Array 1 27-897 **** Predicted by CRISPRDetect 2.4 *** >NZ_LYNM01000036.1 Acinetobacter baumannii strain AB363 Contig130, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 27 30 100.0 30 .............................. GAAGTCATGAATGTAGGTGTTGAGGATGGC 87 30 93.3 30 ............................GA ATTGCACTTGCTAAGCCAATAATGCCAACT 147 30 100.0 30 .............................. ATGCGGGTTGTCCACCAGTTATGACTACTT 207 30 93.3 30 ............................GT AAATATGCTGCTTTAACCCGCCAAACGAAT 267 30 100.0 30 .............................. CATTAAGACGAATGCGGGCAATTGGTAATG 327 30 93.3 30 ............................GA GATTCAAGTTTCACCGGATGGCACAAGTAA 387 30 93.3 30 ............................AC CAGAAAAGCAGAGTAAAGCTTCACAGCCAT 447 30 93.3 31 ............................GT AAAAAAGAACATTTCCAGCAAAAATTGACGA 508 30 96.7 30 .............................T GCTGCCTGCAAACTTGTTTGGGGCTTTATG 568 30 93.3 30 ............................AC TGGAATTCAGCAGTAAATAAGGGGTTAAGA 628 30 96.7 30 .............................T TAAAGCTAAATGAGGGTTAAACCTAAGAAA 688 30 90.0 30 .......T....................AA CGTGAACAATTGTTTTAGCTTTGAACATTA 748 30 86.7 30 .............C...T..........GT TACTGGGTTGCGGAATATATTCGCAATTAT 808 30 83.3 30 A......A.........T..........AT TTTGATCTTTACTTATTCTCGCTTCAAACA 868 30 70.0 0 .......A...T.....T..C...AGCG.T | ========== ====== ====== ====== ============================== =============================== ================== 15 30 92.2 30 GTTCATGGCGGCATACGCCATTTAGAAATG # Left flank : GATTTAAATTGCATTAAGCCTTTAAAG # Right flank : TAAGATAAACAATAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTAAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGTAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCTACCAGCCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGCCAAAGTGACGGTGAAATTACCGATGCAAAATCGCAGTTACCAGAAGGTGTCATTATTGGCCGTACTTGCTTAAACTCTTTAGAGCTTGCTCAAAAAGCAATTGCCGATGGCGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAAC # Questionable array : NO Score: 5.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.61, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.31, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 22513-23564 **** Predicted by CRISPRDetect 2.4 *** >NZ_LYNM01000067.1 Acinetobacter baumannii strain AB363 Contig159, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 22513 30 96.7 31 .............................C CATGTAGCCATTTTCATACCCATTGGACGAT 22574 30 96.7 30 ............................T. CTGAAAGAGTAACTAACTGTTTAAAGAAAC 22634 30 96.7 30 ............................T. TTCCTATTTATTTTGAGCCTAATACACCAA 22694 30 93.3 30 ............................TT TCCAACGAAATTATGACGCTGACAAGTCTC 22754 30 93.3 30 ............................TT CACAAGACCATACTCACGAATAAATTGTTT 22814 30 100.0 30 .............................. CAGGAACTTTTGCAGGTCGTAGCCAAAGAA 22874 30 93.3 31 ............................TG ATTCCGAATTATTTGCGGATGAGAGCAGTAA 22935 30 100.0 30 .............................. CAGGAACTTTTGCAGGTCGTAGCCAAAGAA 22995 30 96.7 30 .............................T CGTCACAGCGCACTGGTTACTTAAAACAGG 23055 30 96.7 30 .............................T CAACAACTTTATTAGCCTTCACAAGACCAT 23115 30 96.7 30 ............................G. TACGGGTAAACCGTATGAATGGGTTGATTT 23175 30 100.0 30 .............................. AGATATTACTGGTGTATAGAGCTGAAGATT 23235 30 96.7 30 ............................T. ATTCACTTGATGCAGGTGAATCAATATTAA 23295 30 93.3 30 ............................TT TAGATACAGGCGTTGATTCTGCAAAAGTGG 23355 30 93.3 30 ............................GT TACCCAACCCTTTATCAATCTCTCGACCAA 23415 30 96.7 30 .............................G GGTGCGCTTGCACGTCAAGAATATCTTGGT 23475 30 100.0 30 .............................. CGAGATACTGTTTCAGGAGATTCACCCAAA 23535 30 93.3 0 ............................TT | ========== ====== ====== ====== ============================== =============================== ================== 18 30 96.3 30 GTTCATGGCGGCATACGCCATTTAGAAAAA # Left flank : GCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCCTAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TTTTTAAGTG # Questionable array : NO Score: 5.40 # Score Detail : 1:0, 2:3, 3:0, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.33, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [80.0-16.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //