Array 1 90830-92137 **** Predicted by CRISPRDetect 2.4 *** >NZ_AQXD01000005.1 Wohlfahrtiimonas chitiniclastica DSM 18708 B143DRAFT_scaffold_4.5_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ============================================================================================================================================================================== ================== 90830 27 75.0 174 .......ATG...A.C...-....T... GGTTGTGCGGTTGCAGGCGCGATTGAGCATGCGGATACTTAAGACCTTTATGGACTAATCTTTAAAAATTTGGATAAATATCAGTGAATTACATGTTATTGGGAAAAGATTGGTTTTATGGTCAAATATCAACAAAACCATAATGATTCCAATGGCATTGTGATAGTTTTTACT T [90834] 91032 28 96.4 32 .............T.............. GTCTGCACGTTCGGGTGTGGCGGTCACACCAA 91092 28 96.4 32 .............T.............. AAGTGTTGTTTCAGTACGCTCGATAAGTGTTG 91152 28 96.4 32 .............T.............. GATAGCGATAAACATAAAAAAACGGGTCTAGT 91212 28 96.4 32 .............T.............. AAAGGATTATGGTTCACGCGCTCAGTGATTCC 91272 28 96.4 32 .............T.............. AGATGGACAAAATGATCATTTTGATCGAATCC 91332 28 96.4 32 .............T.............. TACTTTTACCGATGTAATAAGTCCTGCCGTTA 91392 28 96.4 32 .............T.............. ATGCCCGCAAAGATAGTCTTTTCAAACTTATC 91452 28 100.0 32 ............................ GGCAATGGCACAAACAACTGACGCGATTATCA 91512 28 100.0 32 ............................ TAACGTACATGACCGCATGGTCATAGCTTTTT 91572 28 100.0 32 ............................ CGCATTATCTTTTATCACAACATCCTTAGCCA 91632 28 100.0 32 ............................ TAGAATATTCGCGTAGACCGTCATTGTGTTCT 91692 28 100.0 32 ............................ CTGTGGCTTTCCAACATTCCCCACTCTAACCA 91752 28 100.0 32 ............................ TGACTCCAATTTGATCTCCGCGATCTTTATCA 91812 28 100.0 31 ............................ AAAAACATAAAAAAAAAGGCGCTTACAAATC 91871 28 100.0 31 ............................ AAAAACATAAAAAAAAAGGCGCTTACAAATC 91930 28 100.0 32 ............................ AAACAAAGAAGCCATTGATCAAACTTATGTTT 91990 28 100.0 32 ............................ AAACAAAGAAGCCATTGATCAAACTTATGTTT 92050 28 100.0 32 ............................ GTGACGAACGGACGCTGAAGAGTAGCTGAATA 92110 28 92.9 0 .............T.............T | ========== ====== ====== ====== ============================ ============================================================================================================================================================================== ================== 20 28 97.1 39 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : TACAAAAAATTTCTGTGCGTATCGTCAATGAAGTTAAACACGTGAACCGCATTGTGTATGACATCACAAGTAAGCCACCTGCAACGGTGGAGTGGGAATAATTTAGTTTCCACGCATTGACATGAACATAAAAAATGGCCTAAATAAATATTAGGCCATTTTTTTAATGATTTTTAGGAGAGTTGAATGAAAAAATTATGGATGATTACAACCATTATGGCAGTTTTAACAGGTTGTGCTTCTGTTGAGCAAGATACCGTGGTGCATGATTTTACTGCATATGGCAAGCTCAATGAGCCATGGCGCATTGTGGTCAAACATGATGATCAGTTAGAGATTGAAGGGGTAATGGTTCGCGAGGGCACATTGAAAGTGACGCGATCGGCATATGCAAAAGGTGTTGAATTCTCAGGGGATTATGATGGGCAGCCATTGACATTAAACATCCGCTCATTGAAGTGCAAGGACAGTAATGGCGATGAAACAGACTTCACTGCCAC # Right flank : TTCATAAGACTCATCTAGTGCTTGAATATTGATTGTGTTACGATTTTAAGGATCACAAAAAAGAATCAAATAACAAT # Questionable array : NO Score: 5.33 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:-0.69, 8:1, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.24,0.68 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 816526-815476 **** Predicted by CRISPRDetect 2.4 *** >NZ_AQXD01000001.1 Wohlfahrtiimonas chitiniclastica DSM 18708 B143DRAFT_scaffold_0.1_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 816525 28 100.0 32 ............................ CCCCAACGGCGAAGCAATTCGCGAATCTGCAT 816465 28 100.0 33 ............................ ACGCCATGGAAGTTTTGGAACAATCGTTGCTAC 816404 28 100.0 32 ............................ ATGTGCAACCTGGTGCAGAACTTCACAATGGA 816344 28 100.0 32 ............................ GTATTGTGGTACACCAATCCCACCGCCTAAAG 816284 28 100.0 32 ............................ CACCGGTGATCGAAGGTGTGATTGTCCCTCAT 816224 28 100.0 33 ............................ ATCGGTCTCAACATTGCGCCCCACTGATGCAAT 816163 28 100.0 32 ............................ TGGCAATGAAGGTGCTATGTATGGTGACATTT 816103 28 100.0 32 ............................ TTTACAATGAGATTGGACTCAATGCCAATTTC 816043 28 100.0 32 ............................ CATGAGGTATTAAAAAATGAGTAATAAATTAA 815983 28 100.0 32 ............................ ACACCATTGTGCCATTGCGTTCTTCAACTCGT 815923 28 100.0 32 ............................ GTGAAGGATGGTAGATTGGTTCAGCACTTCAA 815863 28 100.0 32 ............................ TTTTTCAAGCAAACGCATTGTGGCGTCGTCAA 815803 28 100.0 32 ............................ TAAGTGGGAGCAACCCGAACCGCCTAAGTGGG 815743 28 100.0 32 ............................ TTTGGGTGCTAAGTAATGTTCGCATGTTCAAA 815683 28 100.0 32 ............................ AAACAGAACGAGCAATTACACGCACAGAACGA 815623 28 100.0 32 ............................ AGTATGGAAGCGGTTAGTGGCAATATTGAAAT 815563 28 100.0 32 ............................ TAACTCATGACGAACAATGCCGCGCTTATCTT 815503 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 18 28 100.0 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : TTGAATGCAGGTTTGTGGCTGTCACGCTTGACGGATTATGTGCACATCTCTTCCATTAAGCCGGTGCCTAATCGTGTGATGCATTATGCGATTTATCAACGTAAACAGGTCAAAAGCAGCATTGAGCGTTTAGCGCGCCGCTATGCTAAGCGTAAGCATGTGACATTTGAGGATGCCATGGCACATTTGAATGGCAAAACGCCAGAATATTGTGATTTGCCTTATGTTCAGATGAAAAGTGAAAGCACGGATCAACGTTTTCATTTATTGATCCATAAAGAGTGGGTGCCATCACCGACGGAGGCGGCAAACTTTACAACGTATGGTTTGAGTGATCATGAACAATTGTCTGCCGTTCCTGAATTTTAACCAATGTTTTTTGCTCTTTAAAAATTTGGATAAAAATCAGCGTCTTATAAAATAAGGAAAAATCATTGGTCTTTTCAGGTAAACTACCTGCGATCAGTGATTTTTCCTATCTTTTGTGCCGAAATTTTACT # Right flank : TGATTCTAATCATTTGAGAAAAAATTGCAGAAAAAATGATAAATGTTATAGTTTGCACGATTAGATGAAATACAAGCACAAAATATAATGTGCTAACAATCATCATATATATAGATAAAACAACATAATATATGAATACTAAGGAGAATATTATGCACATGCATTTGAGTAATGAAGATCTTGATGGCTTAATCGCTGAAATTACTGCATCACAAGAGTGGATAAAAATGGCGACACCATCGGTCAGCAATATGATAAGGCTGCATTAAATGACATTACTAAAAGTGTAAAAATGATCATTGGTCACTTTTTAAAAAGTGTAGGTACCACATTTGTTTGTGTTGAAAATTCATTCATCACATCCTTGCCAGTGTTTGCAGATGCCAATAGCAATACAGGTGGCAGCACACAATGGAATAATTCTGTGAACATTAAAATGTCCATCGATATGTATGACAATGGTGTGATGGACATTGGTATCAATGCAGAAATTGAAAATA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [75.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.24 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 941036-940590 **** Predicted by CRISPRDetect 2.4 *** >NZ_AQXD01000001.1 Wohlfahrtiimonas chitiniclastica DSM 18708 B143DRAFT_scaffold_0.1_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 941035 28 100.0 32 ............................ CTGTGGCTTTCCAACATTCCCCACTCTAACCA 940975 28 100.0 32 ............................ TGACTCCAATTTGATCTCCGCGATCTTTATCA 940915 28 100.0 31 ............................ AAAAACATAAAAAAAAAGGCGCTTACAAATC 940856 28 100.0 31 ............................ AAAAACATAAAAAAAAAGGCGCTTACAAATC 940797 28 100.0 32 ............................ AAACAAAGAAGCCATTGATCAAACTTATGTTT 940737 28 100.0 32 ............................ AAACAAAGAAGCCATTGATCAAACTTATGTTT 940677 28 100.0 32 ............................ GTGACGAACGGACGCTGAAGAGTAGCTGAATA 940617 28 92.9 0 .............T.............T | ========== ====== ====== ====== ============================ ================================ ================== 8 28 99.1 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : CGCGTAGACCGTCATTGTGTTC # Right flank : TTCATAAGACTCATCTAGTGCTTGAATATTGATTGTGTTACGATTTTAAGGATCACAAAAAAGAATCAAATAACAATAGGAAAAATAATGATGAAAAAAAAGATTTTATTAGGATTGGTATTCGGGGCGTTTTCCATTGGGCAAGCAAATGAGTTAATCATTGCATCAGCGATGATTGAGGCGAATGATTATTGTCAGCAAAAAGGTAAAAATGCATATTATAACGATCGTGGACATTGGAAGTATATCGACAAACGTGCTTATATCGAAGCCTTAAACCATTATATTTATACCGCAGAATTAAATTTATTGATGTCAGGTACGCCATTAGATAAGCCAGAGTTAATGCGAGAATTGAAGATTTTAGGTCCTCAACAATTTAAATCCATGCAAAAAAAGAATATGATTAAGTGCCAATAGTTGTGCATTCATATAATTAGGAAGGGAATAATGATAAATTTTTTACGAAACATCAATGAAAATATAAAAAAGATGTCGGA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-18.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //