Array 1 636618-637583 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP053229.1 Enterocloster bolteae strain CBBP-2 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 636618 33 100.0 34 ................................. TTGTTTTGGTTGGAACTGTTGTGTATATAGCTTC 636685 33 100.0 33 ................................. CCATCCATCCGGGATATGGAATGGATTTATTAC 636751 33 100.0 33 ................................. TTACCGCCTTATCCTCTTCCGGCTCTCCCTCCG 636817 33 100.0 34 ................................. TAATGTATCCCCTATCATGGAGAAAAGCGAAAAA 636884 33 100.0 35 ................................. AAATGCAGTAAGGTTATTGTCAATATCCTCTATAC 636952 33 100.0 34 ................................. GGGTGTGAAATAGTCAATCGGCTTTTTGGTAACC 637019 33 100.0 35 ................................. TGATTTTGTTATACTGTTGACTGCCTGGACCATTG 637087 33 100.0 33 ................................. ATACTCTGCTGTGTGGGCAGCCATGACTGCACG 637153 33 100.0 33 ................................. GGATGTATCTCACATTTAAGGGAGGATAGTTAT 637219 33 100.0 34 ................................. GACTATCTGGCAATCCCAACAGTGGAAACGGACG 637286 33 100.0 33 ................................. TTCTTAAATTCCTTGGCCATCCCTTCCATAAAC 637352 33 100.0 34 ................................. TCATCTGAGATATCACAAATAGTTGTAGACCGGC 637419 33 100.0 33 ................................. AATTTACTATCCTCCTATACAGACACACGCACC 637485 33 97.0 33 .........A....................... TTATGACAACTTTGGAAGCCCATTGAACCACAC 637551 33 81.8 0 ......................CA..CCA...G | ========== ====== ====== ====== ================================= =================================== ================== 15 33 98.6 34 GTCGAGGCTCGCGAGAGCCTTGTGGATTGAAAT # Left flank : AAGTTCTGGAACTACCTGAAAAATGTGGATTTCTGGCAGTGGCCGGAACAGCGGTGGCCCTGAAGGCGGGAAAGCTGGCTGCTGTAATGGAACGCCAGGGCAGAGTACTGCGTATTTACAATGCAGAAGATATGAAGGAAGTGATGGCGGAATTTGTCCGTGCGTTCAAGCAGGGTGCCATATATCCGGAACAAAAGAGGCTTGTATTGAAAGAGTATCCGGCGGAGGCGGCAGAGGCTTTGCAGCATGCAGGATATATGCGGGAAATGAAGGATTATGTAATATATAAGTAGAGTTGGTTTCTGTGAGTTGGGAGCCCTTCAAACCAGGTGCGAATGCCAAGCTGACATGAAATGCCTGGGAGATTCGCACCTGAAAAACAGAGGAAAAGGCTGTGAAAGCGGGCTGGGTGAATGGACTGAATTGGTTGAACTGGGGAGAGAAGAGCATAATGCATAAAATGTTAGGGGGGATGTGGAGCAGGTTTGGATAATTTTGCT # Right flank : GATACCTGTAAGCCCCTAAATTGATGCAAAAGGAAAATTGCTCCCCACGTACCTAATGCATTGAAAGCAGCCATAATTATATATTGAGAATTCGCAAAACATCAGTTAAAAGAACATATTAACAGTATCCCGGTCAACAGGGAATCCGTTAAGCGCATACCACCCCCCCCAGCAAATAACATCCGCCCCAAAAAACACCAACATAAACAAAGGAGTAACACATATATGATTGAAATAATCTATAAAGACAAACGCTTTCTTGTTAAGGGCAGCTTTTCCATAGGAATAGCAGGAAACTATGTAAATGAGGATTTTGGGGACGAGAATATCATGATTAACGATACGTTAGAGGAAATCATGAAAGAATTGAAGGATGAGGACTCCTTTTGGTACAAGCCGCTGTTTCCCTATCTTAAATCTGAGACAGCAGACAGTGGCGGAATAGCCAGAGGTCTTACCGCGTACTACAATCAAAAGGAAAAAGAAATCAGGGAGAATGA # Questionable array : NO Score: 9.19 # Score Detail : 1:0, 2:3, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAGGCTCGCGAGAGCCTTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGAGGCTCGCGAGAGCCTTGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.90,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 3101973-3102184 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP053229.1 Enterocloster bolteae strain CBBP-2 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ============================ ================== 3101973 32 100.0 26 ................................ GGTCTAAGTAATACCACTGGCCTCCC 3102031 32 96.9 28 ...............................C CGTCCAGATAATACCATCTTCCATTAAT CT [3102036] 3102093 32 84.4 28 G....................CT.A......C CGTTCATATAATACCATTTGCCGTTGAT 3102153 32 75.0 0 G...............AT...AATA...T... | ========== ====== ====== ====== ================================ ============================ ================== 4 32 89.1 28 AGCCTGCCAGCCGGTCTGCATGGCGCCGCTGG # Left flank : CAGACAATCGCTTTCCCAAGGCCAGACGCGTCCCGCGCACCTTGATGATAACGCTTCCGCTGCCTTTCTTATTCAATATATTCACAGGCGTCCCCTCATTGACCCCCAGGGCCTCAAGACGTCTGGTAATGCTCTCATCCACCTGCACGCCCGTTACAACATACCGGCCGCCGATCTCACACTCGTTCAGCTTTTTCTGCATTGATGCCTGTCTCCTTTTGTAGTTACATTTAAACCATATTCATTGTATGCTTAATGCGAAAAAATGTCAATAAAAAGAGTTTGTTATGACAAACTCAATTCAAAAAAAGATACAGCGAATCTCTCCGCTGCATCTTTTCCTGATTTTTCTATATTTTTCTGTATTTTCCGGTTCTGTATATTCGTATTATGTTTTACTGCACCCAGGCTCCGGAACCATCCACATATTTTCCATCCGGCGTCCATGTATTATAATACATGGCTCCATTGGTGCCCAGATAGTAGTACTTGCCGTTGAT # Right flank : GAAGGATTCAGATAATACCAGGTTCCGTCCAGCTTCTGCCAGCCGGTAACGATATACCCCTTGTTGTTGAAATAATACCATGCACCGTTAATCTGTTTCCAGCAGGAGGCCGGATATCCGCCGGTGTCATACGCATACCATACACCTGTACCGTCCTGCTCCCAATGTCCGCTTCCGCCATAGCGGCCAAGCTCATCCTCATCAATATACAGGGAGCTGGAATCCTCGGACCATTCTCCTGTCTTATTATTGTAACGGGAAATAGCCCTTACACGGAAGGTATAGTCTCCCTCCCTGTTAAAATAACCTGCAAAGTTATATGAGGTTCCTGTAGTGCTGACCGTAGTGACCGTCTTATCGTCACGGAGCAGCTTTACATCGTAACTCTTAGCGCCCTCAATCTCTTCCCACTCAGCCGTGGTATCATTCCACTCCAGCTCCGACGCGCCCTGAAGCTTACCGCCGATACGTTTTAACTCAGCATACACTTCAATGTACTG # Questionable array : NO Score: 3.40 # Score Detail : 1:0, 2:3, 3:0, 4:0.45, 5:-1.5, 6:0.25, 7:-0.09, 8:0.6, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGCCTGCCAGCCGGTCTGCATGGCGCCGCTGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTGCCAGCCGGTGAGCATGGCGCCGGAGG with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.50,-3.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 4885896-4884588 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP053229.1 Enterocloster bolteae strain CBBP-2 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 4885895 33 100.0 34 ................................. CTTGGGATTGAGTGAGTGGTTGGCATGGCTGCCG 4885828 33 100.0 35 ................................. ATCTGAAGGGATAAAGAGGGATTTTAGCCCCTCTA 4885760 33 100.0 35 ................................. CGCTTGTTATACTTGAGTGACAATTTGACCATTAA 4885692 33 100.0 34 ................................. GACAAAACCGCCACGGCCATATGAAATATCAACA 4885625 33 100.0 33 ................................. TTACTCTCTGTAACATAAAAACACCTCCTAAAA 4885559 33 100.0 33 ................................. CGTAAGGGAACCATTCAATCGGTCGTTATCAGA 4885493 33 100.0 34 ................................. TTCTATACAGAGTTTTAATCGCGCCTCCAATTCA 4885426 33 100.0 34 ................................. ATCAAGAGAAAACAAACAGTATTCCGTGCTGGAA 4885359 33 100.0 36 ................................. ATTCCACTGCCTGTCAGCCATGGACTTATACATATC 4885290 33 100.0 34 ................................. CCTCTACCGGGATAGTGATAAGCTGCATAAAGCC 4885223 33 100.0 34 ................................. AACCATGATAGACGGTAAGAATGTAGAACATACA 4885156 33 100.0 34 ................................. AATTTTACATAATTGTTCATATAGACTCATACAG 4885089 33 100.0 33 ................................. CACATTTTCAGATGCAAACCGATTTAAAGATTG 4885023 33 100.0 33 ................................. TTTCTACGTCGTTAAAAAGGTGCGCATATGTTT 4884957 33 100.0 34 ................................. GTTTTGTTCCCTCTGCTGTGCAAGCAGCTGCTGG 4884890 33 100.0 34 ................................. AGGAGGAGTTTGGCCGGCTCTTGAATCTACTGGA 4884823 33 100.0 36 ................................. CCTGGACATTGGGAATGTGTTTAAGGTCTGGAAGTA 4884754 33 100.0 34 ................................. GACAGCTCCTCTCAGGCCCACCAGCGACATAGCC 4884687 33 100.0 34 ................................. ATTATGATGAGACATTTGTTGTTGATATGTCGGA 4884620 33 81.8 0 .............C...........A..TTCC. | ========== ====== ====== ====== ================================= ==================================== ================== 20 33 99.1 34 GTCTCCGTCCTCGTGGGCGGAGTGGGTTGAAAT # Left flank : TGCTGATACTGATTACATATGATGTGAATACGGAAACCGCTGCAGGCAGGACCAGGCTGAGAAAGGTTGCAAAGCAATGCGTTAATTACGGCACCCGCGTCCAGAATTCTGTATTTGAATGTATTTTGGATAATACCCAGCTGATAAAGCTAAAAGCCATACTGACAGATATCATTGATGAGCAGACGGACAGCCTTAGATTTTACAACCTGGGAAATAAACACACTACAAAGGTTGAACATGTTGGGGTGAGTAAAGGGATTAAAGTGGAAGAGCCGCTGATATTCTGATCTGGCTGCGGGTGGTAAGGAGGTTTCAAATAGTTTGGTGCGAACCAGAAGCAAACATGAATTTACGGGGGGATTCGCACCGGAAAAACTGCACAATGAGAACGGTTTTGGATGTGTGCAGGGTAGGTTGGCGGTGATTTGAGGGGGTATGATGTGATTTGATTGTGGAAATGTGATGAAGAATTGTTGGTTTTTTTGTGTAGTATTGCT # Right flank : TTCCGGTCAGTCTCCGCCCTCACAGCGAAGTAAGCTGAGAAGCCATCAAATTCAGGATTACGTTTAGTCAAAACATCATTCCCCTTTTTCTAAGAAAACAGTATAGTTTGAACCATAAACGTTAGCTATAACTAACAACACGCAGCAAAAAAGGTGGGCGAACACCCACCTTTGCCATAAACCTGTTATAGGGTATAAAGAATGCGGGCCTCCCTCACCCTTTCCATGCCCGAATCTCTCTAAGCCCCGGCACCAGCACCTTGGCGCTGGTTTCCAGAATGATCCGTCCTTTTTCAGCCGTGGCGCCTGACGGGTCTCCGCCGATTCCTATGGGTTTGCCGTCTGCTGTTTTCCAGTCCTCGGATACCCAGCCAATGGATACGTTTCCATAAGGCCTCAGTGCCTGATTGTCCTTAAATGCAGTCGGAATTCCTGCCTCTGAGGTATCTAACTTTACCAGAGACGGGTCCACAGCCATGACCATGGAGGTTTCCATCTCG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCGTCCTCGTGGGCGGAGTGGGTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCTCCGTCCTCGCGGGCGGAGTGGGTTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.70,-7.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //