Array 1 1073613-1075795 **** Predicted by CRISPRDetect 2.4 *** >NZ_UFWS01000001.1 Clostridium perfringens strain NCTC8247, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 1073613 29 100.0 36 ............................. GTTAAAAAAACCTCTTGATTTATAAATTTCATATAA 1073678 29 100.0 36 ............................. GCTAAACCAGCTTTTTTAAAATCTATATCAAAATGA 1073743 29 100.0 37 ............................. ACGGCAATGCACCAACATCAGCACCAGAAACAACTTT 1073809 29 100.0 36 ............................. AACCAATCTTGAGGAATTATAACTTTAGCATTATAA 1073874 29 100.0 35 ............................. TTACCATTAAATTTACCGTTTAACTCTCCCTCCAA 1073938 29 100.0 37 ............................. TTATAGAAAAAGTATAAACAAATTTAGGCTCTATAGA 1074004 29 100.0 36 ............................. TTCATTATAAAGATAGAAGAAAACTATCTATTTATT 1074069 29 100.0 36 ............................. ACCATAATTATAAGACTTACAAGACCTCTCTAACTC 1074134 29 100.0 37 ............................. TTGGTAATATCCCACGGAATACAAAATGGAAAAGCTT 1074200 29 100.0 37 ............................. TTTAATTGTAGATGCAATCATATCATTTTTATCCATC 1074266 29 100.0 36 ............................. TACTATCATGAAGGTAGAAAAGTTCTTGATGAACAA 1074331 29 100.0 37 ............................. AAGTACAAAAACATCTTAGATTATAAGCTAGGGGACA 1074397 29 100.0 36 ............................. ATATAATAAAGGCAAGTAAATAAAAGATACTTCTTT 1074462 29 100.0 36 ............................. TGCATGCTAGGGTTACTATGGATTATATTTATTTAA 1074527 29 100.0 36 ............................. GTTTATTCAATTTAACTTTACTATTATAACTACCTA 1074592 29 100.0 36 ............................. TTATGATTCTGCAATTCGAGAGCTTTTTGAGTACAA 1074657 29 100.0 35 ............................. TTGAATTTACCATCAAGTTCTCCTTCTAAAGCCTT 1074721 29 100.0 36 ............................. TTTTCTTAACATCAAATACCTTATTTTCATCACCTT 1074786 29 100.0 36 ............................. TTTAAAGGCTACGCTTCGCTATGTCTGCGACGCCAC 1074851 29 100.0 36 ............................. CCATTACAACCAATAACAGTCACAACACAATAAGTA 1074916 29 100.0 37 ............................. ATACAAACTATAAAAAAATAGCTAAGATTATTATTAT 1074982 29 100.0 36 ............................. AGCAAGTAAACTTGCTATATGATGTTTTTTATCTTC 1075047 29 100.0 36 ............................. TATCATACATAATATTACCGTCATTATCCAAGTTAC 1075112 29 100.0 36 ............................. ACTGTTGAATCAGGAATTTTAGACAATGCTTCTAAA 1075177 29 100.0 37 ............................. CTCATATCAGTTGGGTAGGATGGGAATCTATTACAAA 1075243 29 100.0 37 ............................. TCAGAATTTTTATTAATTTCACCTGAACTTTCTTCTA 1075309 29 100.0 37 ............................. GTTATTATTTCAACTTTTCTTTTTATCTCTTCATCCC 1075375 29 100.0 37 ............................. AGAAAGAAATCATTGACCCTATAGGGAAAAGCCAATT 1075441 29 100.0 35 ............................. TTATTCCCTAAAGCGTTCTTATTCCCTTTAGGAGC 1075505 29 100.0 35 ............................. TTATGTAACTAAGATTACAACTTTTATGAAATGGT 1075569 29 100.0 37 ............................. TTTATAATGCTCTCGTTGATCATCTGTTAGTTCAAAC 1075635 29 100.0 36 ............................. TTTTGATTTAACTCTACAAGCTTTAAGCAACTCTCT 1075700 29 100.0 37 ............................. TTGCTTTTTAAGACACATTCTAAATATGTGCCTTCAT 1075766 29 86.2 0 .................GAA....C.... | T [1075793] ========== ====== ====== ====== ============================= ===================================== ================== 34 29 99.6 36 GTTTTATATTAACTATGAGGAATGTAAAT # Left flank : AACTTAGAAATATAATATCTTTTGATATAATACCTCAATGTATTTATGAGAAAAATGAATCAGAAATTGAAAGCTTACTTGAAATTATAAATGATGAAAAAACAGATAAAATAAATAGAATAAAATCCATAGATAAAATAAAAAGTTTTACAGTATCAGTTGGGCAATATGATATTGAACTTTTAAAAAATAAACTTATTATGGAGTTAGAAGTAGGAAAGTATGAAAGAATTCCAGTATATAAATGCAATTATTCAGAGTTAGGATTTACTAGAAACACTAAAGAAGATGTATATGATAATTTCATATAAAACTAATTTTGCAGTAGATCTATTTTCTTATAATACTAGCTGTAACCAAGTAATATCAATGGTTAGAAGGAGATTTTTATTGATACACTAAAACATTACTGATGGTCTACTGCAAAATTTTAATATTTATGATAAAATTAACAATAGAGAATGAGTCTATTACTAGCTTTTAGCATTTTGAAATTTGGG # Right flank : TATATATAAAGCATCTTCAAACTTAAAATCATACTTTTAAACTTATAATTTTTTGTTTCAATAGCAAGTGAACCTAATAAAGATATATTTCCAACAATGTTTTGGCTTGCTTTATATACAACATTGCCATTTCAAAGTGTAATAAATCTTTTAGTAGGCTATAACATAGAGAGTTTGTAATACTTAATACTTCCAATATATATGATAACATTAAGCTTATTAAGTTATAAGGTACTTAAATTTAAACCTCAAAAAAATAAACAAGATAAGTAATTTTAGTTTTATAATAAGAATTAAAAAGTAAAATGGACATGATATCTGTCCATTTTTACTTAATTATTGATATATACTTATTAAATTTAGAACTTTGAATCTAATAATCTATGCATTTAGCAGTTTACATTTAATAGCTCCCTTGAAATTTCCTCAAATCTTTCATCAGATATACCAAGTTTTTTCTTAAATATATCATCATCAATTCTAGCAACAATAACCTCATT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTATGAGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: F [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [73.3-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.27 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //