Array 1 947838-947999 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACBEB010000001.1 Clostridium botulinum strain DFPST0045 1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 947838 30 100.0 36 .............................. AATGATATATAATGGCAAAAGAATACGAGGTATTCC 947904 30 100.0 36 .............................. TGTTCATATGTACCTTTAGAATATTCGACCCAATCT 947970 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ==================================== ================== 3 30 100.0 41 GTTGAACATTAACATAAGATGTATTTAAAT # Left flank : CATAGGCTGATCCAATAGTTAAAAAAAGTTCTGCAGTTATATCAGAATGAGTAAGGGTATAGCGTCTTCCTAAAATAGGCTCCGTTGAGGTTACACCATTTCTAAATTCAACTGAAAGTTTATCAGTATTCAATTTGTTCATTTAATCCCTCCCCATACAATACGTTTTATACAATATTATATGATAGGATTTATGAATTTAGTATATTTATATATAAATCAATTTTAATTATAATATTTAACTTAAATCTTGTATCAGATCTTGTACTACCAATAATATATCAGCTAATAGTACAAATAAAATATTTTCATATTAATTGAATTTTTCCAGGCATAATAAATTTATAAACCTATTCTAGTCATTGATATATAAGGATTGGAATAGGTTCTTATTTTATATTTATAAAAAAACAAAATCACTTGGAAAACTTTCTACGAAGCCTTGTAAGATCAATGGGTTTATGCTATTCTTAAAAATAAGGAATGGCTATTTTACTATG # Right flank : TTTGTACATAATCTGAAATTAAAGCGAAGTAACCCTTGAAAATAAAAGTACTAACAATGTTCTTTGAAGACTGAATAATACGGTGTTAGGAAGTAAAAATTTTTTATAACAAAATATATCTTTACAAATGTAGTAAGGTGGCTTACTATATAAATGAGGAGGTTTCATTATGGAAAGTTTTAAATTTAGTCTTAGGGATATACCAAAACGAGAGATTTTAAATGAATATTCTAGCCGATTTCCGGGTATAAATGTAGATGCAGTCGAAAGCTGTATAGCACTCCTCAGGACGGCTTCTGATATTTCAAAAATACTTGATGAACACTTTTCTAAGTATGGCATTTCGGAAGGAAAATTTACAATTTTGATGCTGTTATATCGACAGAGTGATTATCAATTATCTCCAATATCTCTTAGCAAAAAAGCTGAAGTTACTAAGGGAACTATGACAGGATTAATAGCTGGCCTTGAAAACCAAGGTTTCATAGAGAAAATCTCCA # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACATTAACATAAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [70.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 2 1841246-1841014 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACBEB010000001.1 Clostridium botulinum strain DFPST0045 1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ==================================== ================== 1841245 31 96.8 35 G.............................. TAGCTTTCAATGCCATAGCCATAGCTTTGTTACTA 1841179 31 100.0 35 ............................... TTATTTATCACCTTCTTTAATTGTATAAATGATAC 1841113 31 100.0 36 ............................... AATATAACTTTAATAGTATGATAATCTGGAACTATT 1841046 31 93.5 0 .........A....................A | TA [1841018] ========== ====== ====== ====== =============================== ==================================== ================== 4 31 97.6 36 TGTTGAACATTAACATGAGATGTATTTAAAT # Left flank : AATGCTGAAAATATGGCTAATGCTATTGTTAAAGGACTAGTAGGGGAAACTACAAGCAATATCACACCAAGTCAAGCATCTACAAATAATAATAGTTGGATTAATTTAGATGGTAAAACAGGCACTATAAATACACTAAGTGGTGTAAATATTAGGGAAAAGAAATCTACATCTAGTAGAATATTAGGTGCTTTAAGTACAATTATATAGAAAAGAAGGAGATTGGATACACATTTATTATCCTCCACATGGTGGATATGTTTATGCTAAATATATAAGATATTAAATTTTTGAAGGTATTTCTATAATGTGAGTAACTTTTATTTTTCCAACCTACTTTAATTTTAAAATCTATCTTAACCATTGCTATACAATGCTTTAGGGTAGGTTTTCTATATAAATTTTAAATCATCTCAATTGGTTGGAAAATTTTCTTTAGAATCTTGTAAAATCAATGCTTTTATGATATCTTTAAAATTAAAGAATGGCTATTTTACTAT # Right flank : ATAATAATTGTAGCTTACGCTGTAGTTATTATTTTTTTATTATTCAAAGGAATTTTCTAACATTTATAGAATATTAAATATAACGGCTTACCAATAATTTAGGCAACCTCCTTGCTTAAAAAAAAGAATCCCAATAAAAAGGGGTTCTTTTTGAATGGAATTTTCTATATATCTATATATTGGTGCTATGTTTTGGTCTATTCTTATTATATCCAGATGTAGAAAAATTAATCAATCAGAAATATATAATATGTAAATTTTTAAAGGTACTTCTGTAATGGAAGTACCCTCTTTTTTTATTGGAAAAATTATCATAATTTATATAAATTTATCATGAAAGCTATTGATTTATTATACTACACGTAGTATAATTATAATTGTAAGGAGGTGAGAAAAAAGGTGGTCAAATTAATAAGAAAATTAAAAAAGCTTGATAAACTACTGGGAATAGTCATCAAGCTACTGGTAAAAATAACAATCATAATAATGCCGCTTAAACA # Questionable array : NO Score: 5.74 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TGTTGAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:77.42%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 3 2270761-2270465 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACBEB010000001.1 Clostridium botulinum strain DFPST0045 1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ================================== ================== 2270760 32 96.9 34 G............................... TTATATTCTCTATTTTTAATCCTTTAAGTATTGG 2270694 32 100.0 34 ................................ GATAAATTTATGAAAGGTCAAGGAAGTATAGCAG 2270628 32 100.0 34 ................................ TGTAATAATACACTAATACAGTTAAAGTGCAAGA 2270562 32 100.0 34 ................................ ATTGTACTTTATGATTTAAAACTTGACTTTTATC 2270496 32 93.8 0 T..............................C | ========== ====== ====== ====== ================================ ================================== ================== 5 32 98.1 34 AATTGAACATTAACATGAGATGTATTTAAATT # Left flank : TAATGTTTCATAAAGAAATAGATTATGAAAATATTAAAGAAGGAGAATTAGATGAAATTTTAGAGGGGATAAAAAAAGAATTTTATAATCTAATAATATCAGTAAAAGAAGAAAATAAAAATATAATATTAGTTACTAATGAAGTAGGTTATAGCATTGTTCCAGCCTATAAATTAGGTAGGATATTTAGAGATTTTCAAGGTATTATAAATAAATTTATAGCTTCTTTGAGTGATGAGGTTTATTTAGTAACCTGTGGAATACCCTTAAAAATAAAATAAAATTAATTTTAGTAACTAATTAATCTAACTATAAGTAAAAGAATTTTCCAACCGCATTTAATTTTAAAATCTATTCTAGGTATTGAAATATAAGCTTTAAGATAAGTTTTATCTCTACCTTTATAAAAAATGGTAAACGGTTGGAAAAATTTCTTTAAAACCTTGTAAAATCAAGGCTTATATGATATTCTTAAAATTAAGAAATGGCTATTTTACTAT # Right flank : AGCATGTAAAATAAGGTGATTCAAAATAAATTAAATCTATTTTGAATCACCTTATTTTTGTGTAACAAATACAAGCTATTTTAGATAATATTTTAAAAAAGCATATAATTATTATTTTATATTGTCACAATAAACATTAATAGCATCTCTTAAAAATTTAGAAAGACCAGTTTTATATTTATCTATATTAGCAGTAAATCTTTCATCATTAACATAAATTTCTCCAAGACCTCTAAATATTTCAGGAGTACAATCATAAAAGTTTTTTGAAATATGCTCTCTAGATTGGTGTATATATTCTTGAACTTCTTTATCATCTGGATTTTTGTCCATAAGATTTGCTAGTTTTTTATAAATAATATCCCAATCTTTCATTATATTACTCCAATCTTCCTTTGTATATTTAGATGTTTTTTCATTACTTTCTTTATAAGCAGAGGTGTTTCCATATTTTTCTTTTACCTCTTCTGAATATTTTCTTTGATGCTCCTCTATTTCAG # Questionable array : NO Score: 5.96 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AATTGAACATTAACATGAGATGTATTTAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:81.25%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //