Array 1 216693-216176 **** Predicted by CRISPRDetect 2.4 *** >NZ_PUET01000004.1 Streptomyces xinghaiensis strain OlgR2-7A contig00004, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 216692 29 100.0 32 ............................. GTGGCGCAGACCGTGCTCGGGCACGAGCGGGG 216631 29 100.0 32 ............................. GAACAACTCCTCCTCAAGTTCGTCCAACGCCT 216570 29 96.6 32 ...........................T. GCCTGGTCAGAGAGGTGGTGGGGTCGTTGAAG 216509 29 100.0 32 ............................. GCGTATCAGCGCGCATCCGGGCAGTGGGTCAA 216448 29 100.0 32 ............................. CCCCGCCCTGCCCGGAGGGGAATCCGGGAGGA 216387 29 100.0 32 ............................. CTCGGACCGGCGGACGGCCTGACGGGCCCGCT 216326 29 100.0 32 ............................. TGGACGCGGTACGAACTCAAGAACGTTGCTGA 216265 29 100.0 32 ............................. TGCTCGGTGCTGCGCACATCGCAGTTCCCGAA 216204 29 89.7 0 .............A...........A..A | ========== ====== ====== ====== ============================= ================================ ================== 9 29 98.5 32 GTCCTCTCCGCGCGAGCGGAGGTGAGCCG # Left flank : GGCCACGGGCCTGGGCATCCGGGCCTGCCAGGCCGGTCACCGAGTCGCGTTCGCAACCGCCGCCGAGTGGGTCACCCGCCTGGCGAAGGCCCACGAGACCGGCCGCCTGGACGAGGAACTGGTCCGGCTCGGCCGGATCCCGCTCATCATCGTCGACGAGGTCGGCTACATCCCCTTCGAGCCCGAGGCCGCGAACCTGTTCTTTCAGTTCATCTCGGGCCGCTACGAGCGGGCCTCGGTGATCGTGACCAGCAATAAGCCCTTCGGCCGCTGGGGCGAGGTCTTCGGCGACGATACCGTCGCCGCCGCCATGATCGACCGCCTCGTCCACCACGCCGAAGTCATCTCCCTCAAGGGAGACAGCTACCGCATGCGCGGCCGCGACCTCGGACGGGTTCCCGCCGCCAACACCAGGGAATGACCAACATCAACTGACTACGGGTCCACTTTTCATCCGCTGCCTCCGGTCCACGATTGCGCCGTTACCGACACTCGGACAG # Right flank : CTGCGGAATGGCAAGCAGTCGTTCTGGGCCTTCCAGATGCTCCAGAAGTTCACAGCTGGACCGAACCCCGTCCGCAGTCGGTCCGTGGATGGTCCGTGGACGGTGATCAACCGGGGAACAGAGTGAGACAGGGTGAGACAGCGAGCCGCAGGACGCGGCTCGCAAATCGGCCCGGAACCCCGTTCCACCTGCGGTTTGTGTGAGCTGAGGAAACTGCTCGATTCGTGCGGTCGGGGGCCATTTCAGGACACTTCGGCTTTCAAGACCGTTCCCTTAGGCCGCTCGGGCAACCCTCCCTCGCCCCCGCCCACCTGCGGCGGAAGCGCCTACAGCCTACCTGGCGGGCCCAGCCGTAGGGCTCTTGGTCCGTCCCTCGGCCGTGACCTCGGAGACCGTGCTTCCGGCCGCTCGGCGCCGCGGGCAGGCGTCCCCATGCTAAGCGGCACGATCGCTTCTCTGTGGGGCAGTTGAGGAAGCGGCACGTCTTGCTCAGGTGGACG # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCTCCGCGCGAGCGGAGGTGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCCTCTCCGCGCGAGCGGAGGTGAGCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.10,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 220794-218934 **** Predicted by CRISPRDetect 2.4 *** >NZ_PUET01000004.1 Streptomyces xinghaiensis strain OlgR2-7A contig00004, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 220793 29 100.0 32 ............................. TACTGGGCGCTGCAGGGGCGGGTGGAGCCGCT 220732 29 100.0 32 ............................. GTCGGCGAGGCCGTCGGGGAGATCGCCCCCTG 220671 29 100.0 32 ............................. CGAGAGGGGATGACGATCATCCGCGCCTTCGC 220610 29 100.0 32 ............................. CGGCACGGCGGGATCGGTTGACCGGAGGCGTC 220549 29 100.0 32 ............................. GCCGAGCCCCACCAGGACGATGCCACCGCCGA 220488 29 96.6 32 ............................C CGTCCACGAACTGCGCCGAGTTGAACACCCGG 220427 29 100.0 32 ............................. CAGATCGCACGAAAGCTGCGCAGCTACCTGAG 220366 29 100.0 32 ............................. GCCGAGCCCCACCAGGACGATGCCACCGCCGA 220305 29 96.6 32 ............................C CGTCCACGAACTGCGCCGAGTTGAACACCCGG 220244 29 100.0 32 ............................. CAGATCGCACGAAAGCTGCGCAGCTACCTGAG 220183 29 100.0 32 ............................. GACCCGGTGACGGGGCGGTCGGTGTGGTGGCC 220122 29 100.0 32 ............................. CTCCGCTGCCAGTTCGCGGTGCGCACGTCCAT 220061 29 100.0 32 ............................. GCCCCGACGGGCGGGGCGGGGTGCGGGTGGTG 220000 29 100.0 32 ............................. CCCAACCTCCGCCCCGTCGGCGGCAAGGGCCA 219939 29 100.0 32 ............................. TAGGTGGCCACATGCCGGTGCCCCGTGATCGT 219878 29 100.0 32 ............................. GATGCGGAGCCGAATGGGTGCAGGACTACTAC 219817 29 100.0 32 ............................. GCGATGTGGTCCAACGTCCTCGGCTACTACGC 219756 29 100.0 32 ............................. CCTTCGCGGATCATGGTGTCCCTTTCGGTGTG 219695 29 96.6 32 C............................ CGGGTGCCGTCGCAGCGTGAGGCGGGTGCGGC 219634 29 100.0 32 ............................. CGGATACGCCTCCTGGCTCAACGGCACGATCC 219573 29 100.0 32 ............................. CACGACGCCGCCTGACCGCCAGAGAGGACACC 219512 29 100.0 32 ............................. GCTGGCCCGCCAAGACCAGCCGCGACACCGAC 219451 29 100.0 32 ............................. TTGTACATGGTGGTGAGCTTGTGGGTTCCGCT 219390 29 100.0 32 ............................. TCACGTACGGGGACCTCGGTACGTGACCCGGT 219329 29 100.0 32 ............................. TTGTTGTCCCAGGGTGTGTAGTCGTAGCCCTG 219268 29 100.0 32 ............................. CCGTGGAAATGGACCCGGATACGGACGAGGTC 219207 29 100.0 32 ............................. TTGGCCGCCCCGGGCGTATCGGGGCGGCCACC 219146 29 100.0 32 ............................. CCGGCGTTCTCTTACCGTGACTGGCGAGGAAA 219085 29 100.0 32 ............................. ATCACCCGCCACGGCGGGCCGACCATCGCCGG 219024 29 100.0 32 ............................. GCCGCCGCCAAGGCGCTCGACGACGCCGCCGC 218963 29 100.0 0 ............................. | A [218957] ========== ====== ====== ====== ============================= ================================ ================== 31 29 99.7 32 GTCCTCTCCGCGCGAGCGGAGGTGAGCCG # Left flank : CGCTCTCGGCACCCGGCGCTCGCAGATAGACCGGCTCGTCACGCACGGCCGCGAACGCCGCCGGCACCTGGGCCTGGAACGGCGGCGTGATCTTGCCCAGGTCATGCAGCCCGGCCCAGAACGACAGGACTACCCGCGCTTCTCTCACGGGCAAGCCCAAAGCATCAGCCAGGCGCTGTCGCATACGCTCGCCGAGTAAGCCGTCCCAGAGCGCGGAGAACACAGCGGCAGTGTCGAGCAGGTGACACACCACCGGGTACGGCCGCGATAAGCCCTTCTCCTTCCCCCACATACGGGGGTCCAGGAGAGGTGTCCCGTCGGCCGGGGGCTCACTGTTCATCATGCGCCAGGGGTACCAGTCGGCACTGACAACGCCCAGCACGCCCATACACTGATCTGTCATGACCTCACCTCACAGCGCCGATTTCGCTCGGGCCGCGCTGCGACTGCACAAGGGCAAAGTAATTGCAAAGGCGCTCTAGAAGGCCAGGTCAGGAAGT # Right flank : GTCGAGCGGGGCACCTCGCACGGCTCGGATGTCGACAACGCCTCAAATTGTGCCGCCTCCAACGGATGAAAAGTGGCCCGTCTGAACGGTCTGGCTCGTTGAGTCAGGCAGGGAGGAAGGGTGATCAGCGTGGAGGACTGGGCGGAGATCCGCCGGTTGCATCGGTCTGAGGGCATGCCGATCAGGGCGATCGCTCGGAAGCTCGGGATCTCGCGGACGACCGTGCGGCGGGCGGTGGCCAGCGACCGGCCGCCGAAGTATGAGCGGGCCCCGAAAGGGTCGATCGTGGATGAGGTCGAGCCGAGGATCAGGGAACTGCTGGAGGTCTGGCCGGACATGCCGGCGACGGTGGTGGCGGAGCGGATCGGCTGGCAGCGGGGGATGACGGTGCTGCGGGACCGGCTGCGGGACCTGCGCCGGGATTACGTTCCGGCGGACCCTGCGTCCAGGACGGCCTATGAGCCGGGTGAGCTGGTGCAGTGTGATCTGTGGTTCCCGCC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCTCCGCGCGAGCGGAGGTGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCCTCTCCGCGCGAGCGGAGGTGAGCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.10,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-2] Score: 0/0.41 # AT richness analysis in flanks prediction: R [33.3-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 230531-232819 **** Predicted by CRISPRDetect 2.4 *** >NZ_PUET01000004.1 Streptomyces xinghaiensis strain OlgR2-7A contig00004, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 230531 29 100.0 32 ............................. CTGCGTGGCGACCATGCCCGTACCGAGCCCGG 230592 29 100.0 32 ............................. CAGGCCAACTACGACGGCAACCGCGGGGACGA 230653 29 100.0 32 ............................. TTTAGGAATCGCCGTCCGCGAACGCGTCGAGC 230714 29 100.0 32 ............................. AGCAGACCGCCGAAGGCCTCGCCAACGTCTGG 230775 29 96.6 32 ............................A GAAGGGCAAACGGCTGCGCGCGGAGCCCATCG 230836 29 100.0 32 ............................. CGGGGCGGGTCAATATGTGTGCACAGATAGCG 230897 29 100.0 32 ............................. GCGGCGTACGTCGCGCTCGTGGCCTCGGCCGC 230958 29 100.0 32 ............................. CAAGCGGTACACCACGGTTCATGCACAGTTTC 231019 29 100.0 32 ............................. CCTTCGGCGGAGGCCTTGGAGCCGTCCGTGGC 231080 29 100.0 32 ............................. AGCCGGGCCGAGGCCGCGCGGGCCAACCGGGC 231141 29 100.0 32 ............................. GAGGCCATCAAATTCGGTGGCTATTCCTACAG 231202 29 100.0 32 ............................. TCGAAGATTCCGCCGTACCGTACGGCGATCAT 231263 29 100.0 32 ............................. ACGCGGACCAAGGCCCGCGCCCGGAAGAAGAA 231324 29 100.0 32 ............................. CCCTCCGCGTCGTCCTCGACAACGCCGACGAC 231385 29 100.0 32 ............................. GAAGTCTCGCCGCTGCTGCTGGACATGCTGGA AGCG [231403] 231450 29 100.0 32 ............................. CGAGGAAGCGAAGGGAGCGGCCGCCGTGGCGG 231511 29 100.0 32 ............................. GGCCGCCCGCCGGGCTGCGAAACGCGGCGGAC 231572 29 100.0 32 ............................. CACCTGTCGCGTCCAGTGACGGCCCGTCAGGC 231633 29 100.0 32 ............................. CAGAAACGTGTCGTGCTGGAGGCTCTGGCCCG 231694 29 100.0 31 ............................. ACCCGCATGGCCGCGGAGATTCCGGCCTGGC 231754 29 100.0 32 ............................. TGGCTGCGGCCGCGCGCCTGGTGCCCGACGTG 231815 29 100.0 32 ............................. GTACTGCCGGGCCTGCTCGGACATGGGCTCCG 231876 29 100.0 32 ............................. TCGCCGTGCCGTGCCCGACCTGCCGACCCGCC 231937 29 100.0 32 ............................. TCCTCCGGCAAGGACGCGCAGCGCAACCCGAC 231998 29 100.0 32 ............................. CCAGCCGATCGCCTCATCCTGACCGGCGATCC 232059 29 100.0 32 ............................. TAGGTGACGATCTGGGACACGCGCCCGGCGCT 232120 29 100.0 32 ............................. CAGGCGAGAGTCTGCACGCCGGTGATGGCCCA 232181 29 100.0 32 ............................. AGCACGGAGCCCGGTGGGCAGGTGGCGCGGCG 232242 29 100.0 32 ............................. ACGGGTGCCCTGTCCCGCTCCTACATCGTGGA 232303 29 100.0 32 ............................. CTCACCGTCTCCGACGCGACGGCCGAGACCAT 232364 29 100.0 32 ............................. CTCCTCGCGGTGAGCGCGGCGGACTGTGTGGA 232425 29 96.6 33 ............................A GTGAGGGGGGTCGAGTTCTTGCCGGACGCGGCG 232487 29 100.0 32 ............................. CATTGGGACACGATCGTTGCGAAGACGCGGGC 232548 29 96.6 32 .......................A..... GACGGTTACTCGATCGCGCTGCAGATGCTCGC 232609 28 96.6 32 ......-...................... AGCGAGACGTAGCTGCGGCCGGTCACTGCGGT 232669 29 100.0 32 ............................. TTCGCGGACCGTCTCCGCGGCCTCCACGTCTA 232730 29 96.6 32 ................T............ ATCGTCTCGCCTGATCACGTTCGCCGTGCCAT 232791 29 89.7 0 ..........T...........C..T... | ========== ====== ====== ====== ============================= ================================= ================== 38 29 99.3 32 GTGCTCTCCGCGCGAGCGGAGGTGACCCG # Left flank : CCCGCGCATCGTCGCCGACATCCAGCAACTGCTCGACCCGGACACCGAGTACGAGGTCCCGGACCCGGAGGAACAACTGGTCGACCTGTGGGACCCGGTAGCCGGCGCGATCCCCGGCGGGGTCAACCACGGAGTGGAGTCGTGACCGCGCCCACGAAGGGACACGACCCATGTCCTCAATGATCGTCATCTCCGCCACGGCGATCCCCGACCACCTCCGCGGTGCCCTGAGCCGCTGGCTGCTGGAGGTAACACCGGAGCTGTACGTGGGCACGGTCTCGGCCCGTGTCCGCGACGAACTCTGGACCTCGGTCGCCGCCTGCGCCGGAGACGGCATGGCCGTCCTCGCTCACCCCGACGACAACGAGCAGGGCTTCACCCTCCGCACGGCCGGCACCCGCCGCCGGGAACCGATGGACTTCGACGGCTTGACCCTGATCGCCTTCCGCAGAGAGAGTCAAGAAATGGCAAACCGCTTCTGAAAGCGCAGGTCGGGAAGT # Right flank : GGTGAACCGAGTGTCCAACGCTCGGGCATTGGACGGGTTCCGGTCGGCTGTGGTGTTCCTGTCGAAACAGGAACACCACAGCCACCGTGCCGTCAGTTGTCAGGATCTGCCTCCAAGCCAGCCAGCGCCACGTCGATGAGGTGGTTGGAGCTCTGCTGGGCGCCCCGTAGGACCTTGGCGTAGAAGCGGTAGAGGACGGCGAGGCTGTGCCCGGCGCGGCGGGCTACTTCGACCGGGTCCACTCCGGCCTTGAGCCACAGGGAGATGCCCGCGTGGCGGAGGGAGTAGGGGACGTCTGCGAGGGATGTTCTGGCCTCCTCGGGGCTCAATGCCTTCTCGCGGGCCTTCTCCCACAGTTCGCAGTATTCGGTGGAGCGGACCCGGCCGCCGCGGACCGCGCGGAAGAGGCGGCCGTCCGGGGCGGTGCCGTGGGTGGCCAGATGGGTGCGCAGCATGCCGACGAGAACGGGCGGGATCGGGACGGGGCGGGTCGCCTTGCG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGCGCGAGCGGAGGTGACCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCTCCGCGCGAGCGGAGGTGACCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.70,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //