Array 1 15794-15646 **** Predicted by CRISPRDetect 2.4 *** >NZ_PGGB02000001.1 Caedibacter taeniospiralis strain 51K CDBSP_s01, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 15793 28 100.0 32 ............................ AGATTGCGGAAGCCCCACATATGAAGGTTGTT 15733 28 100.0 32 ............................ TTGCTATTTTTTTAGCAGCTATATCTTCTTTA 15673 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 3 28 100.0 32 GTCCACTGCCGTACAGGCAGCTTAGAAA # Left flank : ATGCGAAGTCTGTTCCAGTGGTTAAAAAACACAGAGACTCACCCATTGATTAAACTTAGCACAGACAAAGCGGATTCAGCGCCATTTATTGAATTTATGTTACATCGTGTGATGGAGTCACTGACACGTGTCACCCCTCAAGTCAAAAAATTATTGGAGGTTGCACAAGAGGAAATGGCAGCATTAGAAATTCAAGGTAAATTAAATTTAAAAGATCGAAAATCGTTTCGTTTACATTATCTTGACCCTGCCATGAGAGCAGGCGTAATTGAGATGACGATTCCAGAACGACCAAACAGTCGTTTACAAAAATATCGTTTGACAGAGCTAGGACGCATGGTGACACAAAAATAACGATTGAGGCTGAACCCTTTTTTTGGGGGGCTGCTGGAAGTTCTTTAAAAATCAAGCCTTTAGAGTATGACTAAAAAATAAGGGTTTTTATTGGCAACGCGTCAGCAACCCTTTATTTTATCTGCGCTTTAATCTAAAATTTTGCA # Right flank : AATAATGAAATTAATAAGATAAATATTGAAGCGTTCACTGCCGCACAGGGCGAAAACGGTTAAGTTAATTTGCTACGAAGTAGCGCACGGATGAGCGCTATTTGCTACGGACTTGCAAATGGCTGCTTACGCTTTGAGGCAGGATGGTCGAAAAGAGAAAGGCTTAGAAAAAAGCATATCTAAACCGTCACCAGACGATTTAACGATGACTATTAAATGACCTCATACTCCTTGCATTTGTACGCTTCAAAATTAAGCTCCCATTTCCCAAATATTGGAATCCATGATTTTTTGATATATGCGTTCCCACCTAACTCATAAACCTTGTTTCTCATTTTAATATTTCCAGTTCCTCTGGCTGAAAAGGGGCTTTCATAAACTGTCTCGTAACCTAGAAATTTACATTCATTTTGCCAATCAATATTTATTTCTCTAACTAGCCTTCCACCTTTTGTTAGTTCTGTCGTAGCACAGCTTGACAGAAAAAATATTATGGCAAA # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [63.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.24 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 16856-16492 **** Predicted by CRISPRDetect 2.4 *** >NZ_PGGB02000001.1 Caedibacter taeniospiralis strain 51K CDBSP_s01, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 16855 32 100.0 34 ................................ AAACATTGTGTTATCATTATCCACTTCGCATGAC 16789 32 100.0 36 ................................ AAACATTGTGTTATCATATTCAAAGGCAAAGCTTAG 16721 32 100.0 34 ................................ ATCAATCACCCGTTGCAAAAATACCTGCTATCAC 16655 32 100.0 34 ................................ CGTCATACCGTATGCAATCAGATTTAGGATGTTC 16589 32 93.8 34 ..............................AC ACGCAGCATCCTAAGCTGGGATTTACTATTTTGG 16523 32 84.4 0 ............A.T.....A.........AC | ========== ====== ====== ====== ================================ ==================================== ================== 6 32 96.4 35 GTCGCACCCCGTGTGGGTGCGTGGATTGAAGG # Left flank : ATGATGTATCACTGAAGGAAGAAACTGGCGTTCGGCGTTTAAGAAAAATTGCAGAGACCTGTCAGGATTATGGGGTTAGGGTGCAAAACTCAGTATTTGAATGTGACATAAGCCCCGATCAATGGTGTGTGTTGAAAATGAAACTTTTGGATAGTTATGATCCAGAAATGGATAGCCTGCGTTTTTACAAATTGGGCAAAAATGGTCGCAATAAAATAGAACACTATGGCGCTAAGGCAGTTGCAGATGTGTTTAAGTCGGTGCTGTTGTTATAAATTTCCCCGTGAATTCTGCAAGCTCGATGTTTAACAGTTCAAAAGTATAACTACTTGTGCGCTAACCACTTGTCCTCATTACTTGCCAATGGGGTTGGCGGGTATATTTCTACTTGTGTTTATGTGTCAATATGATATTTTGTCACCTGCATAGATGCAATGGAAGCGTAGGTTAGCGAATTTACGTACAGAACGTATGTAAAATCAAGTACCATTTTCTATGCT # Right flank : ATTGCCTCGGATATTGCCGTGTATGATCGCCTGCAAAACTGGAATTCTGAAAAAGATAAGGACCTTTTACAGACTCATGGCATGTTGATGTCAGGTTTGATCGATAATCCAGGGCGCTATCGCCATCACAGCGTTGGCGTGATGTCAGGAAAGAGAGTTGTGCATATGGCACCTTCGGCAAAACGAGTTCCAGTATTGATGCGAAGTCTGTTCCAGTGGTTAAAAAACACAGAGACTCACCCATTGATTAAACTTAGCACAGACAAAGCGGATTCAGCGCCATTTATTGAATTTATGTTACATCGTGTGATGGAGTCACTGACACGTGTCACCCCTCAAGTCAAAAAATTATTGGAGGTTGCACAAGAGGAAATGGCAGCATTAGAAATTCAAGGTAAATTAAATTTAAAAGATCGAAAATCGTTTCGTTTACATTATCTTGACCCTGCCATGAGAGCAGGCGTAATTGAGATGACGATTCCAGAACGACCAAACAGTCG # Questionable array : NO Score: 6.08 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCCGTGTGGGTGCGTGGATTGAAGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCATCCCGTGTGGATGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.60,-4.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,4.91 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //