Array 1 11872-11015 **** Predicted by CRISPRDetect 2.4 *** >NZ_PCOH01000048.1 Bacillus sp. MYb56 MYb56_contig000048, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ====================================================================================== ================== 11871 28 100.0 36 ............................ TATTGATGTGTTTAACAATTCGAGTCACTTCTTTAT 11807 28 96.4 38 .............C.............. CAACCATTTTCAATGCCGATCTGTATGGTTACTGGTTA 11741 27 82.1 38 ........TG...-...C.....G.... TTCAAAAGTTACCCTAAAGTAATAAAAAAGTTAATTTA T [11726] 11675 28 78.6 37 ........TG...AAT.......T.... CATATTACGTATTAGCTTCAAATCAGCCGTTTTTCTA 11610 28 100.0 37 ............................ GTGAATCGTTGTATCGGTAAAAGCAATCAATGTATTT 11545 27 92.9 37 ........T....-.............. CGCCCATACATATGGATAACCATCGTAAGGTGATACG T [11530] 11480 28 85.7 37 T.......T..C..A............. GGTTGTTTCCGTATCGACTGAGATAATAGGTTCATCT 11415 28 100.0 37 ............................ CAACGTAATCGAAATAGATTGTATTGGTTATAAAAAT 11350 28 100.0 36 ............................ CACAAGATACATTGATCTTGTTAAAAAGCGTGGAAG 11286 28 92.9 37 .......TT................... GGTAATGATTAAGAAAGATATATTCGGTAGGTATAAT 11221 27 89.3 86 ........TG......-........... GTACCATAGCACTGTGAATGTCATTGTCGCGTTTATTGTTTTATCAGAACTATGTGGGACTAACCCGCTCTTGTAAGCAAGGAAGC A [11208] 11107 27 85.7 37 ........TG...-...C.......... GGTTACGCAAATCCAAGTGCCGATGATTTCAATTTCT C [11092] 11042 28 82.1 0 .A......T....CAT............ | ========== ====== ====== ====== ============================ ====================================================================================== ================== 13 28 91.2 41 GTTTTATCAAAACGTAGTGGGATATAAA # Left flank : CGGAAAACGTAAAATTCTTGATTTTCTTATTCGGTTTATTATCAAAGACATATAGGTTCTCTGCATACACTACGTTTGATTTTTTTAGAGCTTCTTTAATAAAACTCACAAACATAAAACGATACGAGAGAGGAATTACTTTGCAAGTAAAGCCTACTTTCAATCTCATCATTTCCCTCCTTAATCTTCTATATAGAATTATTATAATGTATTCAAAAATTAAAATTCAATAAATATGTAGAAATAAATGGAAAAACCTTTTTGTACGGAGAAAGACTTTTCTTTATCCCATATAGTAAAGATAAAAATCATATGGTACTTCCGTAATTTTGCAGTGAACCTCATTTTTTCCAAACATACGGAAAACCTTGTTATGACAAGGTCTTTCAGCATGTTTGAAGAGAAGACAAAAACATGATCGATGATTCACTGCAAAATACTGGTTGATACACAGGATAAAATGTTGCTATCATAAGGTGTATTATCCGTATATAGATAGG # Right flank : GAAACAAGAGCAAAAGCCACAATAAGGGTAAAACAAAAGGAACTTGTAGTAATCACTACAAGTTCCTTTTAAGATAATATTGATAAGACAAATTATTATTTTATTTTTTCTTCATACTGTTTAGCAAGCTTATAAAAAGAAGAACGTTTGATACCATACTTTTTCATGGCTCCTACTGCTGTAATTGAACCGGATTTCCATTCCTTGTAAGCATCCGTGAATTCTTCTGTTATTTCAACAGGTGGACGTCCTAAACGTTTACCCTGTTTTTTAGCAAGAGCAATTCCCTCAGCTTGACGTTGTTTAATATCAATGCGCTCTTTTTCTGCAAAGGCAGATAATATTGTCAGTGTTGCTTTTTGAATTGCGCTCTGAATAACATCATTTGTACTTTCTCCAGTGTAATTTACGTTAATGTATGGTTCCTTTATAAATTGTAAATTTACTTTATGTTTTTCGTAATATCTAAATTCTTCTAATGTATCATTCATATTTCTTCC # Questionable array : NO Score: 4.96 # Score Detail : 1:0, 2:3, 3:0, 4:0.56, 5:0, 6:0.25, 7:-0.34, 8:1, 9:0.49, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATCAAAACGTAGTGGGATATAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:71.43%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [16-16] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 2 19332-18589 **** Predicted by CRISPRDetect 2.4 *** >NZ_PCOH01000048.1 Bacillus sp. MYb56 MYb56_contig000048, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== ======================================= ================== 19331 27 81.5 39 ...........C.TAG..C........ CTTGAAGTTTGATAAGAAACAAAAGATGTTAATGCTGTT A [19310] 19264 26 96.3 38 ...................-....... AATACTACAATGATACGTCTAATCAGTTTACCTATGCG 19199 27 100.0 36 ........................... CAGGTGTTTTGCGACAAAGCTACAGTGTACCTCAAG 19135 27 100.0 36 ........................... TTAGCGCAAGGTATGTTCGGTGCAACAACTCAAATC 19071 27 88.9 36 .............TCG........... CCAATTCACCGAGCTGGTTCAGAAAGAGCTTTGATC 19007 27 92.6 38 .............A...C......... ATAACACAGTTGCTAAATACGCTGTATTCAATCAACAC G [18995] 18940 27 92.6 36 .........T.....G........... ATTTTAAGTATGATAAAAGGTGCTGTAAACAACATT 18876 27 88.9 37 .............T...C.......G. CCATAACCTTTTTGTATTGTTCGATACATCGGCATGC A [18862] 18810 27 92.6 37 ...............G..........T TGGTACCGAACTAAGCGTTCTTTACGAAGGAGGATAA 18745 27 92.6 37 .............T.G........... CCACATATACTGAAGAACTCGATCTGTAATTTTCTCC 18681 27 88.9 37 ....C......C.....C......... ATCGAAATAGGGTGGGCGTCTCCCTCCAAATACGTAA A [18667] 18616 27 88.9 0 .............T...C........T | T [18601] ========== ====== ====== ====== =========================== ======================================= ================== 12 27 92.0 37 TTTATATCCCATACGTTTAGATAAAAC # Left flank : AAAAGTTAATCATGTAACAGATATCAAATATACATAGCGCTTAAAAAATTATGGGGTGGGGAATTATGATGAAAAGTCAAAAAGAGCTTATCTATCATTTTAGAGAGTTTTGGGATTTTGAGTATATTTGTTTGGAGAAAAAAGGCTTGGGGTTCCCAGAATTAGAAGAAGTAATGTTGAAATATAACATGCATAAATCTGATGAGAATTTGGAATTTAAAGAGTGTTGGATACATCGTGAATTTGTGGATGGAGAAGAATTAAGAACAGTTCAAATTATATATGAAGATAGTAAAATTAATAGGGTTGTTCGTTTATGGGGATCTAAGAAAAATAAAGATGGAAAAGTTCTTGCAATAACAATGGACTTTTTAAATATAGAAACCAAAGAACTTGAATGTGAAATTGATCTAATGAAAGATAAAAAATTTGAAGGTATCAACCATAGAAATAGAGCCCTTTTTAATTAGGACTCTATTTCTATGGTTTCATTACAAACT # Right flank : CCTATCTGTATACAAGTGATAAACCTTATGATAGCAACGTCTTAACAGGTGTATCAATCAGTATTTTGCAGCGAATCCTCGATCATGTTTTTGTCTTCTCTTATAAAATGCTGAAAGACCTTGTCATATCAAGGTTTTCTACATGTTTTATAAAAACGAGGTTCACTGCAAAATTACGGAAGTACAATTCCTGTTCCTGTTATCTTTTCTTTATCAAAATCGTACTTGCAATTTATAGTGTGAATGTATTGAAGTCCGGGAATATCAATTTCCTTTATTTCGATTCCGTATCGTTGAACCTGTTTTCTAGAAATAGAGGTTGTAAGCTTTTCGATTTGCATTCGTAATACTTTTCGCTGTTTCGAATCTTTTTCCTGTTTAAATGTAGTAAATAGCTCACGATTCTCTACATATATAGACCAGGGAATAACTTGATAATTATCAATATCACGCAGCAACCTTTGTGCTTCTGTATTTCTCATATCGTTTAGTGGCAGTGT # Questionable array : NO Score: 5.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.60, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.29, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTTATATCCCATACGTTTAGATAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:74.07%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [12-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //