Array 1 91102-91918 **** Predicted by CRISPRDetect 2.4 *** >NZ_NGJS01000003.1 Vagococcus vulneris strain SS1995 3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 91102 36 100.0 30 .................................... TTTAAACATTTTGACTTGTACTTTGGTTTT 91168 36 100.0 30 .................................... GGTTAGTGCAAGAGAATTACATAAGTCATT 91234 36 100.0 30 .................................... TCCTAAAGTAATTATTGTCACCGGTACACA 91300 36 100.0 30 .................................... ATTTGGTGATTATACCAGTCTTAAGTCCTT 91366 36 100.0 30 .................................... GGATTGGAATGATACCAAGCATCAACATTA 91432 36 100.0 30 .................................... ACTCTCTTTTATTATTCCTGCTATATCAGT 91498 36 100.0 30 .................................... CATTTTCTTTGATATACTTTTGAAGTGATT 91564 36 100.0 30 .................................... TTTGATTATTATGGAAATGACAAACCCGAC 91630 36 100.0 30 .................................... TGCAGCGGAACAGATTTACAAAGAAGAAGA 91696 36 100.0 30 .................................... GCAGAATGATGAGCGAACATGCCCACATTG 91762 36 100.0 30 .................................... CTGGCTATTTGTATTTCATGTACAATAGCA 91828 36 91.7 19 ..........................T...T..C.. CGTTAACGGCGGAAATTTA Deletion [91883] 91883 36 83.3 0 .........T....T....C........C.....GT | ========== ====== ====== ====== ==================================== ============================== ================== 13 36 98.1 29 GTTTTAGAGCTATGCTGTTTTGAATGCTTCCAAAAC # Left flank : AAAACTAAAATAGAATTATTAGCTAATCAAATTACAAATTTAATAGGATTGGAATTGTTAAATCATGAGTTGGATTTAGAATTTGATGAAATAACAATTTTAGAGTTGTTTAAAGCTTTGGGTATCAAAGTCGAGACAGAAAATCACTCATTATTTGAAAAAATAATGGAAATAGTCCAAATATTTAAATATCTATCAAAAAAAAGCCTATTAATCTTTGTTAATGTGTGTGGATATTTTAGTTCTGATGAATTACAAGAAATAAATAATTATATTTCATTATCAAATTGTGATGTCTTATTTCTAGAACATTATAAAGTACCAGGAGTTAAACAATATATAATTGATGAAGATTTTTTTATAATTAATTAAAATATGTTATTCTATATGAGACAGTTCTTTGAAAAGTGAATAGATTTAAATAGTAAAAAAGAAGCATTCATGACAAGATTCTTGCTATGGATGAATAGCGCGATTACGGGATTTCGAATTTCTACGAG # Right flank : TTTATTGCCTTTATTAAATCTACTATATAAGAATATGATATTAAGGAGACAGCAATTACCAATGAAATTATTGCCTTAAAAGAGTAGTGCATACTTGTTCATAAAACACCTTTTTTTACACTGAAACAAAAAGTATTAAGGATATTAATAAAGCTATTAATACTAATTAAAAAAATTATGGGCGATAGTACTTAAGTGTGTCAGTCATTGTTTGAATGACATAGTCTTGAACATGTTTTGGCGAAATAACTTTGACATTGTTCCTTGACTGACTAGCCACATTTTAATGCCGTACCCATCATTTTATGGATATTTGTTTTAATAAAATTGAAGTATCTTGATAACAGGGTGTGGGAGTAAACCTGAAGAGACTTCCAACAGGTATGAGGTCAATAAAGAGTGTTCCATGAATGATTTGCCTATTTTAATTGAAGTGAATTTAGAAATGGCTACGGCTACATTTACTATTAAGTATTATGATGTTAAAAACACAGGATTTT # Questionable array : NO Score: 6.08 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:-0.07, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTATGCTGTTTTGAATGCTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTATGCTGTTTTGAATGCTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.20,-0.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //