Array 1 33589-33177 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAXPU010000004.1 Vagococcus lutrae strain DS2263-02 226302_4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 33588 30 100.0 35 .............................. AAACTTTTTGAGTTTCCAGAATGTTTGAAATCTTG 33523 30 100.0 36 .............................. CTTGACGCTGCTAAATTACGTATGGACGCTAATAAA 33457 30 100.0 36 .............................. GTTAGGAATGCTGATTCTAACGCTACTGCGAACGCT 33391 30 100.0 36 .............................. CCTATGCACCCTAATTGTAGATGTTCGACCTATCCA 33325 30 100.0 35 .............................. TTTTCATATCTAAATATAGTAGAACGAGATACACC 33260 30 100.0 23 .............................. CTTTTATATAGCATATATAGGCA Deletion [33208] 33207 30 83.3 0 .................A.......ATTT. | T [33196] ========== ====== ====== ====== ============================== ==================================== ================== 7 30 97.6 34 GTATTTAATCTAAAATAGTGGAATGTAAAT # Left flank : AGCCAATCGTCCTCATGCTGAGAAATTGATTGCGACACTGAAACGTCGTCATCATAAAGAGTTATCGGCCACTGAAAAGAAAAAGCTAACAAAAGAAAAGCGTCAAGCACGACTAATGCTGGAACAGTATCAAGTAGATATACCTGCATATCTTTTTCAAAAAGGAGAGTGGATAGGGATAGAAATCACTCCTTATGAAACCTTGTTACTCTTTGAATGTGAGTATGATGCTGAAAAAGGACTTTACCTGATAATTGATGACACTTAGTAATAAAATAGGAAGTAAAAATAATTTAGATATGCACAAAAATCTGTCGATAGCTAAAACTTAATTTTTATAGGAAGATCGACAGAAATTATGATAAACTAGTCGTATCAAGAGTTTATATCAAGTAAGATAAAATTACTCAAGATCAAAAAAAAGAAACCTAAAAAAATTTACGGTGACCAACAGAAATGGTGTTTTCAGACCTGATATGTCAAGCCTTTTATGAGTCGCT # Right flank : ACCAAGTTGTTAAATACAGCTGAAAAAATAGGCTATCTACTTCTGAATTATCAGAAAAGATAGCCTATTTTTTTCATCAAGACACATTTCTTTGAAAACATCCTACAAAACGATTAATTCGTTTCAGCGTTTTCCTTTTGTAAGTCCTCTATTTCAATAACGCCATAGTTTTTACGTTCAAGTTGCTCGACAATCGTGTCAAGCGTTTCTTGAGTAGTATCGATAGGTAGCGTAAAGAGTGTTCGACGGATAAATTCATCTTGTCCGACATCAAGCGTGATACAGCTTGCGATATTGGAATATTTAGAGATGATTTTAGAAATAGCCGCTAAGTCACCACGGTTTCCAGTAGAAGCGACTGTTAACACATAGCGTCCTTCATTCACATTCCATGATTGAGCCAAAATGTTTAATAACTTACTATGGGTCAAAATTCCGTAAAATTGTTGTTTGTCATCCAATACAGCGATGTATGGAAGTTCTTTAATCGTAAAGAATAT # Questionable array : NO Score: 3.04 # Score Detail : 1:0, 2:0, 3:0, 4:0.88, 5:0, 6:0.25, 7:-0.09, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTTAATCTAAAATAGTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.70] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA //