Array 1 443948-439777 **** Predicted by CRISPRDetect 2.4 *** >NZ_WHIV01000002.1 Duganella sp. FT27W NODE_2_length_1288030_cov_26.724728_2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 443947 29 100.0 32 ............................. GAGGAGCGCGAACAGGTGCGGCGCGCCCTCGT 443886 29 100.0 32 ............................. GTCACGCATAGCATCCAGCGCGAGTCCGCGAA 443825 29 100.0 32 ............................. CTCTCAAAGCAGGGCCGGCATCGCGGGATCAC 443764 29 100.0 32 ............................. GGCAGGGCGGGGCTATCTGATCAGGCGTGGCC 443703 29 100.0 32 ............................. CGCCGTGGCCTGGTGCTGCGCAACGTGCGCGG 443642 29 100.0 32 ............................. TGTGGCTGATGATCCCGGAAGAGGTCCGGCGC 443581 29 100.0 32 ............................. TATCACGCCGTGCTGGCGAAAAGCGGCACGCT 443520 29 100.0 32 ............................. GCGATCCACATCGACCTGAATGGCGGCCTGGT 443459 29 100.0 32 ............................. GAATCGCCATTGATCGCCGTGGTTCCGTGCTG 443398 29 100.0 32 ............................. CCTGTAGCAAACTCAATAAGCTTAAACCCTAC 443337 29 100.0 32 ............................. CTATGGGGCGCCACGCTGGTAGGCGATGGTCC 443276 29 100.0 32 ............................. ATAGCGAATTCACGAACACCCTGTTGACTGAA 443215 29 100.0 32 ............................. GGCGGCGGCCATATCCCTGCGCTGGAAGTCAC 443154 29 100.0 32 ............................. TGTTCCATATTGCCGACAATGGCGTCGGTTTC 443093 29 100.0 32 ............................. CAAAGGGCAGCTGCCCCGCGCTGCGCGACAAG 443032 29 100.0 32 ............................. GCGTTGGCCGCTGTCATACCGGCGATGATCCA 442971 29 100.0 32 ............................. GACCCGACCAGGCCGGAACTGAAACCGGTGAA 442910 29 100.0 32 ............................. TGTACGCCGAGGATGGCGCCACCGTATTGGCC 442849 29 96.6 32 ............................T TCGTCAACGGCGGCGACGTCGCCACCTTCGGC 442788 29 100.0 32 ............................. TCGTACATCACCCACGGCCCGCAACAGGTGGT 442727 29 100.0 32 ............................. CCCGACCAGAACGTCGATTCTGCTTTCATTTT 442666 29 100.0 32 ............................. CGCGGTCAACGCCGGCCAGGTGGCCAGCAGCT 442605 29 100.0 32 ............................. CAACCGTGATTGCCATGGCGCCCATGTGAAGC 442544 29 100.0 32 ............................. TTGGTTAGCAAGCGCGAATTGGTGGCAGCAAT 442483 29 100.0 32 ............................. TGCTCGCCAACCGTCACGCGGACCGTGTTCGC 442422 29 100.0 32 ............................. GTGACGATGTCTTTCACCGCATAGGACACGCC 442361 29 100.0 32 ............................. TCGAGTATTGCGCATCGGAGTTGACAGCGCTC 442300 29 100.0 32 ............................. GCGGGTTCCCAGTTCGATATGTGCCAACTGCT 442239 29 100.0 32 ............................. CTCGCCATGGATAGTGGTGCGGCCGACGTGTA 442178 29 100.0 32 ............................. TCGAATCCCTCACCGAACAGATCGACGTTGAC 442117 29 100.0 32 ............................. TACACCTTGGCGTGGAACATCTATCGACTCGC 442056 29 100.0 32 ............................. CGATCTCACTTGGCGCCCAGTAGACATATTGG 441995 29 100.0 32 ............................. TAAACGTTATGTTTCTAACGTTTAATTTGAAC 441934 29 100.0 32 ............................. CGCAATACCCCTCCTTCAACGCCCTGTCGAGG 441873 29 100.0 32 ............................. GCTAATGGAATCAGGATCCACCAACGTGTCTT 441812 29 100.0 32 ............................. GACATGAAGCGCTTTTTTCAGCTGTGCATCAA 441751 29 100.0 32 ............................. TATGTGAGCGATTTGGAAGAGCATAGGCATAA 441690 29 100.0 32 ............................. GCCTATAAACGATGTTCTGCACCGCGTTACCG 441629 29 100.0 32 ............................. AAAAAATCCAGGCCGTTTTGATGATCCTCGCA 441568 29 100.0 32 ............................. AATTACCGTGACTTTTGAGACCGGGGAAACTA 441507 29 100.0 32 ............................. GCCACCGCACCGACCCCGGCCCAGGTCGCGCA 441446 29 100.0 32 ............................. GCCCGGAGGGATCGGCTGCGTGCTGCTGGTGT 441385 29 100.0 30 ............................. AAGTGGGACGCGCGATACTCGAACTGAGGA 441326 29 100.0 32 ............................. ATTCCCGACTATGCTCCACTCTGTCGGGCGGT 441265 29 100.0 32 ............................. CTCGCGAATGTCTTACCCTTCTTTGCGGGGTC 441204 29 96.6 32 ............................A TCGTGGGGCCGCTTGTGCCTGTACGTGGCGAA 441143 29 100.0 32 ............................. CGGATGATCTCGACGCCTGTCGGCTGCTCGAC 441082 29 100.0 32 ............................. GCACGTTCGGGCGCAAGATCAACGAGGAATGC 441021 29 100.0 32 ............................. GTACACGCCACCTACGAAAAGCCCGGTAAGAA 440960 29 100.0 32 ............................. CTGACCACGGACGGCGCCATGAATATCAACGC 440899 29 100.0 32 ............................. CGCACGGCCTCGCGGTGGCGAACTTGGAATGG 440838 29 100.0 32 ............................. GTTGGCGTGAGTGAGGGCGGCATTGGCGCCAG 440777 29 100.0 32 ............................. AGGCAACGAATGGCGACCCGCGCAGCATTGAC 440716 29 100.0 32 ............................. TCACCGAGCATGACAACCCGCACAAGGGCGGC 440655 29 100.0 32 ............................. GTAGTCGCAGAGTGCCGTGCTGAAATGCTGAA 440594 29 100.0 32 ............................. CACCTCGTTGCGAACTTTGCGATAACCATCAA 440533 29 100.0 32 ............................. GCGCGTAGGCTGTCAGGAGCGCTGGTGGTCAG 440472 29 100.0 32 ............................. TACCAACAGACCACGCAAACGCAGTTGGCCGG 440411 29 100.0 32 ............................. CCGCTTGTATCGCTTGTGGCGCTTGCGCGATG 440350 29 96.6 32 ........T.................... GCAATCGCGGCACTGGCAATCTGTATTTTCGT 440289 29 100.0 32 ............................. ACACGCAACAGCGACAACTACATTCAATCCAT 440228 29 100.0 32 ............................. CCACCCAATCGGCTACCCGATCAGCCCGACCG 440167 29 96.6 32 ..............A.............. CGCTTACTTTCTCAGTACCGCGCAACGCCAAT 440106 29 100.0 32 ............................. CTGATTTGCAGTTCCTGGCCGTTGGCGCGCAG 440045 29 93.1 32 ....C...G.................... CAGGAAATAATTTCGGATGCTGGAGATATCGA 439984 29 93.1 29 .................A.......C... CTTGGTCAGCGAAAACATCAGCGTCGACC A [439957] 439925 29 82.8 31 .........A.AG........AG...... GCGGTCTCGGGTGGCGGCTGACATTGCGGAA 439865 28 86.2 32 ..A..................GC-..... TGATATCCGATTTCGAAGTAGCCGTTGGCGCT C [439857] 439804 28 82.8 0 T......G.T.....T....-........ | ========== ====== ====== ====== ============================= ================================ ================== 69 29 98.9 32 GTGTTCCCCGCGCTCGCGGGGCTGAACCG # Left flank : CATCGAGACCTTGCTGGCCGAGGGCGGCATGACGCCGCCCGTCGCTCACGCCGAATCGGTGGCGCCCGCCATCCCCAACCCGGAGAGCATCGGCGATGTTGGTCATCGTTCTTGAAAACGCGCCGCCACGACTGCGCGGCCGGCTCGCCATCTGGCTGCTGGAAATCCGCGCCGGTGTCTACGTCGGCAACTACTCGCGCCGCCTGCGCGAGCACATCTGGGCCCAGGTCGAAGAGGGTATCGAAGACGGCAACGCCGTCATCGCCTGGCGCAGCAGTACCAATGAGGCAGGTTTCGACTTTCTGACCCTGGGAGAAAACCGGCGCATGCCGGTCGAAATGGATGGTATCAGACTGGTATCGTTCTTCCCTCCAGCCATCGAAGACGAGCAATAACGGCTCGTTCTTTTCTGTTGTTCTTTAATAAATAAAATAGCTTGTAAAATCGGTGGGAAATTGAGGGGGTGATTTTCCCTTATTTTTCAATGGGTTATAATTGGT # Right flank : GAACATGTATTTGGAAGCGTCTAGGGTGTGTCTGACTGAATTCGCCGCAGCCACAACATAATTGTTGCCAAAATGACGGTAGCGAAAAAGTTGTGGCCGCGCTTTTCATGGCGCATTGCTACTGCGCGAAAATCTTTGAGGCGGTTGATTGCCTGCTCGACGACATTGCGTCCGCGATATGCATTAGGGTCGAAGCGTGGTGGGGAGCCGCCCCTACTGCCTTTGCGCAAACGGTTTTTCTTAGCGTCGAGTCTTTCGGGGCAGATGCAGCGGATGCCACGCTGTTGGATTTGTTGCCGATAGCAGCGCGCGCCGTAGGCGCGGTCAACGCGTACCGCAGTAGGTCGTTGCCGAGGTCGTCCCGGCCCCGCACGAGGAACGTGAATGGCGTCCAGTACCGCGCCGATCTGTGCGTCATCGCTACATTGACCTGCGGTGATCACAACGGAAAGTGGCAACCCATGACCATCAACACACAAGTGAATTTTGCTGGTGATTCC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCTCGCGGGGCTGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCTCGCGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [22-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,5.18 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 459029-453146 **** Predicted by CRISPRDetect 2.4 *** >NZ_WHIV01000002.1 Duganella sp. FT27W NODE_2_length_1288030_cov_26.724728_2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================================================================= ================== 459028 29 100.0 32 ............................. GGAAAGCAGAGTTTTCCGATACCATCGACGCG 458967 29 100.0 32 ............................. ACGATCCGCTTTTGTCCGGCTCGGACTGCGGC 458906 29 100.0 32 ............................. ACGACGACCGTGATATCTCGCGTGACGCCGAT 458845 29 100.0 32 ............................. TTACTGCTACGTAGCCCGGTGATGCGGTCGAA 458784 29 100.0 32 ............................. CCATATCCGTCCGTGGCAAACGCACCTTTGCG 458723 29 100.0 32 ............................. CTCGACCGTCAATGAACCCACACCAGCAGCAC 458662 29 100.0 32 ............................. AGTTGCGGATCAGGGATATCGTGCTCACCAGC 458601 29 100.0 32 ............................. CGATCGATTCCTCGCCGGCGCTGGTCGACGTG 458540 29 100.0 32 ............................. TGGATCATCAACATTGGCGCCTCGGTTAGTGG 458479 29 100.0 32 ............................. ATCGTTCCTTCCTTTAGTGCTACTGCCATGTT 458418 29 100.0 32 ............................. TCCTGCATCTGGCTTACGGGCCGGATTAGCTC 458357 29 100.0 32 ............................. CCGCCAGAAAGCCACTGCGGAACGACAGTTTC 458296 29 100.0 32 ............................. CCTGCGGGCAGGCCGGTGGAGAATGGGCGCGG 458235 29 100.0 32 ............................. CCGGTGCGAGACGGCAACGGATTGGTCTGGTC 458174 29 100.0 32 ............................. ACCTTTTGGATTGGAAACCCATATGAGCATCA 458113 29 96.6 32 ............................T GCGGCATCATCTCGCGCCTGCAGCAACTGGCT 458052 29 100.0 32 ............................. CTGTCCAATGAGATACAACGCTTGCCGCCGTC 457991 29 100.0 32 ............................. CACGTCTGTTGCTTGGTCGGCTGCGTGCCGTC 457930 29 100.0 32 ............................. TAATGCACGCCAGGCACGATACTGCCCAGCAG 457869 29 100.0 32 ............................. CATCAAGAGAAATTGGATGCTTACGCAAACGC 457808 29 100.0 32 ............................. TGGGTGTCGTCGCCACCGTGGTCAGCAACGAT 457747 29 100.0 32 ............................. GGCAACTTTGATGTTGCCCATCTTCGAGAAAT 457686 29 100.0 32 ............................. CATCTTCTCGATGTCGAGCGGTGGCACCGTAG 457625 29 100.0 32 ............................. ACCTCGACGGCAATCAACCTGTCCACCGCAAC 457564 29 100.0 32 ............................. GATAGCGCTGGAAACGTGTACGTGTCCACTGA 457503 29 100.0 32 ............................. ACCATTGGTGCTGATCGCATGGTGACGCTCAC 457442 29 100.0 32 ............................. TTCCCGCTGTCGCAGGGGTTCCAAACCTTCTG 457381 29 100.0 32 ............................. CCATCACCGACCTGTGATCGCTTGATCGGCGG 457320 29 100.0 32 ............................. TCTCTCGCCACTATGTGGAAGTTGAATTTAGT 457259 29 100.0 32 ............................. CTACGATATCGCGGATTGCATCGAGCGGATCA 457198 29 100.0 32 ............................. CTTCTGTCCGTCTGGTACAGAGTTGTAATACG 457137 29 100.0 32 ............................. CTCTCCTACTGGGAGGCGCTCAAAAACATGGG 457076 29 100.0 32 ............................. TACGGCAAGAGCCTGACCGCGCAGCAGCGTGC 457015 29 100.0 32 ............................. CTGCGCATTACTGCTGGCGCTGCTGCTGGCGG 456954 29 100.0 32 ............................. GCTCGAAAAAATATTCGTAATAGTCGGAAGGT 456893 29 100.0 32 ............................. CAGGCGAGACTTATCCGCAGCTTTTCGCGGAA 456832 29 100.0 32 ............................. CGGCCTTCGTTTTCTGTCCGACGTGCCGCCGG 456771 29 100.0 32 ............................. CTGGACCATCAACCTTCGATGCGCACGTGGTT 456710 29 100.0 32 ............................. AATTCTAATGGTATGCCTGGCTATCCTTCGTC 456649 29 100.0 32 ............................. AAGCGATCAACTGCCATCACAACTACGTGGTA 456588 29 100.0 32 ............................. CGACGATCAAATGCTGGTGCGCGGTGAAATTC 456527 29 100.0 32 ............................. ACGACGCACTAGCAGGCGCGTTCTATTCACTG 456466 29 100.0 32 ............................. GCATGGAGGTGCGTGTGGTGGGCTACATCGAA 456405 29 100.0 32 ............................. TACATTGACTGCGCCATACGCCACCGTGCAAC 456344 29 100.0 32 ............................. CGTACTTCGTACCAACTGGTACGGATTACTTC 456283 29 100.0 32 ............................. GAAAAATCACCATCAACGATGGCGCTGGCATC 456222 29 100.0 33 ............................. CGATTGGTGTCCAGCCCTTTGCGTGTGCGGTAC 456160 29 100.0 32 ............................. CGTCCTGTCCATGAGTTTCCTACTTAACGTGA 456099 29 100.0 32 ............................. GCGAGTTGGCGCGCAGCACGCTGTAAGCCGTG 456038 29 100.0 32 ............................. AACGCGGCCAGTTGCAGCCTATCCCCGATACC 455977 29 100.0 32 ............................. ACCAGATCATCACCCAGCGCGACGCCTTCCAC 455916 29 100.0 32 ............................. CAGATCGATGTGCCGGGCGTGTAGCTGCCGTC 455855 29 100.0 32 ............................. GCTGCTAATCCGGATTGGGAGGTCCCGTTCTA 455794 29 100.0 32 ............................. CTATTACAAGCGCTAAGATGGCGTTTCGCATA 455733 29 100.0 32 ............................. GCGAGCACGGGTGTCCTGCAATCTTTTCTGGT 455672 29 100.0 32 ............................. GCTGGGACTGTGCTCGGCGCCGGCGCCCGTGC 455611 29 100.0 33 ............................. CAGTGAGCGCGAACCATGCTGCGGTCTTCGGTG 455549 29 100.0 32 ............................. GTGGGCCGCATCCGGTTGAAAAACGTGGTGGG 455488 29 100.0 32 ............................. CCACCTCATGATTATTGAGAGTCATCGGTATT 455427 29 100.0 32 ............................. CGGCCATCTCCGCAGCGACGGTGGCCTGAGCG 455366 29 100.0 32 ............................. TTTCCCTCCATGAAATAGTGCAGAGCGTTGCC 455305 29 100.0 32 ............................. CGAGTGTACGAAGAGCGCGGAGAGCAGATCAA 455244 29 100.0 32 ............................. CCTGGGATCGTCATTTTCGTGGCCGAGTTGGC 455183 29 100.0 32 ............................. CGTACGGCGCCGATCGAGAGAATGGCCGCGTC 455122 29 100.0 32 ............................. TGAGTCTGTCGCTGCTGCGCGCCCTGTTCAAC 455061 29 100.0 32 ............................. CCTGAATGGCTCGCTGTCCACGCTGCGCGGCA 455000 29 100.0 32 ............................. CCGCATCCGCTCCTAACGCGGCTCTGGTGGCG 454939 29 100.0 32 ............................. GCTGCTGCCCCTGTGGTGCCTGTAGCAGCACA 454878 29 100.0 32 ............................. CCAATTCTTTTTCCAGATAGCTGATGCGTTCC 454817 29 96.6 32 ............................T ATTCGGCTACACCCGCGTATCTTCTCAGGAAC 454756 29 100.0 32 ............................. CATTCTTCGCACGTTACTGGCGGCGGGGGCGC 454695 29 96.6 32 T............................ GCGGCCTATGCGGTGCGCAGCGTTGCCAGCAA 454634 29 100.0 32 ............................. CAGGACGGCAGATTTCGCCAGGTGAGCAATAG 454573 29 100.0 32 ............................. CTCACTGATTTTCTTTTTCGCTGCAACGAGTA 454512 29 100.0 32 ............................. AAACCGGGCGAGACGTATTTGCGTAGCAAATC 454451 29 100.0 32 ............................. CCAGCTTGCGCGGTATTCAATGAGCGGCGCAG 454390 29 100.0 33 ............................. GTGATCAGCTGGTTACCAGACGCATCGCGACCC 454328 29 100.0 32 ............................. ACGGCGCCGAAGCCCCCTTGATCTAACCCTTC 454267 29 96.6 33 .....T....................... TTGTAGGCGACGAGCACCGGGGCGCCGGCCGAT 454205 29 100.0 32 ............................. GCCATGGACGCTACGCGGACGGTCATCGAGAA 454144 29 100.0 32 ............................. TCGTGAACGTTGGTCCACGTAGGCGTAGCAGC 454083 29 100.0 32 ............................. GACTATGACATGCGTATCGCTCAGTGCATCGT 454022 29 100.0 32 ............................. ACACGAGGTGGCCATGCCCGACACTACCCGCC 453961 29 100.0 32 ............................. GCGGCGCGGTTGAGCCCATGATGCTCAAGGGT 453900 29 100.0 32 ............................. GCCGTCAGCACAGCGTCGAGGTGCTGCATGAC 453839 29 100.0 32 ............................. GCGGCGCGGTTGAGCCCATGATGCTCAAGGGT 453778 29 100.0 32 ............................. GAATACGCGAACCGAACTAGCCACGTTTTGAG 453717 29 100.0 32 ............................. CAGCTCGCGTTCTCGCTGGGGCAGGTGGGCCG 453656 29 100.0 32 ............................. CCAACTTGTGGAATTTATTGTGGGCATACCAC 453595 29 100.0 32 ............................. GCTTACTGGTACGGCCTGGGCAACCAGTATCA 453534 29 96.6 32 ...................A......... TCGATGCTCGGGGAGGTGGCCTGCAACATGAA 453473 29 96.6 87 ...................T......... GTGCAATGGCTCGGCCGCACCGGTGCGCCGGAGTGTTCCCCGCGGGGCTGAACCATTCAGGCGTCACGCCCATAGCGTCACGCCGTC 453357 29 100.0 32 ............................. GCCAAATCCGCGAAGAGTTCGAGGACTCCGAC 453296 29 93.1 32 .......TG.................... CGTGGAAAATCAACCTTAAACTCTACTCCCGG 453235 29 96.6 32 .................T........... TCGGCCTGTGCGTGAACTTCGACAAAACCAAT 453174 29 69.0 0 ........T..AT..AA..A...A.G.T. | ========== ====== ====== ====== ============================= ======================================================================================= ================== 96 29 99.4 33 GTGTTCCCCGCGCTCGCGGGGCTGAACCG # Left flank : GAGGTGCGCATGATATAGAAAATGAGAACCATTCGCAATTGCGGTCGGTACGTAGGGCGTGGGGCGGTTTCGTCGCCAAAGCGGGGTGGATTCTGTATAATGCCCGCTGACAGGAAACGTGGCCGAGTGGTTGATGGCAGCAGTCTTGAAAACTGCCGACGGTTTGCGCCGTTCGTGAGTTCGAATCTCACCGTTTCCGCCAGGATACAAACAAACCGCCCATGAGGCGGTTTTTTGTTTTCTGGCGGAAGCGAGCAGGGCTCCTGCTGGCCTTTCTTAGCCGGTGACCAAATTACAGATAGCTTTTGTCTATCTTTCACCGCATGACAGTGAGGCGCTGTCAAGCTTAAACAGCTGCCCGAATCAAGACCAAAGTATCGTCACATGGCTCCATTTGCTATGATGTATAGCGCCAAGATCTTTAACAATTTAATAATGCAAAAATCGGTGGAAAATAGAGGTACTGTTTTTCTTTTATTTTTCAAGGACTTATAATTGGA # Right flank : CGCGACTTTCGCCACAGTGGCACGTTTATCGGGTGCTCCCCGCCACCAAAACGCCACAAAAATTATTGCTAAAAAAAAATAAAGGTTTCATTTTCTAATAAAATAAATTACATTTGTTTTTTTTGTAAAACTCCGCATCTGCCAATGACCGACAATGCAGCAATTAACCAATTCTGGAACTACTGGGGCAAGGCAAAACCTGCTGATAGCGGGCCGAAATTTCATCGGCTGGTTTATCACAGCCTCGACGTGGCCGCAGTTGGTGAGGCATTTCTGGAGCAATCTCCCGCGCTGCTCGATCTTTTTTGCCACCGTCTGCAGTGCTCGCGCGCAGCGTTTCTTTCGCTAGCCAGTTTTTTCCTTGCCCTGCATGATTTGGGGAAATTCAGTAATACATTTCAATTGCAGCGTGCAGATCTTGTTATGGATTTGCAGGGGCGTGAAGCCAGTGCCAGAAACTATTCGGAGCGACACGACACGCTTGGATTCTGGATATGGAA # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:-0.03, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCTCGCGGGGCTGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCTCGCGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [17-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,5.18 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //