Array 1 22037-24201 **** Predicted by CRISPRDetect 2.4 *** >NZ_PYOV01000004.1 Photobacterium angustum strain A2-4 CFSAN065426_4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 22037 29 100.0 32 ............................. GTTTGGAACATCCTCACCATCAACAGCATCTG 22098 29 100.0 32 ............................. ACTTGGTAATGAAGAAGCATGACCAAGGAAGA 22159 29 100.0 32 ............................. TTGATTTGAATTAGTTAATGCATTTTTGAAAA 22220 29 100.0 32 ............................. TGTCCTCAATAACCGCGTCAAACTCAACACCG 22281 29 100.0 32 ............................. TGTGGGCGCTTTAGATGGTAATAGTGTCGTAA 22342 29 100.0 32 ............................. CTGTTTGACTGTATGCATTGTACCGTTCCCAT 22403 29 100.0 32 ............................. GTCTGATTTATCCGCACGTGAGTATATAAAGT 22464 29 100.0 32 ............................. TTTACAATGATTTAATTAATCATAATAAAGCA 22525 29 100.0 32 ............................. AACGCGCGAACTATCTTAAAATTATGATTGAA 22586 29 100.0 32 ............................. TTCACCAAGTATATTATGAAATATGCTGAGAT 22647 29 100.0 32 ............................. ATACGATCAAAAACATTATTAATATTGCAAAG 22708 29 100.0 32 ............................. AGGATCACCCTTGATAATAAATCTAGGTTAGA 22769 29 100.0 32 ............................. TTATAAACCTGACGGTCTGTTAAATGCTGAAT 22830 29 100.0 32 ............................. AACATTCACAACAATTTTGAGTGATAGAGATA 22891 29 100.0 32 ............................. CATTTAGTGATAAAAAATAAGGTTGGCTACCA 22952 29 100.0 32 ............................. CGCATTCAGCTTTCAGGCTGCATCAGTGAAGA 23013 29 100.0 32 ............................. ATTCTGATAAACGCCACCGTTGTCATCATTAA 23074 29 100.0 32 ............................. TACAGACTATAACAGCCGAGGATATAGCGAAT 23135 29 100.0 32 ............................. GGATTGCGGAAAATTTCATATCAAAAACGCAA 23196 29 100.0 32 ............................. ATCGTGCGGGTTTTATTAGTCGATACCGTTAT 23257 29 100.0 32 ............................. TAGTGGTACTCAGTATCATTGACAAAACCGAT 23318 29 100.0 32 ............................. TATCTTTTAACGATTGGTTAGCGTTTCGGATA 23379 29 100.0 32 ............................. GGAAATCCCCATGATGAGAATATTGGACCTAA 23440 29 100.0 33 ............................. ACATCGGCACCTAACAGTTCACGCAGCTTTTGA 23502 29 100.0 32 ............................. CTACTAAATAATTCCTGGCTATCTAATTCACC 23563 29 100.0 32 ............................. ATTAAAAACATTTAACTTACGTGACACGAAAT 23624 29 100.0 32 ............................. GTTCGGGCTATTTACGCATTCGTGATATTGCC 23685 29 100.0 32 ............................. GTTAACAAGGCTAATTGTATTGGTGAGATCAT 23746 29 100.0 32 ............................. ACGGCACATTTAGTATTAATCAAACCCCTTCA 23807 29 96.6 32 .............T............... ATCTCGGTATTGTATCCACGTATCGTGACGAT 23868 29 100.0 32 ............................. GGATTTTATACACTTCTATGATTCCGATTTAT 23929 29 82.8 32 ..........T.T.T........G....C TTACCAGGAATCAGCTTGATTGAGGCTTCAGT 23990 29 79.3 32 ..........TG..TA.......G....T ATGCAAATAAAACTTCTATCCAAATCGGCTGG 24051 29 86.2 32 A.........T.T...............T CATGACTCTATAAACAGGATAAAATTCATCAT 24112 29 75.9 32 ........T.TCTT.A.......G..... CAAAAAGCGTAACAAACAAAAGCGAGGCGGAG 24173 29 72.4 0 .C......TTT.T..A...........TA | ========== ====== ====== ====== ============================= ================================= ================== 36 29 97.0 32 GTGTTCCCCGCACCCTCGGGGATAAACCG # Left flank : CACTTATCGATGAAGTACTCAGTGCGGGAGATATTACAGCTCCTGAACCTTATATAGATGCGCAACCTCCTGCTATACCAGAGCCAATTACGATTGGTGATAGTGGCCATAGGAGCAAATAGTTTATGAGTATGCTTGTTGTGGTTACTGAAGTGGTACCGCCTCGATTACGAGGACGTCTTGCAGTTTGGTTATTAGAAGTTAGGGCTGGTGTATATATAGGGAACGTTTCTCGAAAAATCAGAGAAATGATCTGGGAACATATTGAATGCCTTGCTGAAGATGGCAATGTTGTAATGGCGTGGGGAACCAATACCGAATCAGGTTTTGACTTCCAAACTTATGGCAAAAACCGTCGAGAGCCCGTTGATTTAGGCGGGTTACGTTTAGTGAAATTTTTACCTGCAGACATGATTACTGAATGAAAAAATGTTCTTTAAAAAGTTGGTAGATCTTCAATGGTAGTAATTTACCTTTAAAATCAATATATTGTATTTAGA # Right flank : AACCAAATTTACCCATTCAATATCGGGGTTTTGATTAGATGTTTTAGGTTGAAGTCTTATAATTTTTTGTGTGTAAAAAGCACTCATAAAGTGTTGAACAAAATAAGAAGATAAATGGCTTTAAAGCTCAAATTTTATGAGAGCTTATACAAATTTAACATTCATAAATAACTTAATTTTGTTCTATTTCTTTTTTAATTCAATAGCGTGTTGGTTTAAGCCTTAAGTGTATTCTTTTACGTGAAAGTTAGAATACTTATTTGCAAGGTTGTTAAGTGCCCATTGAGCTGTAGGACTATGACGAATAAATATGAAATTATTTGAGACTATTTCTCTGAAATTCCCAGAGATAAACGATGTAAATTGCAAAATTCACTTGGCTGTATGGAACGGAAAAGATAATCCACTTGATATTTTCTTAGCTGGAAATTTTGAAGAATGGCAACGCTGGCAATCTAAGCGTAACTTCGAAAGAGAGTTCATTGTTTCACTGATTCAAC # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCACCCTCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCACCAGCGGGGATAAACCG with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-8.50,-8.70] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-31] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //