Array 1 269089-268517 **** Predicted by CRISPRDetect 2.4 *** >NZ_RAXU01000002.1 Acinetobacter guerrae strain WCHAc060096 2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 269088 28 100.0 32 ............................ ATCGACATTCTGGTCGTGACATTATCTTTATT 269028 28 100.0 32 ............................ AAGGCACCCATCTTAAGGCCAATAACTGAAAA 268968 28 100.0 32 ............................ AAAAAATCAAAGCTGAGGCTAGTGCAGAAAAA 268908 28 100.0 32 ............................ ATAAACCTGATTATTTGACGCAATACCGTTTT 268848 28 100.0 32 ............................ GTACGCACCGCAGGATACGGTTTTTTAATTTC 268788 28 100.0 32 ............................ TATGCCATATATTGCATTATGACTGTGCTGGC 268728 28 100.0 32 ............................ TCGATCGCGACAATCCGATGCTTGTGGTGTTG 268668 28 100.0 32 ............................ TCAAAAACAGGGGGATAACATGAAAAAATTAT 268608 28 96.4 32 C........................... TACAATAGATCAGATCCAGCAACAGATTCAGG GATA [268593] 268544 28 96.4 0 .......................C.... | ========== ====== ====== ====== ============================ ================================ ================== 10 28 99.3 32 GTTTGCTATCGCATAGATAGTTTAGAAG # Left flank : TTTCGCTTGGTAATAGTTTTGCATCTAAAATTTCAGCATCTGCAGCCCATTCAAGGGAGAGGGTTTGTAAAACCAATGCTGAACTTTCTGCAAAATAATCTTCGGTTCCCTGACCTAAATGAGCATCATATTGACGTAATGCAGACACACCAAAACGAATAAAATCACGAATCGTCGTTAAGTTTTCTGCTGCTTCCTGTAATTGTTCAGGGCTAATAGTCGGTCGCTCCACTTAGGGGTCTCCAAAAGATGATGATGCAAAACGGCTTATGATACCGTGTTTTTCCTTGCTTTATAATGCCTAAACGCATTATTGGTTTAATTTTCAAATGTGGCTGAATGTAGATTTGACATTTGAGTGGTTTTAACCCAATATTTTTATTATTCATTAAAAACAAAGTAAAATCATTAACTTGTACTCACTCTTTATTTGTTTAGTTAAACAAGCCAAGATTCGATTAAGTTTTTGTTATAAATTGATTTATTTCTGAAATTTTATA # Right flank : CACAGCTGTAGTAAATTAGTTAGAATGAGTCGGTTTCTATCGCATATTTATTTCTAAGATTCTGTCAAAATACTAATTACAACCATCAGAGCTTTTAAAGTTATGAAATCACATATTCAACGTGTAGAACTCGCAAAAGCCTATCGTTTGCTTAATCATGGCCCAACTGTTCTGGTTTCTGCTCAAAATAATCATGATATAGATGTCATGGCAGCCGCATGGGCCTGTGCTCTAGAATTTAGTCCCGCAAAAGTGACCGTCGTCCTAGATAAATCAACAAAAACACGACAAATCATTGAACAGAATGGCTATTTCGCATTACAAGTTCCTTGTTTTGCACAACTAAATATGACCTACCAATTAGGCAGTATCAGTCAGTTTGAAGCACCTAATAAATTAGAAATATGTGGAACACAACTCTTTTATCTAGATGATTTAAAAGTACCGTTAGTTGATGGGTGTATTGCTTGGCTAATATGCAAAGTGATTCCAGAACCACA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGCTATCGCATAGATAGTTTAGAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.29%AT] # Reference repeat match prediction: R [matched GTTTGCCATCGCATAGATGGTTTAGAAG with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.70,-4.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [68.3-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 146789-143881 **** Predicted by CRISPRDetect 2.4 *** >NZ_RAXU01000004.1 Acinetobacter guerrae strain WCHAc060096 4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 146788 28 100.0 32 ............................ ACGCTGTAACCAATAAAGAGCTTCCTTTTCAA 146728 28 100.0 32 ............................ AAGCATCCGAATCACCAAACGCATGTGTCTGA 146668 28 100.0 32 ............................ GTATAGAATCAACGGATCTGAAAAGATCCGTT 146608 28 100.0 32 ............................ TGATGTGGATGCAGCATCAAAATATCTAAGAG 146548 28 100.0 32 ............................ TACCTCACTATTCTTAATTAATGTTGCGATAC 146488 28 100.0 32 ............................ AAGCACTCAACCGATTGTGGTGCAACAAAATA 146428 28 100.0 32 ............................ TTATCAGTTATCAGCAAATGGTAATAACTTAA 146368 28 100.0 32 ............................ TAGAGCAATTGTAGTATCTTTAAGTGCTTGAA 146308 28 100.0 32 ............................ TGAAGACTGGCGCGATTGCGAACAAGGCTCAT 146248 28 100.0 32 ............................ ATTAAGTGAATTTATTTGAGAATTGAATGCAG 146188 28 100.0 32 ............................ AAGATATTCTTGACGAGCAAGCGCACCCTCAA 146128 28 100.0 32 ............................ CATTAGAGGCTTGCATGGTGCAACGTGTCCAC 146068 28 100.0 32 ............................ TGTTGAAGTAGTATAAGATGTACTAACAACTC 146008 28 100.0 32 ............................ CGAGAAAACAGGCTTTGAGATTGCATTATAAG 145948 28 100.0 32 ............................ CCGATCAAATCATTGTCTATTTCTATCGCTGA 145888 28 100.0 32 ............................ TTGAATGTTTCGAGTTCTTCGATCGGGATCTG 145828 28 100.0 32 ............................ AAAACTAGGGTTGCTTAAATCTGAATAGGCCC 145768 28 100.0 32 ............................ TAATTCAGCTATAAAGTCTATAAATCTCAAAT 145708 28 100.0 32 ............................ GAAAATAAGTGCAGTTATAACGACAAGGACTG 145648 28 100.0 32 ............................ ACCGTACGCACAACTAAATGAGTATTGAGAAT 145588 28 100.0 32 ............................ GTATTGAATTGCAAAATCAGCATTTGGAGTTA 145528 28 100.0 32 ............................ AGTAAAGGGGCGGTATATCCAAATGGCTGATA 145468 28 100.0 32 ............................ GCCCTGCCGCTCATTCAAATACCGCGTTAAAT 145408 28 100.0 32 ............................ TTTGGGATTCGTTGTTAAATCTTATACTGTTG 145348 28 100.0 32 ............................ AACTTCTTGTTTTCAGTCACCATATCACCACC 145288 28 100.0 32 ............................ TTTGTAAAGTCTTCAAATGAAAAATGAATATC 145228 28 100.0 32 ............................ AAGAGGACATTATGAGTATTAATATTGAAAAC 145168 28 100.0 32 ............................ AATAGAGTAAGAATTATACTTTTCATTTATAG 145108 28 100.0 32 ............................ AGTTGATATTTCGGGTAAAGCCGATATTACTT 145048 28 100.0 32 ............................ TGAAATTTTTGTGGTCAAAGGACATGGTTTAG 144988 28 100.0 32 ............................ TATGAACTGGGTCGGAATCGAAAATAAATCAG 144928 28 100.0 32 ............................ TCAACCTAAAATAAATAATATTTATCACTATT 144868 28 100.0 32 ............................ TAATTCAGCTATAAAGTCTATAAATCTCAAAT 144808 28 100.0 32 ............................ CATAGAATTGATAATCCTGACCACGTTTAGCG 144748 28 100.0 32 ............................ TCAAGTGGGGCAGGGTGTAAAGTTAGGCAGTA 144688 28 100.0 32 ............................ AAGCAGAAAAGGGCGTATGCATGATTCACCAA 144628 28 100.0 32 ............................ GAAGCGAAACCGCCATACGATAAAGGCTCGAC 144568 28 100.0 32 ............................ CTAAACAACTTCTTGCAACTTTCATCCAATCC 144508 28 100.0 32 ............................ ATATAAAACGTGGGAGGATTTAGGTATGGAAA 144448 28 100.0 32 ............................ CTTTGGAGTTACAATCCGATCCCACATTACAA 144388 28 100.0 32 ............................ AAGCGGATTAAGTAAACGTGTCTGATCGCTCA 144328 28 100.0 32 ............................ AGAAACAGGTGAGCAAACAGGCGGATCATCTA 144268 28 100.0 32 ............................ AAGTGCTGCTAAAGTTGGCCCATCAATGCTTA 144208 28 100.0 32 ............................ TAAACCACTAGAAAAAGCATTACCGCCTGCGC 144148 28 100.0 32 ............................ AGCCAAACTGTTGCTGACATTGTTTAATTGCA 144088 28 100.0 32 ............................ ATTCTGGATGACCGAACAGGAAAACTCAGGGA 144028 28 100.0 32 ............................ TCAACAAGTTGTAGATGCTGTAAGAGAAGAAT 143968 28 100.0 32 ............................ AGTACTCAACTTTGATGAGCCACTGGAGAAAG 143908 28 96.4 0 ....A....................... | ========== ====== ====== ====== ============================ ================================ ================== 49 28 99.9 32 GTTCGTCATCGCATAGATGATTTAGAAA # Left flank : ACGTTGGGCTAAATCACTCTATAAGGAATTAGCTAAAGGTTTTAGTCTAGAATTTACCCGTGAGGAAGGAAAAAATTCTCATGATAATGTGACCGATATTGCCAATAATTATTTAGATCATGGGAATTATATTGCTTATGGTTACGCAGCAGTTGCTTTAAATGGTATGGGAATTAGTTTTGCTTTGCCCATTTTACATGGTAAAACACGTCGTGGTGGTTTGGTTTTTGATGTTGCGGATTTGGTAAAAGATGCTTTTGTGATGCCTTTGGCTTTTTCATGTGCATCTAAAGGGCAAAATCAAAAAGAGTTTCGGATGCAATTAATTGAAACTTGTCAAGATAATGACCTTTTAGACTATATGTTTGGCTTCATTTCTGATCTATGCAATAAAATTAAATAAATTCAGATAGTTAATTAACTTCACACTTTTTGAAGTATTTTTACTCATTAAAAACTTATATAATTGATTTTAGGAGTTTTGTTTATACTTAACTCTA # Right flank : TCAGAGGAAAATATGTAATAACCTAGCAAACACATCAACTTTACTGGATAAAGATCAAAACAACTTGTTATGATTTAAATCACATTATTCAACAATAACGATTCCGATTTTGGAACGATACCTTTTTTGAGCAAATTTTATGGCAGCAGAAGCACATTCTCTTGGATTACTTAGTCCAGTTATTTTACTTGCTGCGGCAGTAATTGCCGTTCCAATATTTAAAAAATTGGGATTAGGCTCAGTCCTTGGCTATCTGGTTGCAGGTTTAATTATTGGTCCTTTTGGTTTTGCATTTATTCATGATCCTGCCTCTATTTTGCATATCGCCGAACTCGGCATTGTGATGTATCTCTTTATTATTGGAATGGAGATGCAGCCCTCACATTTATGGAACATGCGACGTGATATTTTTGGTTTAGGTACATTACAAATCACTTTTTGTACCATCGGGTTGACGAGCATTGGATTACTTTATGGATTCCCTTGGCAAATCGCTTTTA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.29%AT] # Reference repeat match prediction: R [matched GTTCGTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [70.0-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //