Array 1 308480-302617 **** Predicted by CRISPRDetect 2.4 *** >NZ_QRLI01000003.1 Bifidobacterium adolescentis strain AM13-11 AM13-11.Scaf3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 308479 36 100.0 40 .................................... TGCGGCAAATCGGCTACACGGGGGTGTCGAAAACCGATAA 308403 36 100.0 35 .................................... AAAGTGCATCTTGACGCGGTGCCTAGCGACCAAAC 308332 36 100.0 34 .................................... GCCAGGCTGTTGCAGCAACGCAATCATGCCGCTT 308262 36 100.0 35 .................................... TAAAGCGTGCCGTTATCACGATCAAGGACGCTCAA 308191 36 100.0 35 .................................... TGGACGTATGGATGACGTCAACGTGCTTAATGAGA 308120 36 100.0 36 .................................... TCCCGAAGGCACTGTGTTTACCGTGAATCCTATGGG 308048 36 100.0 38 .................................... GCAACACCTGCTACATGCAACTCGAACTGCAACGCGCA 307974 36 100.0 36 .................................... AAATATTTATGTCGCCAAAATGGTTGACAGAAAAAC 307902 36 100.0 36 .................................... CAACTCACTGCGAGACTTGGCCGCCAATACAACGGA 307830 36 100.0 35 .................................... GGAATACGGCTTTACTGTCGGCACCACGGTAGACT 307759 36 100.0 36 .................................... TTGTCGATGTCGAATCCGGCCGCGTCGGCGGTGCTG 307687 36 100.0 35 .................................... GAGCGAACACGTGAACTGCCAGATCTGCGGGGCCG 307616 36 100.0 36 .................................... GTGAAGCAGTTGGAACGGAGTATGTGACATGGCGCA 307544 36 100.0 37 .................................... AGGCCAGTATAAACGTCTTCATAAGCTAAAGCGAATT 307471 36 100.0 37 .................................... AATACGTGGTATGAAGATTCCAGACGATTACGCTAGC 307398 36 100.0 35 .................................... GCCATCCAAGTCGGCGAACACGACGCCAGACTCGT 307327 36 100.0 36 .................................... TCGATCAGGGAATCGAAGCCGTTCGTCCGCAGGGAC 307255 36 100.0 36 .................................... GCGTATTCCGTTCCCCGCGTCTCGACGGATACCCTG 307183 36 100.0 33 .................................... CGAACAGATACTGATGGAAATTCAATGGAACAC 307114 36 100.0 35 .................................... TTGATATCATTCAGAGCGATTGAGCAGGATAGTCC 307043 36 100.0 35 .................................... TGCTTGTATTCCTATTGTGTAGTCTACTGTTACTA 306972 36 100.0 39 .................................... CAATCTCCAAACATTCTGTCAAACCAAACCTAAAAACCA 306897 36 100.0 36 .................................... GCTCCCGACAACAGTCGCAAGCGAACTAATATCCAT 306825 36 100.0 35 .................................... TGAAAGAATGAACGACGATGACAACGCAGAATGAC 306754 36 100.0 34 .................................... GGACGGTCCATTCGCTGACACCGAGCAGAGCGGC 306684 36 100.0 37 .................................... AGTGTGCCGGGGATGGTGGCGAGGTTCTGGTAGATGG 306611 36 100.0 34 .................................... TGATAAGACGCACAAATGGGAAACTAAATCGGAC 306541 36 100.0 37 .................................... CGCAATGAGTTTCATACGGCGGTTCCGCAGTCTTTGA 306468 36 100.0 34 .................................... GAGGACGGCGACATCGACGACCCGGCCAAGCTGC 306398 36 100.0 34 .................................... GATACCGTAGTGCGCGCTAGCCTGACTGGACGAA 306328 36 100.0 38 .................................... GTCGACCATGATCATAGCTTCAACAAACTTCTGAAAGA 306254 36 100.0 34 .................................... GACAAATTCCCACAACTTGAGGCCGAAACCAAAA 306184 36 100.0 36 .................................... GGGTTTTCGCTTGTATATTGCGGGAAGTCGCATTCC 306112 36 100.0 34 .................................... TTGCACATTTTTCCTGCTCCTGTTTCTCTTGCTC 306042 36 100.0 34 .................................... TGGCGATCATGTCCGCCAAAGCGGGCGTCAAAGT 305972 36 100.0 35 .................................... CGCGGGCCATGCGGCCGTCCCGTCATCGTAGTGAG 305901 36 100.0 35 .................................... ACGAGCAGTACCACAACGTTTTCGACTACAATGTT 305830 36 100.0 35 .................................... CTAAAATACACAGGAGAACAAACAGAAACATTCAT 305759 36 100.0 36 .................................... TGACCGCGAAACGCAAGCGCGTGCGGCGTGCGATAA 305687 36 100.0 34 .................................... AGTAGATTGTATTCGAGGAACCATGCGTCGCAAG 305617 36 100.0 38 .................................... GATGAAATCACGCTAGCCGCACGAATCAACACGGCCAT 305543 36 100.0 35 .................................... TCACCCCAGTTGGCGAACTTCAGGATCTTCCAGAC 305472 36 100.0 38 .................................... AACCTCAAGCTGCAGGAGGAGATTCAGCTCCTGTCCGG 305398 36 100.0 34 .................................... TATACCACACTTTAGAATGCTGGCGGATTAGATT 305328 36 100.0 39 .................................... ACAAGCGAAAACCCATACAAGGAGTAGGCAAATGAAGAA 305253 36 100.0 38 .................................... TTCGATGCCGAAATTCAGGAAGTGAAAGTGGAGAAGAA 305179 36 100.0 35 .................................... CCAACGGCAGCCGCTACCGCGTCATCGCCGGACAC 305108 36 100.0 36 .................................... AAATCAGTTTGGCCGTGGCATGAGGTCGCCGTACAG 305036 36 100.0 35 .................................... CAAACATGCTGCCGATGATCGGCACGCCACTCAAT 304965 36 100.0 38 .................................... TACCGCGTACATGTATCCGATTGACGCAGAACCCGAGA 304891 36 100.0 36 .................................... TCGCATTCCCAGCAATCGCCACCTTCATCGGCGTAA 304819 36 100.0 37 .................................... GAACGGCGAGGAGGCGATCATCACCCGCTCGAAGGCG 304746 36 100.0 34 .................................... GAAAACCGCGACGAACGCTGAAGAATAGTCTGAA 304676 36 100.0 36 .................................... AAGCTCAATCCCCTCTCACTGTCCAAGCTGGAGAAG 304604 36 100.0 37 .................................... ACGACACGATACAATCAGGCGTATTCATTATTGAGTG 304531 36 100.0 35 .................................... GTGGCCATCGACATCGAGACCACAGGATTAGACAG 304460 36 100.0 35 .................................... GGGTGGAGGACCCTCTGGCACGATGCCAGCGGCAA 304389 36 97.2 37 ...................C................ GCGTCCGGCTCTGGCACGGACAAGGCGCAGCTCTGCC 304316 36 100.0 35 .................................... TTCGTCACCGGCTGTGGCTATGACGTGCTCAGCAG 304245 36 97.2 35 ...................C................ TTCGTCACCGGCTGTGGCTATGACGTGCTCAGCAG 304174 36 97.2 35 ...................C................ TTCGTCACCGGCTGTGGCTATGACGTGCTCAGCAG 304103 36 97.2 38 ...................C................ AGGAGGTTGAACTTCGGTATCAACACCAGTCAAGCGGA 304029 36 97.2 35 ...................C................ AAGGCCGGCGGCGGTCTTTCCTGCGATTGGGACAA 303958 36 97.2 36 ...................C................ CAGGACTACGCCCGCACGATCCTCAAACCGGTTGAC 303886 36 97.2 37 ...................C................ GAGCGAAAACCCATACAAGGAGACTGTCAAAATCGAA 303813 36 97.2 35 ...................C................ ACCATCGGCTTGACGCCACAGGGGCTTCGTTTGAA 303742 36 97.2 38 ...................C................ CGCGCCAACCAGCACGGCCAGAGCGTTCAACGTGGTCA 303668 36 97.2 35 ...................C................ AGCACCCACATGGCCATTAGCCACACCGCGAAGAT 303597 36 97.2 40 ...................C................ GCTCGCCGAGCTGTCGGGTCTTGGCGAAATGCTGCGAGAG 303521 36 97.2 37 ...................C................ ATTCCGGACGGCCACAGACCTCCGTGGTCGTGGCAAA 303448 36 97.2 37 ...................C................ TAACGACACATGCAAAGCGGCCGACTTCATTGGCGTG 303375 36 97.2 37 ...................C................ AGGCAGATGATCACGTCGGCCATTTCCTCCGCAAGAT 303302 36 97.2 33 ...................C................ AACAAGCTTGTCGCCAAAATGGCTTCGACCAAT 303233 36 97.2 37 ...................C................ AAGAGCGCAAATGTGACAATCGTAGGGCACTGTCACC 303160 36 97.2 39 ...................C................ AATGGGCAATGTCGGCATATGATGCTTTCCCTTGGCCGA 303085 36 97.2 36 ...................C................ AGCATGAAATCGCTGGATTGAAGACTTCGATCGGCA 303013 36 94.4 37 .G.................C................ GCACCGTATGCACTTCCCTTAAAAGGAAAAAGGCGAA 302940 36 97.2 37 ...................C................ ATAGACCACAGAGACGTGAGCGACGACGGCCAGGCAC 302867 36 97.2 36 ...................C................ GTGGCCTGAGCCGTGACCTTAAGAGTGTCGGCGGTT 302795 36 97.2 36 ...................C................ TTGCGTACGAAAACGGCGTACGCTCGGCTAATGTCA 302723 36 94.4 35 ...................C..A............. CCCGGCGACATGCCAAGCGAAGTGCCGAACTAAAG 302652 36 86.1 0 .........T......A..CG...T........... | ========== ====== ====== ====== ==================================== ======================================== ================== 82 36 99.0 36 ATTCCTGAGCATTCAAGCTTAGGACTTCATTGAGGA # Left flank : ATCTGGTGGCATATGATATCAGCGATGATTGCTGCCGCTCACATGTTGCGAAAATTCTTCAACACTATGGAGAACGATTGCAATATAGCATCTTCTTACTGCGGGTACGTCCTTCGATGATGTTGGATGTCCGTATGCAGATAGAGAGGGAAATAGATGACTCAATCGATTCTGTTGTGTTCTGTTCTCTTGGAACCATTTCTCAAACGGAAGAGGGCTTGGATTTCTTGGGGCGCCGTGGATACGTCGATTTAGAGATACCGACAGTGATTTGAAGTTTTAGCCTAATGGTGATGTTGTTTGATAAGTAAAGAGTGTTTTGCTGTTTTTCAAGTGCGAGAGATGCATCATTGCTGCGACACACGGTGAGCGCTCGCACTTGAAAAATAGTTGTTTTGGAGCCAGTGAACTTATATTGCTTCTGTATTGCGATAGAAATGAAAGAGTCGCTCGCAAAAGCCTTTAGAATATGTGTCATTGCAAGGTCTTAGCCTATGACT # Right flank : GCTGTGGGCGAAGAAGCGCAACCGTCTCCAGTTTTTTGGATTAAAGCCAATATTCAGAGGTCTATCCAAAATCGCTGGATGATACTGTCTTCGTTCCGTCCCGTACCGTTCACGATTTCATTCTCCATCTTTCCACCATTGCTGATAATCGTCCGTCTTGATGCTTCATTGCTCTTGTGACAGGTAAGTAGAACACGTTGCTCGCCCTGCTCTTTGCAGATGGGCAGGAGTAAGGCGAGCATCGCTTTGGCATACCCTTTTTGACGTTCCGATGGCAAAATGCTATACCCAATATTTCCTCCGTATTGCAGCAGAAAAGGGGATAGCGGACGTCTGAAATCAATGATGCCGACGAGCTTGTCATGCCTTCCGAATAGCTAAAAATACTTCCGACGGCACATAGCCTTCGCCGTATTTCTTTTTCAATCGATTATCGAAATCGATCCATTCATCAAAAGAATCCGTGTCTTCGAGACCGGCGCATCCATCGAGACTGTCGT # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTCCTGAGCATTCAAGCTTAGGACTTCATTGAGGA # Alternate repeat : ATTCCTGAGCATTCAAGCTCAGGACTTCATTGAGGA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.40,-4.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //