCGTGAGA 97485 28 96.4 32 ...........T................ CGCTCAAGTGGTCGTAAGAGCTTTTCCTACAA 97545 28 96.4 32 ...........T................ ATTGCCATGGTATCATGCCACTCCAGCTGGTG 97605 28 100.0 32 ............................ TTCGATCCACCTAGCGATTCAGAAATATGTTG 97665 28 100.0 32 ............................ GAAAATCGCCATTTTACGGCTAGTCGGCGTAT 97725 28 96.4 32 ...........T................ GTAATTAAAGCCCTCTTCACTCCCTAAATAGG 97785 28 96.4 32 ...........T................ AGCAAGTTGGTGCGGGTTTTCGCTTCCATTCC 97845 28 96.4 32 ...........T................ GCGCTAGGCATATCGAAATCAGACGTCAAAAC 97905 28 85.7 0 ...........T.T...........TT. | ========== ====== ====== ====== ============================ ================================ ================== 56 28 98.8 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : GATGTGACTTACGTAAGCTTTGTACGCAAGCAGGTGAAATCGCCCGAACGAATAGAGCGGGATATGCAGCAAAAAGCCTCACTATGGGCTGCAAAATCCGGCAAACCGCTGGTGGAGTGTTTAGTGGATTTGCAACAAAGCAAGCCGACAGCGTTGTGCGCCTTGCCCTTTATTTACTTGCATAGCCAGCAAACCAAGCTGCGAACCCCAGAAAAAAACAGCAAGTTCCCGCTGTTTATTCAGATGCAGCAGCAAAGCACATCACAAGATGGGAGCTTTGATTGCTATGGCTTGAGTAGCAAAGCGAATGGACAGTCAATATTGGCGACCGTACCGCACTTTTAAATTGAACGAAAAAGGGTAATTTTTACCCTTTATTTTTGCTCTTTAAAAATGTGCTTTTAAAACAAATAGTTGCAACGGGTTGTTTTTAACAAGGTAAAAAGAAAATTTTTATCCTAACATCCTGTTGCAGCTTATTTTTATCGGTTTATTCTATT # Right flank : AGAAAGTGAACCAAACGATGCAGTTCACTTTCAACATTTTAATGAGGTTCCTACTTTATATTGTGCATATTCATTATGACCTGCCTAATGGTGCTTTCGATATCAGGAGTCACCTCTTTTCGAGGTGTTGCGAGTTTTTTCAAGAGTTCTGCCTGGCGGTAGTCGGAAACATCACCATAGCTGTAAAAAGTAGTCAGTACGCCTTCATGACCTAAGTTTTGGCTCCAAGCTTTAAACTCTTCCGCGTTGCTACATAATTGCTCCCCTAAACGAGCTAGTGTGTTGCGAAAGCTATGTGGGTTGTAATAAGGCAATCCTGCTAGTTTGAAACTTTGCTTGAAGATTCTTCTGATTGGGTTTGCTGTTGTCCAATGCTCTTTTGTTAATCCCATGGCTTCAAACTGAAAGTTGGGGCTGTTCTTCACTTTCGTTTTTGGGAAAAGGGGAGCTTCTGGGCCGAATGAAAGCTCATTTGTTAGATAACTCACCCATTCGGTAAC # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //