Array 1 19196-19421 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCPM010000003.1 Anaerostipes caccae strain DFI.1.218 FJKAAPDD_3, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 19196 30 100.0 36 .............................. TCTGTAATTTCCCGGATCGTCACATTGTCAAAGACC 19262 30 100.0 34 .............................. TCAGTAGTCGCAGTAAATTTAGAAATCTGTATAC 19326 30 100.0 36 .............................. TTTGCAAGTCTTCTTGTGCCTTCATCCCGAGATAAT 19392 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ==================================== ================== 4 30 100.0 36 GATAAATAAAAACAAGAGTTGTATATTTAC # Left flank : GGCTTTGGGCTGATTTATGTGATTCATCACATTGAAAAACAAAAGATTTATTATGAATTTGGAAAAGAACACTGCTTTTTTGTGGTTGTGACATAAGTGAGGAGGAAAAAGAAATGCTGCCGAATGATCCGGTGATACTGTTAAGCTACATCAATACACAGCTGAGGGACTATTATGACAGTTTCGAGGAACTTTGCAAGAGTCTGTGTGTAGACTCAGGAGAGATCAGTACAAAACTTTCGGGTATCGGTTATGAATATCATCCTGAGACAAATCAATTCAGATAGTGGAAAATAAGGGCTGCCGGATGGTCGGCTTATATTGTGTTTCCCAACCTCAAAAAGAGACGAAATGCCGGGAGACCGCTTAAAATGGCGGTTGGCAGCCGATTCGAAAGAAAATGCCGGAAGAACAGAAACGGTTGGGAAAAATTCAGAGAAACGTTGAATTTATCAGGGAAAATGACTATAATAAAAATAAGGAATGGCAGAAATACGTTG # Right flank : CAACAAATGTAAAATACGAAAAGGCATTGAGCTTCTTTAATTTCACAAGAAACTCAATGCCTAAATTTTTACTTTTTCATATCCTATTGATTCGATACATTTATAAAAACTGCTCAACAAACTCAACCGGAAGCATCGTTCGCTCCGCAGTTTCTTCTGCGGAGAGCCCCTGTGACAAGAAACGTTTTGCAACACTTTCCATGCTCTCTGCCACTTCTACGATATATTTGTCATAATCATAAAACCGCATAACACGCTGGCCCCATGGATATTCTTTGATTCCATGGAGAAATTCAATCCCTTCCAGAGCTTTCAGCTTATCTTCCCAGGCGTCCAAATCTTCCACTTCAAAATAAAGCTGAAAATTATCAGGTTTCTCCTGAGGCTCCAGTTTCACTCCGACCAATTCTTCGTAGTTAGACTGCAGAGACAGGCCATTTTGAAAAGAAACATGAACCCCCAGATCCATCTCTACCGTTTGTTCCATTACCTTCTCATAA # Questionable array : NO Score: 2.86 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATAAATAAAAACAAGAGTTGTATATTTAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [70.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 2 123102-123396 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCPM010000003.1 Anaerostipes caccae strain DFI.1.218 FJKAAPDD_3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ==================================== ================== 123102 31 100.0 36 ............................... TTTTACCATGCACCTGCCTGAAATGCAAGGAGCCGA 123169 31 100.0 35 ............................... GCCGATAGCATGGATGGAGATGCCGGAGCCGTATA 123235 31 100.0 34 ............................... ATCTGATACTGTGTTACATTACTAACTTTGTTCC 123300 31 93.5 35 A................A............. TGGGTAGTGTGCTGGTCTATGGCAGCAAAGTTCTC 123366 31 74.2 0 A........GT.....AA.........T.TA | ========== ====== ====== ====== =============================== ==================================== ================== 5 31 93.5 35 GGATAAACATCAACAAGCGTTGTATTGAAAT # Left flank : TCTGCTGGTGAGGCCGTACAGGGAAAGCAAGAAGTTAAAGGTTGATTTGAAAGAGGTAACAGGAACAAGATAATATTGGAAATAGAGAGGTCTGCACCTGGTGTGCAGACCTGCATGATAAAGGAGGTTTCTATGGGAACAATAGCAGTAGGTTTGGCTGTCCTTGGTATTGTCAGTTTGATCGTCAGAAGCATGGTAAAGGATAAGAGACAGGGAAAGTCGATCCAGTGCGGGAATGACTGCAAACATTGCGGCGGGCACTGCGGTCATTGAGAAATGGAGAGTTGTCTCAGCTGACTACATTGAGGCTGGCTGATAATGATTGGATTTCCCAACCACAAATATTTAAATAGAATGGCAGAACCGCAGAAAATGGTGGTTTACAGGCGATTTGAAAGAAAAAACAGAAAATATGAAGGTGGTTGGGAAAAAACAAAGGAAACGTTGATTTTATCAGGGAAACTGGCTATAATAAAAAATAGAAATGGCTTAAAAACGAG # Right flank : AAAGATCTTCTTTCTATGTCCAGGAGACAGAAATTATAATTTCTGCCTTCTATTTTTTTGCCTTCTGTCTGCTGAACCACACCAGTCCACAAGCTGCCGTTTTTATGTTATGATAAAAGAGCAAAACACAAAGGAGGAGCTATGAGATTTGGTTACGATATCCCGGATTCTTTTTGGAGCCTGTTCCGTTCTGTAAACCGGGATCATTACATAGAAGCGCTGCTGAAAATCAGTGAAGAATATGAATATAACAACTACTTTCTGAGCCGGGAGGTCTGTATTCAGGTCCTGAGCGACTGGAATGCGGACAAGCGCATCTGGCTCCAGCGGGAAGAGTTTGAATCAGAACTGGATGTACTGGAGACTCCCCCAAACCGGATACTAAACTGGCTGATTAAGACCGGCTGGCTGAAAAAACTGGATGACTTTTCTACGCTGACATCCAACATTGTCATTCCCGATTACGCGGCCGTTTTTCTCGATGCTTTTGAACAGCTCGT # Questionable array : NO Score: 5.74 # Score Detail : 1:0, 2:0, 3:3, 4:0.68, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGATAAACATCAACAAGCGTTGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.74%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.80,-2.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : NA // Array 1 869731-868440 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCPM010000001.1 Anaerostipes caccae strain DFI.1.218 FJKAAPDD_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 869730 32 100.0 34 ................................ TTACCGACTGCTTACTGGGTAAACGGAGATACAG 869664 32 100.0 35 ................................ CTCTTGGAATGGCTTTAGGAATTGAGAAAAACGCC 869597 32 100.0 34 ................................ GTGTAAAATTTATGTTCGCACTCCAGACATTTTC 869531 32 100.0 34 ................................ TTTAAGACGGTGTGACATATCCTCAAAATACAGT 869465 32 100.0 35 ................................ TGTTTATACCAGGAGTAAATATCATTACTTTGCTT 869398 32 100.0 35 ................................ AGGTCGGGTTTGGTGATGTCGCAAAAACATACACC 869331 32 100.0 34 ................................ ATAAGAGAAGACTTAGGATTATCTCAAGCAGGCC 869265 32 100.0 34 ................................ GTAAAATCTCCTGTCCAGGCTAAAATGTCTTGGT 869199 32 100.0 35 ................................ GCCACTGTTGCGAAAGAGGCAGACGTAGACGAATA 869132 32 100.0 34 ................................ CTGTCAATACAAAGGATTTAATACAGATCCATGG 869066 32 100.0 34 ................................ GTGCACATCGTTAGCAATACTTTGTCTTTACTAC 869000 32 100.0 34 ................................ TCCGCTATAGAAAAGGAGGCAAGTATGCAGAAAG 868934 32 100.0 34 ................................ AGATCTGGCGATAAACCGGACGGACGACATAGGC 868868 32 100.0 34 ................................ ATAGATATTTTGTTTAAACCGGTCTGTTGTGATA 868802 32 100.0 33 ................................ CTTAGAGATATCTTTCATTGTTGCTCCCCGCAC 868737 32 100.0 35 ................................ TACATATTTAATAATATTACCAGGCTGCATATCTA 868670 32 100.0 34 ................................ ACCGTGGGAAAAGAAAACACGGTCAAGGGCTTAG 868604 32 100.0 34 ................................ AAAAAAACAGGATGCCTATAAAAATGCTGTAGAG 868538 32 100.0 35 ................................ ATTAATATCACGACTGAAGGATTTGTCAGAGAAGG 868471 32 78.1 0 ......T...A..A.....AA..C....G... | ========== ====== ====== ====== ================================ =================================== ================== 20 32 98.9 34 GTCGTTCCCCTCGTGGGAACGTGGATTGAAAT # Left flank : TGCATATCCGCCTTTTTTATGGAAGTGAGGTAGCAAACGTGTTAGTGTTAATTACTTATGATGTAAATACAGAAACATCTGCGGGAAAGACAAGGCTTCGGAAGGTCGCTAAGCAGTGTGTGAATTATGGGAGACGTGTACAGAATTCGGTATTTGAATGTATACTTGACAATGCCCAAAGCGTGCTGCTAAAGTCTATGCTTACAGATATCATAGATGAGGAAGTAGATAGTTTACGGTTTTACTACTTGGGAAATAATTACAAAACGAAAGTAGAACATGTAGGTGTAAACCGTGGAATTGCAGCGGATGAGACATTAATCTTATAGTGCGAATTGGAAGTGAACACGAAAACCCAGGGAGGCTCGCACCAAAAAAGTTGCACAAAAACAGTATAAATGAAAAGAAAAGTTATCGGTTTATGAATTGAAGATTAGTTGTGGTTAGCGAAATGATACAAATTAAATATATATGTGGAGGTATTTTTGTTGAATTTTGCT # Right flank : TCATACCAGAATGAATAAGTGATGAAGAATAAGACTTTTCATTTTGATATAAAAGGAAGCATATTCAATGGGGATTAAAGGAATCATGCAGGCCAGACATATTCTATTACTTGCGTCAGGAAAACAGAAAGCCCAGGCTCTGTATGAGGCTGTTTACGGTGATATCACACCGGAAGTCCCGGCATCTATCCTTAAATTACATCCCCATGCTGCCGTATTCGCGGAGGAGGCTCTCTCTGTGATCAAAGAAAAATCTTGAAAATAAAATAGTTTGTTGTTCCTTTGTTGACATTCTTCATGTAAGATAAACCAGAGGTGATAACAATGAACTATAAGATTTTACTCGTCGACGATGACAAAGATTTATTACAGATGCTCCGTAGCTATTTTGAACTGAAGGGCTATCTCATAAAAACAGCGGTCAACGGACTGGAAGCTATGGAGCGGATAAAGGATGCCCCGGATATTATCCTGCTGGATGTCAACATGCCGGGGCTTGA # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTTCCCCTCGTGGGAACGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-5.40,-5.40] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : NA // Array 1 224844-224614 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCPM010000002.1 Anaerostipes caccae strain DFI.1.218 FJKAAPDD_2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 224843 30 100.0 37 .............................. CACATGAATTTCGGTCGTGCACATAAATTACGGCACC 224776 30 96.7 37 .....................C........ GAAGAAACTGTTGTTCCGGTAGAAGAATTTAATCTTA 224709 30 100.0 36 .............................. TGATGAATTACTACACCTCCAATAATACTTGATTCC 224643 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 4 30 99.2 37 GATAAACAAAAACAAGAGTTGTATTGAAAT # Left flank : AAAAGCCAGGCGGTGGTTTTGATTGGGGTGACTTATCAGCAAAGAGGACTGAATGAGTGCTGTGGTTGGTGTAATCAGACAAACTGCCAGGGCTGCAGGGAGAACCAGAGCGTCTGTGTATTTGATCCGGTGGATCTGGGAATCGCATTGGGATCGGCAGTCAGTGTGGCATCCTTAAACCACGTGGACAATCGGATCATGTTTTCTGTTGGAAAAGGAGCACTATCCTTGGGGATGCTGGGACCGGAAGTGAAGATAATCCTTGGAATTCCGTTGGCTGCTGCGGGAAAAGCGCCATATTTTGACCGTAAATAACGGTGTAGTTTTCCCAACCGGCTAAATTTAAAAAGTGGTCCAAAACGTTGATTTTACAGGGGCTGCAGAGGATTTTTAGGATTAGTTTTGAAAATGGACGGCCGGTTGGGAAAAAAGCTGGAAAACGTTGAATATATCTAGGTTTAGAGATATAATGGAAACTGAAGAATGGCTTAAAAACGTTG # Right flank : ACACTTACCTCCTCTTTTGTCAAAGGACGTCCACAGATAAATAAAAATAAAATGAATAATAGATTGCTTATCTTAATTTGAATTGTTTGAAAGTACTATGAAATGTTGTATTATTTTGAAAAATATAGTAAAATAGAACAATAGAGTGGTTTGTGTATAAAAGCTACTAATGAATCATTCCCTCCAGGGCAGTCGTTACGATAGGTACTATCAGCATGTATACGATACGAGGGTGCATACAAAAGAAAGGGGTGGGGCAGTGGATTTACAAGTTTTTGAAATCCGGCTAAAAGTATATCTGTTAGAAGATATCCCTGTAGAAGCAGTTCAAAAGAAGACAGCCGCACTGATTGACATTTGTCTGAGCAGAGACGAAGCACTTCTGAAATTTCATGAGACGAATCAATTTAAGAATTATTCTTTCGGAAATCCATATCCATTGGAAAAGGACAAAATTTATAAAAAGGATAAGGTGTATGTCATAACAATCCGCACCATTG # Questionable array : NO Score: 5.82 # Score Detail : 1:0, 2:0, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATAAACAAAAACAAGAGTTGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.5 Confidence: HIGH] # Array family : NA //