Array 1 215050-215322 **** Predicted by CRISPRDetect 2.4 *** >NZ_LACQ01000001.1 Streptomyces sp. OspMP-M45 YUMDRAFT_scaffold_0.1_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 215050 30 90.0 31 .C.......................A...T GCATGGGCCTGTACACCCGGAACACCTTTAC 215111 30 90.0 31 .C.......................A...G AGGCGAAGGCCGCCATCGCGGACGGTGACAT 215172 30 100.0 31 .............................. CCTCCGGGTCCTCGACCTCGGCGGGGCAGCA 215233 30 90.0 31 ........T...................TG GCACCTACAGCTACAGCGAGACCTTCCGCGG 215294 29 83.3 0 .....................G.T.-..GT | ========== ====== ====== ====== ============================== =============================== ================== 5 30 90.7 31 CTGCTCCCCGCGCACGCGGGGATGGTCCCA # Left flank : CCACGGTGTTGTCGTTCCTCGACCGTCCGGATGTCGCCTACCTGGAGAGTTCGTACTCTGGTGAACTGGTTGAGCATGCTCCGACAGTGGCTGAATACGCCTTAGCATTCGACTACTTGCAGGCTCTCGCGCTCCCGCCAGAGGAGTCGGCCGACCTGATCCGTTCCGCAGCAAAGGAAAGCTATCGTGACCGACCTCTCCCGAGCCGCTCTCAGCGCCGCCGCCTGGCGCAGGTCCAGTTGCAGCAATCAGGCGGGCGGCGACTGCGTCGAGGTCGCTGACGGATTCCCCGGCGTGCTCCCGGTCCGAGACAGCAAGCGCCCCCACGGGCCGGCGCTCGTGTTCGGGGTGCCGGCCTGGTCCGCTTTCGTCAACGAGGTGAAGGTGGGCCGTTCCGCGTAAGGTAGCTAGCCAGGTTGGGTTTTTTGCGTGCAATGTCGGAGTCGGTGAAAGTGCTTCAGAATGACCGATCGCGCTGCTAAACCCCCTGGTCACGCAGT # Right flank : TGCCCACACCGAGGAAGTTGGAGCATCCTGGAACCGTGGCCGAGTTCGCCTTGGTGCTTGACCACTTGCAAGGTTTTGCGCTCTCGCCCCAGGCGTCTGCCGACCTGATCCGCTCCGTCATCGAGGAGAAGTACTGTGACCCCTGACTTCCGTCCCGGGCTCGGCGCCGTCGCCTGGCGCAGGTCCAGCTACAGCAACACGCAGGGCGGCGACTGCGTCGAGGTCGCTGACGGATTTCCCGGCGTGCTCCCGGTCCGAGACAGCAAGCGCCCCCACGGACCGGTGCTCCTGTTCGGGGTGCCGGCCTGGTCCGCTTTCGTCAACGAGGTGAAGGCAGACCGTTCTGCCTATGGAAGGCTCGCCAGATTGGGTATTTTGCGTGCAATGCCGGAGTCGGTGAAAGTGCCTCAGAATTGCCGATCGCGCTGCTAAACCCCCTGGTCACGCAGTCTGCTCCCCGCGCGCGCGGGGATGGCCCCTACGAACGCGCCGTACAACTG # Questionable array : NO Score: 3.61 # Score Detail : 1:0, 2:3, 3:0, 4:0.54, 5:-1.5, 6:0.25, 7:0.01, 8:0.8, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCACGCGGGGATGGTCCCA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,2] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCACGCGGGGATGGACCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.40,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 215772-216042 **** Predicted by CRISPRDetect 2.4 *** >NZ_LACQ01000001.1 Streptomyces sp. OspMP-M45 YUMDRAFT_scaffold_0.1_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 215772 29 100.0 32 ............................. TACGAACGCGCCGTACAACTGGAGCCGGACGG 215833 29 100.0 32 ............................. AAGCTCATCGACATCGACATGGAAGTCGACTT 215894 27 93.1 32 ................--........... ACGACCGACCCGGTGGGTACGGCGATGACCGA 215953 29 96.6 32 ................G............ GCCACGTGATCTAGTACGGCAGAGTTACATAC CC [215962] 216016 27 79.3 0 ................--...G....TGT | ========== ====== ====== ====== ============================= ================================ ================== 5 29 93.8 32 CTGCTCCCCGCGCGCGCGGGGATGGCCCC # Left flank : GCTACAGCGAGACCTTCCGCGGCTGCTCCCCGCGCACGCGGGGGTTGCCGTGCCCACACCGAGGAAGTTGGAGCATCCTGGAACCGTGGCCGAGTTCGCCTTGGTGCTTGACCACTTGCAAGGTTTTGCGCTCTCGCCCCAGGCGTCTGCCGACCTGATCCGCTCCGTCATCGAGGAGAAGTACTGTGACCCCTGACTTCCGTCCCGGGCTCGGCGCCGTCGCCTGGCGCAGGTCCAGCTACAGCAACACGCAGGGCGGCGACTGCGTCGAGGTCGCTGACGGATTTCCCGGCGTGCTCCCGGTCCGAGACAGCAAGCGCCCCCACGGACCGGTGCTCCTGTTCGGGGTGCCGGCCTGGTCCGCTTTCGTCAACGAGGTGAAGGCAGACCGTTCTGCCTATGGAAGGCTCGCCAGATTGGGTATTTTGCGTGCAATGCCGGAGTCGGTGAAAGTGCCTCAGAATTGCCGATCGCGCTGCTAAACCCCCTGGTCACGCAGT # Right flank : TGCCAGTACCGAAACGGATAAGCGAGGTCCGCGACAGTAGGCGACCCACGACCCCGCGCTCGTGTTCGCGGCCCGGCCTGGTCTGCCTTCGTCAACGAGTTGGAGGCGAACCTTCCCACCTAAGAAAACGAGGTGCCGGGCGTGTGAGCGTTCAGCATCCTGGGACGCATGAACGTCCAGGTGACAATGCCCCGTTACGAGATCCGCGCCCAGCACACCGCCTCGACGGTCACCGTGTATCAGGCGTACTCGCCCGCCATCGGGCTGCCCGCCGTACGGGACGGTCGATTCCCGGCAGCCTGGAAGCGGGACCGGATGACCTGGGTCAAACCCAGCTTCCTGTGGATGATGTACCGCTGTGGGTGGGGTACGAAGGAGGGGCAGGAGGTCGTGCTTGCCGTCGAGGTTGAGCGGGCGGGACTCGCCTGGGCGCTGGAGCACGCGGAGCTGTCCCATTATGTGCGTGACGTCCACGCGGACGAGGCAACCTGGAAGCGGAG # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:0.69, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCGCGCGGGGATGGCCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [1,1] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCACGCGGGGATGGCCCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 218645-219532 **** Predicted by CRISPRDetect 2.4 *** >NZ_LACQ01000001.1 Streptomyces sp. OspMP-M45 YUMDRAFT_scaffold_0.1_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 218645 29 100.0 32 ............................. AGCCTTCGCCCGGCTCACGAGGCGGCTGATCG 218706 29 100.0 32 ............................. GACATCAACGAGGACCAGCTGCGGATCATACG 218767 29 100.0 32 ............................. TTGTAGTCGTCCTCGGGTCCTTCGGGGTGGGT 218828 29 100.0 32 ............................. GACATGCGGTTCGCGTACGCGGCGCTGGCGTG 218889 29 100.0 32 ............................. GTCGACGTGCGCACGACCCCGGCCTTCGACAC G [218910] 218951 29 96.6 32 ........................G.... GCCTTGATCGCGTCGGCGACCCGGATGTTCAG 219012 29 96.6 31 ........................G.... CGGCGTCGGCGTGGAGCGACGCGGCGGCACG CG [219020] 219074 29 96.6 31 ........................T.... TGACGACGATGGGCAAGGCCCTGGGTAACGG G [219097] 219135 29 89.7 32 ................T.......GA... GTGCCGAGGTCCATCACGATCGCCGGAAGCCT C [219140] 219197 29 82.8 32 .....T.....A........A...GT... GACTACATCGGTAAAACTGGCCGCCTGACCGG 219258 29 93.1 31 .....T.......G............... AGAATGTGAAGACGCTGCCGTAGCCGGTGGC G [219281] 219319 29 82.8 32 ............T.T......G..GG... GCTATGTAGGGGGCGCCTCGGCGGTATGTGGC 219380 29 82.8 32 ...T...T.....G..........GT... AGCGGGATGACCAGGAAGAACAGGCCCGTGTG 219441 29 89.7 32 ..............T.........GT... GTGGCGGCGGCTCCGTCGAGCAGGAGCTCGCG 219502 29 82.8 0 T...........G...........GTG.. | T,G [219513,219525] ========== ====== ====== ====== ============================= ================================ ================== 15 29 92.9 32 CTGCTCCCCGCGCACGCGGGGATGACCCC # Left flank : CGCATGACGTACAAGTGCCGGCTGAGTGCCGTGGCGAACTGCCTGGCATCCCGGTGCAGTTGTGTGTAACAGCTCCGACGTACCTCACGATTCTCGCGAGCTTCCTGGATGGCATGGGCCATCTCCAACTCGCGCTTCTTGGTGCGGTCGGCGCCCCGCTGGGTAAGCAACGCGCCTCCAAGCGTTCCCGCTACACCAGTGATCGCAATGAGTACCGCCCCCACGTCCATTCGATCAGCCTAGACCGCGTCATCTGGCTGGCCGGATAAGGGCGGCGATCACGACTCGTCGCCTGAATCGCTGCGAGTGCTGATCCGAACGAAAGGCCCTAATTCTGGCTATGGGGGTTCCTGCATGGCCGGTGGTCAACGGGGCAGCCCTTAGGCTGGCCCCCGAGGTAAGGAAGGTTCGTCGCGTTGAGTCTTTTGCGTGTAATGCCGGAGTCGGTGAAAGTGCTTCAGAATGACCGACTGCGCCGGTAAACCTGCTGTTCACGGAGT # Right flank : CGTGTCCAGTTGCGGCAGGTGTAGTCATTGGTGCGGGGGTGTCGCCCGCGGTGTTGGCGGGCCCTCCCGCCGCAACTCGTATCCGTATTGCGGCAATTCGAGAAGTTCATCTACAACTGCGCTTATGAGCCGCAGAGTTGCCACATCTGAGCGGTGCCCCCGGTTCGAACTTCGTTGAGGTGGAGTCCATGTGACCGCCCAGCCCGTTCCCGCGTGGCTGATCACCTTGATGACCACGGCCGGGAGTGCTGCGGCCGCCTGGTGGGTGGGTCGCTGACGGGCGACTCCGACCTCGGGTTCCCGGCCGCCCGAATGCGCGGCCCGAGCCGCCGCCCATGGGCGGAGCGCATGCGTGCGGGAGCTTCCCGGGAGGTGCGAGTGGCGGGCGGTGTCAGCGGTCATGTCCGGCATTCACGCCCGGTCACGCCGGACGGCCTGGCTCCGTGGTCGCGTTCAGGCCGGTCAGGAGCAGGTCGAGGCCGGTGGTGAACTGGTCGCGG # Questionable array : NO Score: 5.50 # Score Detail : 1:0, 2:3, 3:0, 4:0.68, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.56, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCACGCGGGGATGACCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCACGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.70,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-15] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-23.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 4 223196-223470 **** Predicted by CRISPRDetect 2.4 *** >NZ_LACQ01000001.1 Streptomyces sp. OspMP-M45 YUMDRAFT_scaffold_0.1_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 223196 30 90.0 31 ............TG...........C.... GGTTCGTTCGCATCAGGTGCGTTTGCGATTC 223257 30 100.0 31 .............................. ACCGAACCTGCGGGGGGTGCCAGGCCGGGCC 223318 30 93.3 31 T..........A.................. GCCGGTCGACGATCGTCTGCGTCGGCGGGTG 223379 30 90.0 31 ............T............C...G ACCGTTGAAAGTCGGCGTAGTTGAGCGTGTC 223440 30 70.0 0 ...T........TGA.........AA.GAT | C [223445] ========== ====== ====== ====== ============================== =============================== ================== 5 30 88.7 31 CTGCTCCCCGCGCACGCGGGGATGGTCCCC # Left flank : GGTGGACCACCAGCAGGTTCGGCCCGGAGCCGTCGTCCAGGGCGGTGACGGTGCGGCCGTCAGCGAATGATGCGTGAAGCTCAGTCATACGTACAAGAGTGTCGGAGCTGCCGACAACCCCCCTGCCCGCAGGCGATTGAGCGCCCCGCGCGACCTCGTTGTCCGCTTCGCTCCGTGCATGGGCGCGCGTCCGATGGTGTGCTTTCGCGAGATCTCGTACCTGTCCGGCGTGCCTGCACACCGCGTCCGGGCGAAGATCCGTCACGGGGTACGTCTCCGTCCGCAACAGCCCGACATGGGTGCGCTGGGAAACGCAGCAGATTGCGGTGCCGAGACGGCTGATGCCTGACTGATAACTGGTCGTTGGCGGCGGGAGCTTGGCTAGGCTGGCTCTCCGAGGGTAGGGGGTCGTTACATTAGGGCTATTGTGCGTAATGCCGGAGTTGGCGAAAGTGCTTCAGAATGACCGGCCGCGCAGGTAGACCCGCTGGTCACGGAGT # Right flank : TGTCGTAGCGCACAGCGACCAGAACACCGTTCTCACGGCCGAGCCGGAACCGGCCCAGGAGGTGATCGAACGGCTCCTGGGCACCGGACACCGGTGTCACCGGACCAGGCCACCCGGCACCGCGTCGGCCGGGGCGTCAGTGACGAGGTCTGTGTGGCGCGCCGCCTGATATCGCGATCCCCCGGGGCCTCGCGGTGGACCGTCCGTCCCAAGGGACCATCCGTCGCTGGGAGTAGGTCCCGTGCCTCAGGTGCCCTCCGCGCCCGCTGGTTAAGGTCGGTCCGTATGGAGACCTCAGGAACCGGTCGTCGCCCGACGGCGGAGCGCACGCGCGACGTGCTGGAACGGCTCGCTACCGAGCGGGACGTATGGGTGGCGACGGCTCACCCTGATCACGGGCCGCACCAGGTGCCGTTGTGGTTCTTGTGGGACGGGGAGGCGGTGTGGATGTGTACCGGCGCCACTTCCGTGACTGCCCGGAACGTCCGCGTGGAGCCCCG # Questionable array : NO Score: 3.51 # Score Detail : 1:0, 2:3, 3:0, 4:0.44, 5:-1.5, 6:0.25, 7:0.01, 8:0.8, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCACGCGGGGATGGTCCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCACGCGGGGATGGTCCCG with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-8.80,-8.80] Score: 0/0.37 # Array degeneracy analysis prediction: F [2-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //