Array 1 3026-4123 **** Predicted by CRISPRDetect 2.4 *** >NZ_QSQQ01000026.1 Dorea formicigenerans strain TF11-11 TF11-11.Scaf26, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 3026 36 100.0 30 .................................... AACGACCACGTGAAAACAGATATTCTTACA 3092 36 100.0 30 .................................... GGTGGCTATATGGGATAGCAATAGACCTTG 3158 36 100.0 30 .................................... AGACAGCCTTGGACGGATCCGCGAGGACTG 3224 36 100.0 31 .................................... AAGTCATTGTAAAAGGTTCATGGGCTTCTAT 3291 36 100.0 30 .................................... AGGGACAGGACCATCTGATATTATCCGGAG 3357 36 100.0 31 .................................... ATAATGGATCACCTGTAACTACAACCATAAA 3424 36 100.0 30 .................................... TAAAAATGTTGTTTAATGTAACCTTTTTCA 3490 36 100.0 30 .................................... AAGCGCAGAAGCAGGGAAGCTGGTTCAAAT 3556 36 100.0 30 .................................... ATGCCCCATGAATACGATCTGCCATGCTTC 3622 36 100.0 30 .................................... ATTTCTTCATGCCATTTGTAAAACTACAAC 3688 36 100.0 30 .................................... GTTTACATTATTGATGTTGATAATGTTTAG 3754 36 100.0 30 .................................... GCTGTCCGTGAATTTCTCTAGCTCAGCCAT 3820 36 100.0 30 .................................... GTACATGGGTTGACAGAAATAAGTATCTTG 3886 36 100.0 30 .................................... ATCTTCGGATATGCGAGCCACCCTGAGCCA 3952 36 100.0 30 .................................... CACCATTAGTTGCACTCGCTGTAGCAATAG 4018 36 97.2 30 ....................T............... GAATTTTTGATGATGAAGCGGAGTTGCTTG 4084 36 97.2 0 ....................A............... | ACGG [4103] ========== ====== ====== ====== ==================================== =============================== ================== 17 36 99.7 30 GTTTGAGAGTCTTGTTAATACGGAAGGAATTCAAAC # Left flank : AAAAAGGATTCTATCTCAGCTTTATAAAAATCTTTCAGAAAAAATATTGGAAGATCATTTTGAAGAATTTGCGACTGTGAATCAGAAGGTTATCCAGTTTATGGATAAGGTTACGAGTTCTTCCGAATATAATTTGACATATGATGTTGATTTTCAGGCAGCAGGTCTGATAAAATATTGTAATGTACATATGGATTCCTGTTATGATAATCTGACTGAAAAGTTTATAGACTATCTGAGAACCATGAAGCAGATCTGTAATGTTGATATTGTTTTTGTGTTGAATCTGAAGCAATATTTCAGTACCGAGGATCTGAGAGAAATCTATAAACACTGTTTTTATACGAAGATGTATCTGATTAATCTGGAAGGAGTAAAATCAGACTCCATCGAAAGTGACAGATATATTATTATAGATAAAGATCTTTGTGTGCTGGACCTTGTGTATTAACAACCTTCTATCGTAAGAAGATAACGACTCGGCGAGAACCGGATTTGAG # Right flank : CCACTTATTAAAGTGTGTATATATTTTCTCTGTGAGTGTCATAGCACTAGAGTGTCCCACAATCTTTTTGATAATCGTCTAATTAATACCAGTTCCCGCCAACATAGATATACATGTATGTCTGCAGCAATGTGGTGTACGATTAATATTAAGTTGTTCCATAAGTGGCTTGAAATAGCTATCATAGTAGTTTCGGTACTCAAAATGCTTTCAGTCTTCTGTGTGAAGTAAATATTCACATTCAGGGCAGGAATCATACCATGCCTTGTAGTATGGCAGAATCTTGTCAGCTATCTCAAGAAAATCAAAGTGATTTGACAGTGGCGACTTAGAATAACTTTGTGCGATTCTTAGAGGTTTCTGTAAAATAGCTGGATTATAAACAGATCTCATGAATGACCTTGACTTCCTGGTAAATGAATATGTAATATAAATGAATTTATCATAATCTAATTTATTATAAGGAGGCTTATTGAGAAATTCGTGGCATTTGCATATGA # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAGAGTCTTGTTAATACGGAAGGAATTCAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //