Array 1 731306-728815 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP021847.1 Pseudoalteromonas sp. A25 chromosome 2, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 731305 28 100.0 32 ............................ AGATAAACATCATCTAGATTCGCGTCAAGCTC 731245 28 100.0 32 ............................ TACTGCTGCGTATTTTGCATCTGCATCGGGTT 731185 28 100.0 32 ............................ TGCGGTGCCAAGTGCAAACATACGCTGTTCGA 731125 28 100.0 32 ............................ CGCAAGTGCCAGCATATCACCCGCAAGCGCGC 731065 28 100.0 32 ............................ TTAACCCAAGCTTTGCCGCTTTCTGATACTGT 731005 28 100.0 32 ............................ GAACGAGAACGTCAAGCATTTTTAACCCTGAC 730945 28 100.0 32 ............................ TGACTTACTCGTTGAATACCCCAATACCCGTG 730885 28 100.0 32 ............................ CTTCGGCCACGATTGCACCTACTGCAGCAATT 730825 28 100.0 32 ............................ GGTATAGATGAGAACAAGCAATTAGAGCAGGG 730765 28 100.0 32 ............................ TAAAAAAGTGCCTAACACACAAGTTTACACCC 730705 28 100.0 32 ............................ AGTCTACGCCTGTGTTCACATTGGGTTTTGGT 730645 28 100.0 31 ............................ TTCCGCAAAGCACACATTAACCAAGGCGCGA 730586 28 100.0 32 ............................ TGTTGTATTAGCTGCGTGTTTTGCTCTTGCAT 730526 28 100.0 32 ............................ TTTAGCTTGTTGCGTTCAGTTCTTGCCGCAGT 730466 28 100.0 32 ............................ GCCTGAGTCATTACCGCCTTGACACTGAACAG 730406 28 96.4 32 ...........T................ ATCCGAACATACTGTCGATAAGTGGGCCTAGA 730346 28 100.0 32 ............................ AGAATGTCCTTTTTTGCTCTTTGGTGTGACTG 730286 28 100.0 32 ............................ TAAATGCAATTCAACCATGCCTTGTGGTTCAT 730226 28 100.0 32 ............................ TAAACCAGAAGCAGATGCGAAATAAGCGGCAG 730166 28 100.0 32 ............................ TAACTACAGGATCGGCAAATCCGTTGATGAAG 730106 28 100.0 32 ............................ TGTTCGAAATACTATCTCTACGCAATGAAGTA 730046 28 100.0 32 ............................ ACAAAACCAATTTCTTCTCTGTAATCGTATAA 729986 28 100.0 32 ............................ ATTAGCAACCGAGTAAAAGAACGTTCTTCGTT 729926 28 100.0 32 ............................ CATCAGACCGTTCTACGCCCGAATTTACGTTG 729866 28 100.0 32 ............................ CGGTGGGTTATTGAGGTCGAATTTAATAAAGC 729806 28 100.0 32 ............................ ATACCCTTCGGCATAGGTGGCTTGTTGTTTTT 729746 28 100.0 32 ............................ TTCCACACTGGCGCTTTGATTGTGTAATCTTT 729686 28 100.0 32 ............................ TATAAAGAGTTGGGTTTAACCAGCAGCACCGC 729626 28 100.0 33 ............................ CTATAGCGAAAAGAGCGAAATTTTCGCTCTTTT 729565 28 100.0 32 ............................ GCAATTGCCACCCCGTACGCAAACGCCTTTAG 729505 28 100.0 32 ............................ CACAAGTGAAAGCCGCCGTTTTGTCGCACGAT 729445 28 100.0 32 ............................ ACGTACAAACACTGCATTGTATTCGGGTTGTA 729385 28 100.0 32 ............................ TAGTGGCTATGTCAGACAATGCAGACGAAGAC 729325 28 100.0 32 ............................ ACGCCTGCTGAGTTGGCCCGCCTTCTGCGTGT 729265 28 100.0 32 ............................ ACCTAGCCCGTTAAACGGCGATTTTTTACGGC 729205 28 100.0 32 ............................ AATAGGTTTTATTTGCAAGGGTACAGCGTTTT 729145 28 100.0 32 ............................ CTCCCGAGTAGGCAACGGCGCTATTTGGTCAA 729085 28 100.0 33 ............................ TAAATATATGTTCGTCATAGAAAAGTCCCTTTC 729024 28 100.0 33 ............................ ATGTACACGTAGCACATGTTTTTAGCTGTTGCT 728963 28 100.0 33 ............................ GTACGCAGCGAAGCAGGATTGCAGATACAATCA 728902 28 100.0 32 ............................ GATGAAGAGCCAACTGGTGATGACGGCAAATA 728842 28 96.4 0 .............T.............. | ========== ====== ====== ====== ============================ ================================= ================== 42 28 99.8 32 GTTCACCGCCACACAGGCGGCTCAGAAA # Left flank : GAATACGCCTATTTCAAACGTTGGCGCTTTAAATCGCCAGATAAACTGCGCCAACAGGTTGATAGCCGAGCACAAGCTATTGCAGCTAAAAATGGTTTTGCTGTTGAAGAAGTTAAAAGTCGTCTGTTGCAATCAATAGATAGCTTTAAGCAACACTCTAAATTGCCTTTTATCAACCTACGGAGCTTGTCGACCGACAGTATGCTAAGCCCTGCAGAGCGTAGAAAGTTTTTGTTGTTTATTGAGTGCCAAAAAACAACAAAACCAAGTGATAACACACCACTGCTGACATGTTATGGGCTCAGCCGACGCTCAGAAGCCCAGCAAGTTGCGGTGCCGTGGTTTTAAGGCTGCTTGATGCTTTAAAAAACCTTTTGTTTTTGCTCTTTAAAAATCGATATATAGATCAGTAAGTTGCAATAGGTCGATTTTCATAAGGTAAAATCGCTATTTTTTACTTAAGGACTTGTTGTAACTTATTTTTGTATTAGTATTTTATT # Right flank : AAAGCATTATTAGATATATGCCTCCGTCTTCCTGCCGAGGGGCAGGAGCTTATGCCAGGTTTGTGCCTACTTGCAAACAGATCTAGAAACGAGTTCAGGGTGGCTCAGTTTTAGCTCATGCTAATGCAGTCAGAAGACAATTAGGTGTTTATTGCTGCGTGATGTATCTGAGCTATTGGCTGAGGCTAAAACATACCAGCGCAGAGTGCTATCATTTCACCATCATATTCACGGCCATCACGACCAGCAGTACAGCAAAAATCTTCTTGATGGTTGTAACGGGTAGGAGGTGTGTGGCTTTTGCACCCAAAGGAGCGGTAAACCAAGAGGTGCAAACAATGCCGGCAAGGGCGGGTAAATAAACAAAGCCGGCAAAACCGTCTGATAAAGCAAACTGAGTGCTGCCCGAGCTGATGTAGCCAATAGTGCCAAATAGGGCTATCACGATGCCACATGCAGAGGCGCAGCCGATGGCTTTTTTCATATCGATTGAAAAAAAC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACCGCCACACAGGCGGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACCGCCACACAGGCGGCTTAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.90,-8.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //