Array 1 31152-28956 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHQUZ010000033.1 Prevotella stercorea strain MSK.21.23 NODE_36_length_32661_cov_276.694, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 31151 47 100.0 29 ............................................... TTATGCTGAAGAAGCTAAACGCCTTGAAA 31075 47 100.0 30 ............................................... AACAATTTCTTTTTTCAATCATAATCGCAA 30998 47 100.0 30 ............................................... TCTTTGCAGCGTGTTTAAGATTAAACGCGT 30921 47 100.0 30 ............................................... TAAATTCCTTCAGTTCCATAGTAAAAGTTT 30844 47 100.0 30 ............................................... CGTCTTGTCGTTGGGTGATAAACTCCAGCC 30767 47 100.0 30 ............................................... TCTTGTTGTCCATGGCCATCGGTGCCCAAC 30690 47 100.0 29 ............................................... TCCTCCTCGGCTGCTGTCAGATCTACGTT 30614 47 100.0 29 ............................................... TCACCGCTTGTTGCTCCAAGCTTTGCGCG 30538 47 100.0 30 ............................................... CCATATCTCTTGGCGTGAGTATGTTGAGGA 30461 47 100.0 30 ............................................... AATGACCTTTATGACATTCCACCTTCTAAT 30384 47 100.0 30 ............................................... GGTTATGAAGTTTTGTCTTATTCTGATTTG 30307 47 100.0 30 ............................................... AGACTGGGCGAAGATAGAACAGGCGGCAAA 30230 47 100.0 30 ............................................... GGGCGAATCCGTACAACGTGCGGAACTCGT 30153 47 100.0 29 ............................................... TATCTGTCACGCCCTCCAGTGTCTTAATA 30077 47 100.0 29 ............................................... TACCGAGTGGCGTTTTATAACAAAATACC 30001 47 100.0 29 ............................................... TGACCGTTTGAACGATGCTTTATTTTATC 29925 47 100.0 30 ............................................... CTAAAACTCTCATGTTATCCACCACAAAGG 29848 47 100.0 30 ............................................... ACTCTTTATAATTTCCATAGTTTCGTCGTT 29771 47 100.0 30 ............................................... TTTATCTGTTGCAAAGGTAGCAATAATATT 29694 47 100.0 30 ............................................... GGTCGGGTTCTTTCTGCAATGTTGGCTTGA 29617 47 100.0 30 ............................................... CGGTGACGTTAATATGCATGCGTCTTCTGA 29540 47 100.0 30 ............................................... TCGCGATTTTCTCCTGTAGGTCTGGCGTAT 29463 47 100.0 30 ............................................... TTTACTTCTTCCAGCTTAGTTATACGGTCT 29386 47 100.0 30 ............................................... GCCCATGCCAACTGCGGAAGCGAGCGCACG 29309 47 100.0 30 ............................................... GCAAGCACATTCGATTTCTACCAGCTTCGT 29232 47 100.0 30 ............................................... TACCCAAAGCGTGGCATTGACTGGTCGCAG 29155 47 100.0 30 ............................................... TTACGGTTTAGTTGCAGTCGGCAACTTAAC 29078 47 100.0 29 ............................................... GATATTGTCAATCGGTACACGCTTATTGC 29002 47 89.4 0 ........A................................TC..CT | ========== ====== ====== ====== =============================================== ============================== ================== 29 47 99.6 30 GTTGGTGATTCTACCGCAAAGGTAGTTAATTCTGAGCAAATCACAAC # Left flank : TAAACTATAATTTTGCAATGAATCGTTTTAGTGAATATCGAGTTATGTGGATACTTGTTTTTTTTGATTTGCCAACAGAAACAAAGAAAGACATAAAAGAATACACCATGTTCAGAAAGCGGTTGCAACAAGATGGCTTCACCATGTTTCAGTTCTCCATTTATGTACGCCATTGCGCAAGTATGGAGAATGCAGAAGTCCACATGAAGCGTGTCAACTCTTTTCTTCCTGAATATGGAAAGGTCGGAATAATGTGCATCACTGACAAGCAGTTTGGAAACATTAAGCTTTTTTATGGGAAGAAGCCACAAACTCCGAATGCTCCAGGTCAACAATTAGAGCTTTTCTAACTATCGTTCTTTGTTAAAAATACCAAGCGTCATATTAAATAGAAAAAGAGGTCTTCTTAAAATTTGAAGAAGACCTCTTTCTAACACCAACTTTTTATAATTCTAAGAACTATGCTAATTCGCTTATTTACAAGTAAATGCGCATTCTAT # Right flank : AATAACTCTTGCAGATATAAAAACCGAGTGCGTGAAAAAATCTGCCATATCTTCCAGAAATAGCGTAATGGGTTGGAGGTGAATATGATAAGGGCTGGAAGATAACTTGAATGAGAGGGTTATCTTCCAGCCATCTTCCAGCTTTGTTTTTTGCCTTTTATATTATCACCGCTGTGCCGCTGCATGTCACCATGAGCATCGATCCGCCCTGTCCTACGGTTTCGTAGTCGAGGTCGATGCCTACGATGGCGTTGCAGCCGAGGCTCTCGGCACGCTGCGCCATTTCGCGCATGGCTGAGTCCTTAGCTTCGCGCAGCACACTTTCGTAGGTGCCGCTGCGACCGCCGAAGAAGTCGCGCAAGCCTGCCATGAAGTCTTTGAAAACGTTGGCGCCGATGATGGTTTCGCCGGTTACTACGCCGCGATATTCGCGGATGGGGTGACCTTCGAGGGTGGGTGTTGTTGAGAAAATCATAGTATTGTTCCTTTCTTTGGTTTGT # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGGTGATTCTACCGCAAAGGTAGTTAATTCTGAGCAAATCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.80,-6.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //