Array 1 86899-84428 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABAPW010000009.1 Arcanobacterium phocae strain APH122 NODE_9_length_102212_cov_83.485968, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 86898 29 100.0 32 ............................. GAAGAAGTATTCATCACTTCAATCAGCGCAGA 86837 29 100.0 32 ............................. GATCATTTCCACTAGCTCAAATGCGAATCTAC 86776 29 100.0 32 ............................. ACTGCTGATTCGGTAATCGGAGCCATGATTAC 86715 29 100.0 32 ............................. ACTTAGCTACTCCGGTTCCTGTAGGATCGCCT 86654 29 100.0 32 ............................. CTGACAGCAGACCCAGAGTTACGTTATGTAGG 86593 29 100.0 32 ............................. ATTCTGCAAGTGCCCTAGCGCGTTCGTTAGTT 86532 29 100.0 32 ............................. ATCATTGCGGGTGGAAGCCCGTGCCAAGATCT 86471 29 100.0 32 ............................. ACCTGTTGGAACTGTGGTCCCGGAGGGGACGC 86410 29 100.0 32 ............................. ATGAAAGACCTAGCCCGGCTTATCAACTATCA 86349 29 100.0 32 ............................. TTGTTACCAGGCGCCAAAGCATGATCAGCATC 86288 29 100.0 32 ............................. GAAAGGTCGAGTGCCGGTTTTTAAAACCAACC 86227 29 100.0 32 ............................. ATATCCCCGTCCTGAAATACCTGGCGCGGCTT 86166 29 100.0 32 ............................. TACATTCGGATCACTATAGATCTTCCGTTTTA 86105 29 100.0 32 ............................. ATAATTTCTTCTCACCGACCGCATGCCCCGGA 86044 29 100.0 32 ............................. TCGTCAGGGAATTATGGAGAAGCTACGCAAGG 85983 29 100.0 32 ............................. AATTCTCGGCTAAAGCTATGCACGGCGTTCTC 85922 29 96.6 32 ............................T CCGCGACCGTGTGGGTCCCAAAGCCATACGGG 85861 29 100.0 32 ............................. TAGAAGCGTGGAAATTCCGCCGGCAAGTGTGG 85800 29 100.0 32 ............................. CGTGCAAGATCCTCGCACACCGATTCCCGGGA 85739 29 100.0 32 ............................. GAATGGAAGTTCCATAGAGTGCCTTCGCCACT 85678 29 96.6 32 ............................T TATGCCGGCCGGCGTCGCCTTCTATCTAGCAG 85617 29 100.0 32 ............................. GCTGATCCCTACAGCGACGAAACACTCGCTTT 85556 29 100.0 32 ............................. TTCATCGTTGAGAGTTCCCCAACCAACTTGCG 85495 29 100.0 32 ............................. GTCGCCGCAAGATGCATTACGTGCAACAGCGA 85434 29 96.6 32 ............................A AATCGATTTTAACCGGCGGGATCACAAGACCG 85373 29 100.0 32 ............................. TCACGGATCAGCGTCGGAGCCTCATCTTGTAA 85312 29 100.0 32 ............................. TTCCAGTCGGGGTTAGCTAGGAATGATTCAAG 85251 29 100.0 32 ............................. AGGGAAGATGCAGACTGCGCAAGGCGCGCAAA 85190 29 100.0 32 ............................. TGAAGACCAGGCACGCACTTGGAAGAAGCAAG 85129 29 100.0 32 ............................. GTAGCGACGTGTGCGCAAGACGCAGTGAACCT 85068 29 96.6 34 ............................A CGGTTTGTCCTTTCGGCACGCTGATAGTGAATGG 85005 29 100.0 32 ............................. ATCGAAAATCTGGCTAGACTCCTTACCACCGG 84944 29 100.0 32 ............................. GAACTCTGGCATTTTATGTTCGTCTAATTGTG 84883 29 96.6 32 ..................A.......... ATCACAACCTTACAACTACCGGCAACTGACGG 84822 29 100.0 32 ............................. GATAGTCGCCACCCTGACATTGGGCAGCGAAA 84761 29 100.0 32 ............................. GCTAGCTAGGAGAGTTCCTTTCGTTAATGGTT 84700 29 100.0 32 ............................. AAAAAAGACCACCAAACGGTGGCCTCAGTCTT 84639 29 100.0 32 ............................. TTCGGCGACTACCCCGCCGAGGGATGGGCGCT 84578 29 100.0 32 ............................. ATCCGGCGCGTTTACGGCAATATTCCATTACG 84517 29 100.0 32 ............................. AAGGTGATTTTGAAACCGGCTGGAAAGCTTGT 84456 29 96.6 0 ........................C.... | ========== ====== ====== ====== ============================= ================================== ================== 41 29 99.5 32 CTCTTCCCCGCACACGCGGGGGTATTTCC # Left flank : TAGACGCGATTTACGGAGGCAAATTCATAGCAAGCATATATTGGAAGACATGCTTGGCACGCTCATGGAGATCTTAGAACCACACCTGCCGAATCGTGATGATGATCGATTGATCAATGATAATGGTGAAGTTTCTGGGCACGTACAATACGGAAAAGATGATGAGTGATGTTTGCAGTCTTAACAATATCTGCAGTTCCCGAGCATCTTCATGGCTATGTAACCCGATTTCTCACTGAGGTTGAAAGTGGGGTTTACGTCGGAAATATTTCTCGGAACGTGCGTGAACGCCTATGGGAACGTGTGAGTAGTACGCTTGACGAAGGAACTTCTACTATGATTTATAGCGACCCGCGACAAGAACAAGGATTCTCGATGCTCACTGCAGGAAAAAATTCACGAAAAGTATTGGACTTAGACGGTCTAACCGTTGTGTCCATGCGTCCTGGACGTGGAGAATCCAAAATTCGAGATCGTTGAAAATAAAGGGTTTCGTTAGT # Right flank : AAAATTTGAAGGCGATTCAAAGATGGGCGCTCAAGTGATCGGAACGATCATGATCAAGGTAGCGCTTCTTATTGTCGCTATTCAAAATGTAGATCTAATTCTTAAAGCTATTAACGAAGCTGGCGAAACACTTATTAACGGGCTGAAAAAGTATGCAACAGTCATACAGGCTAACCCTGTCAATATCGGTGATCTTGATATGGATACTCTAGATATGATCGGCGCAATGATCATTCTATTCTTGCCCTGGCTGATTTCAATGCTTGGCGGCATCGTCGTAAAAATCGTTGTACTCTTGCGATTTGCTGAGATATACATACTTTCTGCTGGGGCAACTCTACCGTTAGCATTCTTGGGTCATACCGACACAAAATAAATTTCGATCGGATACCTCAAGAAGTATGCAACGGCCATGCTTCACGGTTTCACGATCATCCTTGTCCTGATCATCTTTGCCAAATTCCAAGGAGCCGGTACAGACCTAGGAGAAAACCCAACAG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTTCCCCGCACACGCGGGGGTATTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA //