Array 1 108439-107391 **** Predicted by CRISPRDetect 2.4 *** >NZ_FRSH01000059.1 Pseudomonas aeruginosa isolate 387, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 108438 28 100.0 32 ............................ AGGTCGAAACGAAGGTGCTGATGGGTCGCCTT 108378 28 100.0 32 ............................ AATAATAATACTCAGCCCTAGCGCCCTGAGCA 108318 28 100.0 32 ............................ ATGTCGTGGCGGTCCTGCAGGCCCACGATTCC 108258 28 100.0 32 ............................ ACCGGGGTAGGCGCCGATGATCGCGCTGACCA 108198 28 100.0 32 ............................ GAACGCAACCAGTTCCGGACCTCGCTCGCCGA 108138 28 100.0 32 ............................ ATTCCAGCATCTGGGACGGCGATCGCGATTCG 108078 28 100.0 32 ............................ GCCATCGACCGCGAAGCCGCAGACGGCATTAC 108018 28 100.0 32 ............................ AATCCGTCCAGGCGGAGTACGCAACCACCGTC 107958 28 100.0 32 ............................ TGGTAGACGGGATATGGATCGGCGAAGTCCTC 107898 28 100.0 32 ............................ GATGACGAAAGAGCCACCGCCGCCCTCCACCG 107838 28 100.0 32 ............................ TCCCATAGACTTGCCGATCTCGGCTGCGGCGC 107778 28 100.0 32 ............................ TTGACCAGATCGCGGCGTGGGGTGGTCGGCTT 107718 28 100.0 32 ............................ TGCCCGCCATCAGCGAAACCGAACATGCTTGT 107658 28 100.0 32 ............................ AGTGGGCCGTCCCACTCAGTGAAGAACGCCCC 107598 28 100.0 32 ............................ TGGAGAAAAGCAATGCGAGTGGTGCGAGGCCA 107538 28 96.4 32 ....................T....... AGACAATCCGGACCTGCCGCCCAGGACGATCT 107478 28 100.0 32 ............................ TGCAGCGACTGCACCTTGGCTTGCTGCCGGTC 107418 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 18 28 99.8 32 GTTCACTGCCGTATAGGCAGCTAAGAAA # Left flank : CATGTGTCCGCGTAGCGCGACCCTGTACGTGGACACCCATGCACTCCCCACGCACTTGTTCGACAACGCGAAAGTGCGCTTGAGGTCGGCGATCAACATCCTGGCCATGACCCGTTTGCTCGATGAGAAAGAAGAGCCCGGCGGCACCCTGGCCTACATCAACGGTGCGTTGCTGTCGCTGCTCAGCGATGCCTTGTCCGAAATCGAGGCGGGCCACCCGAGCCTGTAGCGCCGCTCCCTGGCGCGACGCCCCCGGCCTGGCCGGGGGCTTTGCGGCATCGCCCATCACAAGACCTTTCGCGCCCGAACGGCGAGGCTCACCGCCCGTCCCGGTCCTCGCGAAACGGCCTCCAATTGCCCGAAACTTCCGACCCTTTTTTCGGACGATTTCTTACGCCCTTATAAATCAGCAAGTTACGAGACCTCGAAAAAAGAGGGTTTCTGGCAGGAAAAACTCGGTATTTCCTTTTCCTTCAAATGGTTATAGGTTTTCGGGGCTA # Right flank : CTCAAGAAAGAGCAGAACGGCCAGCCTGCGCCGTTCATTGCCGTGTAGTCCCGTAGGGCGAATGCCGCCATAGGCGGTATCCGCCCTACGGATCGGGTTCCTGGCATGCACGAAGTGAGGCTTGCCCTCCGAGTGGTGGGGCGGCAAACCCGCCCCGTCAGGAGGCCGAGCGGAATCGTTGCGGAGGGGGACGAGTGGCAGGATGCCGCGAGAGCCGCCTCGGTCCACGAAGGACCGTGGCGGCGTGCCGCCGGGAGCAACGATGCAGCGAGGGCACCCCAGCCGAGAAGCGGCTGGGGCCGGATGCCGGGGCGAGTCTTTTGGTTCCTTTTGGACGCTTGCAAAAGGAACTCGCCTGGGAAGGCGAAACAAGAGGTCAAGGCAGGCACAGAAAACAGCTTGACCACCAAACATGACGCCCGCTCAAGCGCTAAGCAACAGCGCCCCCCCTCACTGCCGTGTAGCTAAGAAATCGCGAGCGATATAGTCCCGTAGGGCGA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //