Array 1 13901-12537 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_QJOS01000024.1 Lactobacillus helveticus strain FAM8106 FAM8106c1_scf0024, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                     	Insertion/Deletion
==========	======	======	======	================================	====================================	==================
     13900	    32	 100.0	    35	................................	ATTGATAAAAGACTGATACATGTGGCGAGTAACCT 	
     13833	    32	 100.0	    35	................................	AAAGACGTGTGAATGGTCAATGGATCTTGTACAAG 	
     13766	    32	 100.0	    34	................................	GTATTCCAGCCAAAGCAGATGGCTTTGCCACCTA  	
     13700	    32	 100.0	    35	................................	ACCGGTGAATCGTAAATGTTAATCGAGCCACCAGC 	
     13633	    32	 100.0	    35	................................	ATAGCGCTATTAACAAACAAGTTATGCAACCGCTT 	
     13566	    32	 100.0	    34	................................	TTTTGACTTTTGCTTGTTACGACTAATCAGGAAA  	
     13500	    32	 100.0	    35	................................	AATCTATGTAAATAAGAAGTGTCAGAAGTTAAGCC 	
     13433	    32	 100.0	    34	................................	ATATGCGTCAGTTTCGCTTTCATGGTTAAAGCAT  	
     13367	    32	 100.0	    35	................................	ACTAATGGAATATCCTTCATGCGCAAGCCTGTAAA 	
     13300	    32	 100.0	    34	................................	TTTAGTGAACAAACTCCGTTGCGATACCGTCACT  	
     13234	    32	 100.0	    35	................................	TAAAATACAGTTGACTTTTTAGAAGATTTAAGTAA 	
     13167	    32	 100.0	    35	................................	TAATATCTGTGAAGCAAACAAGGATCACTTCCTTG 	
     13100	    32	 100.0	    34	................................	TTAAACGCCTACAAAGAACGTCACAATGCAAACA  	
     13034	    32	 100.0	    34	................................	CCATTAAATAATCATTACTTGTATTAAATAAAGT  	
     12968	    32	 100.0	    36	................................	GTTTTCGGGTGTCGGGTTTAATGGAGTGGTATCGGC	
     12900	    32	 100.0	    34	................................	ATCAAAGCTATCCTGCTATTGCTGATGGCTGGTG  	
     12834	    32	 100.0	    34	................................	AGTTTTTGAACGCAATTCATTACCCGGTTTTTTC  	
     12768	    32	 100.0	    34	................................	ACTAATGAAGTAATCAGTAAGGTGTTGGGTTACA  	
     12702	    32	 100.0	    35	................................	TACTTAGATGCTGAAATGAACTTAGACCCGTGGAT 	
     12635	    32	 100.0	    35	................................	AAGGATATTGACGGTACTGTGTTTGAAGTTTTCGG 	
     12568	    32	 100.0	     0	................................	|                                   	
==========	======	======	======	================================	====================================	==================
        21	    32	 100.0	    35	GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	                                    	       

# Left flank :   GGAGATCTTGACGAATACCCACCGTTTATGTGGAAGTAGGTATGCAGCATGATGGTAGTAGTTAGTTACGATATTAATACGGAAAGTAAATCTGGTCAGCGAAGGTTACGTCATGTAGCCAAAATATGCTTAGATTATGGACAACGAGTTCAAAATTCCGTTTTTGAATGTAAAGTTAATTCGATGCAATTAGAGTTGATGAAAGAAAGACTACTAGACGAAATCGATGATAGCCAAGATAGTTTGTATTTTTTTAATTTAGGGAAGAATTATAAAAATAGAATTAAGTCATATGGAATTAAAGAGGTTATAAATTTAGAATCGCCTGTAATATTTTGATATCGGTGCGAACTGTATGTGAACATGCTTTTAGGGAAGATTCGCACCAATTTTAAACAGGTGAAAAGTGATCTTTTGATAAAAAATATATTTTTATCAGGGTAAGTTAATTTGAAGCCCAATATTTAGAAATGAATTGAAATCATGATCTAAATATTGCG
# Right flank :  TTTAGGTCCATTGCGCTCTTGCCAGTGAAGTCGTGTCGCACTCCTTGTGATGCACTTGTGGGTGTATTAGTCGGCTTCTTCAACCCAGGCTTGAAGTACTAATTATTAAGAGGAGATTATTCAGATGACAATCGAAGAGATGCAAAAAGGCTATCAAAATGAAGTTGCTTATCAAAAACATATGCTTCGCAATCTAGGCTATTGATTCCAACTCTTTTTAACAGTTAGTGCGATTGGTTTGGTTTTAATTTACTATTTCCATCAATCAACTATGTGGCTCTTTATAATCGGAATTATTCTGATGGTCGCCTGTGTTTTAGGAATGTTTGCTTTTGGCTATGCTTCTTGGCGCGGACGGCAGAATGTCACTCTGGTAATCGAAGACTATGAGAAAAAGATTGCAGAAATTAAAAAGTTAGATCAAAATGCTTCCGGAACGGAAAAGATCCGTTTCAAATGATTCTTATATGAATAAAACAATTTCCCCTTCTCTAGAAATT

# Questionable array : NO	 Score: 9.26
# 	Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         R Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     F [10,6] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-2.50,-3.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: R [48.3-73.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,9.64   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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