Array 1 1347744-1348828 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP020559.1 Clostridium formicaceticum strain DSM 92 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 1347744 30 100.0 35 .............................. GAAGAACAAAACCTTTTCTTTCTAGTTCTTCCCAT 1347809 30 100.0 35 .............................. TAATAAAAAATCTCCAATATAGAAAAATCCAATAT 1347874 30 100.0 36 .............................. GATGGCACACGCCACTGACGAAATTAAGGATATGTA 1347940 30 100.0 36 .............................. TGATTTAGCCACCTGTATAAAGTGCTTAAAGGAATA 1348006 30 100.0 36 .............................. TATAATCTTCTAGCATTTCTAAGATTTCATCAAAAT 1348072 30 100.0 37 .............................. ATATAGGATTGACTAGCTACAATTACAAGGAAGCAGG 1348139 30 100.0 38 .............................. AACTAAAAGAAAATTTTATTACTATTCCCACGATCAAA 1348207 30 100.0 36 .............................. TAATCAAGTTGCAGCATAACAGATCCACAGCTGCTG 1348273 30 100.0 35 .............................. AGAGGAATTGGGGAAAAAAGTTGGTGTATCTAGGC 1348338 30 100.0 36 .............................. CCATATTTTTTTCTGTAAAAAAACATTTCTGAATCA 1348404 30 100.0 36 .............................. TGCAATTTTTTCATTTTAAAACTCCTCCTTTTCATA 1348470 30 100.0 36 .............................. TGCAATTTTTTCATTTTAAAACTCCTCCTTTTCATA 1348536 30 100.0 36 .............................. ATACTTTTGGTACAATTTTATACCAAATTACATTAC 1348602 30 100.0 36 .............................. CAATTTTAATGATTATGTTAATGTTAACTTTAACTT 1348668 30 100.0 36 .............................. CAGTTTCTTCACGAAGAAGGCTTTAAGCATCATGCA 1348734 30 93.3 34 ...A............A............. ATCCTTGTTTTTCTAGAACTTCTAATGAAATTTG 1348798 30 90.0 0 ................A.........TT.. | A [1348823] ========== ====== ====== ====== ============================== ====================================== ================== 17 30 99.0 36 ATTGAACCTCAACATAGGATGTATTTAAAT # Left flank : TGTAAATGAAAAAAAATTATAATTACAATTATGCTTTTCTTTTTTATGATGTCAATGTTAAGCGAGTCAATAAAGTATTTAAAGTATGTAAAAAATATTTATCTCACTTTCAAAAATCTGTTTTCAGAGGGGATATAACACCATCGAAGTTGATGTTATTGAAAGAGGAACTGAATAGAGTAATAGATGAATCTGAGGATTTTGTATGTATCATAAAGTTGATGAATAACAATGTATATGGAGAAGAAATATTAGGCAACAAGCAAAATGATACAGGGGAAGATCTCATATTATAAGAAATTTCAAAAAAATGGTATTTGTACTTTTACCAGGCAACATTTTTATTTCATAGCATTTAATTCACTGTTTTAAATCGTTATAGATGTATTTGTATAAAATTCATATTCTTAATAAATTGACTTGGTAAAAAATTTATTATACTATTGATTTAGCTTGATTATGACGAAAAATCAAAAGATTGGAATGAGTTGCTTGCAATG # Right flank : TGATAATAGAAATTTTACATTCTTTTTAGTATTAGTTGAAAGGCATAATTTTCCTCACTATGTAAAACACGAATAGTGGATTTTAGGGTTTTAAATTAATTTTATAATCTGATACAATAGAAAAGTATATAATATAATTATCGGAAATAAGCAAATAAAAAGATGCTTCAAGAGGTGAAGACAAATGAACGAAAAAAGCTTAAGAGTATTAGAATATACAAAAATCATTGAAAAATTGGTTGAGGGGTGTACATCCTCATTGGGTAAGGATTTAGTAAAAAACTTAAAACCCTTCAATCAACTTGAAAAAATACAACAACTACAGAAGGAGACCAGCGAGGCTCAAAGTATATTGATAAAAAGAGGAAATGTTCCACTTGGGGGTATCCATGATATTCTTCATCTTGTTCGTAGAACAGAGATTGGTTCTTATCTGGACCCAGGGCAGCTTTTATATCTAAGAGATACATTAGCTGTTGCTCGAAAACTAAAGCAATTTT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGAACCTCAACATAGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.10,-1.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 2 2532611-2530794 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP020559.1 Clostridium formicaceticum strain DSM 92 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 2532610 30 100.0 36 .............................. CCTTTTTAAAAGGCATAAAAAAACACCCTTCTAAAA 2532544 30 100.0 37 .............................. TTTTAAAACCCTGCTGTCTAAAATACTGTATTGTCTT 2532477 30 100.0 38 .............................. AACAATAGCAACACCCAAAATATCAAACGAAAAAGTTG 2532409 30 100.0 37 .............................. CCTTATATTATTGTAGAGGGTTCAGTTCACAAAGCTA 2532342 30 100.0 36 .............................. TTATTAGACAGATATTCAAAAGGGGGATGAATATGG 2532276 30 100.0 36 .............................. CATAAGGCTTCACACAAAGCCCCTGATGTTGCCCTA 2532210 30 100.0 37 .............................. TTAATAGAAGCAGCTGGAACACTTAACGTAACAGAAG 2532143 30 100.0 35 .............................. TCTTAATAATCTCCGTTGCGGTTTCTACTGGCACA 2532078 30 100.0 36 .............................. ACAATTGTTTGTAGATTTTGAAGATGCTCATGCGGC 2532012 30 100.0 37 .............................. AACCCAAAAACAGTGAAACAAATACTTGATTGGCTTC 2531945 30 100.0 35 .............................. ACAGGAAAAGAATAATCTTCTTTTGCAAGATCTGC 2531880 30 100.0 35 .............................. TTTGGATCATCTCTACCACCCTTTCGGACTATAGT 2531815 30 100.0 37 .............................. ATTGTTACATATTGCAGGCAAAGCCTGCAAAAATACA 2531748 30 100.0 36 .............................. TTAAACATGATTATAGTTCACTTGCGTTTGAAAATT 2531682 30 100.0 37 .............................. TTGGTTAAAGAAATAAAAAAAGAGTGCAAAAGGTAAA 2531615 30 100.0 37 .............................. GCTTGTATATTGGTCTTTGCGTTAATAGCTGCTAATC 2531548 30 100.0 36 .............................. TGATAAAAAAGCAGAGTGTTTTACAAGGGGTATAGC 2531482 30 100.0 37 .............................. AGAACTATTAACATTGTGAAACCTGAAGTGATTTTAA 2531415 30 100.0 38 .............................. AGAACAGATTCAAGATACCTTTCAGAAGATATGATCTC 2531347 30 100.0 35 .............................. TCAGGAAATTCTTCCCTATATTGATAATCTGTATC 2531282 30 100.0 35 .............................. ACTTGTCCCTCGATACAATAAAATAAGGGAGGAAT 2531217 30 100.0 36 .............................. AAGGTAGCCAAAATTATAGCAGCATATCTAAAGTTA 2531151 30 100.0 37 .............................. AGATGGAAGGTGCTTATTGTGCTGAGACAGCATATTT 2531084 30 100.0 35 .............................. GTATCACGAACATAAATATTATAACCTTCTATCAT 2531019 30 100.0 35 .............................. AGATGTATTATAAGCAGTGCTACTTCATCTATCGC 2530954 30 96.7 35 ..G........................... CCAATAAGTAAATCTATTTCAGTTTTGACATATCC 2530889 30 100.0 36 .............................. ATGAGAAAAAAGAAGCAGTAAGGACCATAAGGCGGG 2530823 30 96.7 0 ..G........................... | ========== ====== ====== ====== ============================== ====================================== ================== 28 30 99.8 36 CCTTTAATAGAACTACAGTAGAATGTAAAT # Left flank : AGAAATATAGTGGATTTAAAATTTGGTGGTGATGCTATGTATGTAGTTTTAATGTATGATATAATGATGGATAAAGATGGTGCTAAAGTGCAGAGAAATACCTTTAAAATATGCAAGAGATATTTAACCCATATACAAAAATCTGTATTTGAGGGGAATTTAACAGAATTAAATTTAATGAAGTTAAAAAAAGAATTAGGTCAGTATATAAGGGATCATAAAGATTCTCTGGTAATATTTAAGAGTAGGGATGAAAAATGGCTAGCTAAGGAGTTCTTAGGGTTAAAAGATGATAAGACATCTAATTTTTTTTAGATAACAATCTGTCGATCTCTAGTAATGTAAAAACAGACGGTATCGACAAAGTCAATTTATATCTTATGTAAAAAGTATTTTTTAGAAAAAAGATGTACTCAATATAACTTTAAATGACTTTTAAACCACACTTGGACAGAAAGTAAGTGTACAAGCCAGTAGTATAAATGCTTTAAAATGAGCGA # Right flank : AAAAAAGTAGAAAAAGAGAAATACACAGGGCAAGATCCTTTAACAAATAGAAATACAACCGTAGAAAAATAAAAACAAACATACTAAAGATAGCACAGTAAAGTATAGGAAAAATGTGTTGAAGACAATAATTAGCGTAATTATAGGATATATATTTTAAAATATAAACTACATTTGCATCTAGGCTTAAGTATAGGGTACAATTGAAGGGTTAAGAATTATCTAAGAAAAGATGAAAATAGAATGAGACTTAATTCAGGGGGAGTTTTTACTCTTACTGAATTGTAGTCGAATTTATTTCGGGGATGTAGTGTTTGACCTCCCACTTAGATAAGTAGATAACCCAAATCTTTGATCTGGTGTTAGTCACTTAGTTTGTTCACCTAGAAGTGGGAGTCTTAGCAATACAGCGAAGAATAAATTAAGAGAAGATAAGAAATAAAAACTCATCTAAAGATGAGGAGGCGTAAATGATGAACAAAACTGCTATTAAAAGCTTT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTTTAATAGAACTACAGTAGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //