Array 1 56411-61749 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACDUV010000006.1 Anoxybacillus kamchatkensis strain DSM 14988 Ga0415319_06, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ========================================= ================== 56411 29 100.0 35 ............................. CGAAGTTCTTCATCTGTCTCTTTATTTCTGCCTAC 56475 29 100.0 38 ............................. TGACCCCTTCCTCTTCAAACGGCTCTGGACTTTCAATA 56542 29 100.0 35 ............................. CTTCACATTCAGTTCTTTCTTCATGTATTGAAAAA 56606 29 100.0 39 ............................. ACACGACAAAAACAGCGACAAATTGGGGGATTAACATAC 56674 29 100.0 36 ............................. GGGTACGTGATTATGAAGCGTTCAAGGGTGAATTAT 56739 29 100.0 38 ............................. TTCAAAACGAATGGCATCTCCGTCGAAATCCTTGCTAC 56806 29 100.0 39 ............................. TCATTTCGTTTTTGCGAAATCGAAAAAACGAAATTGCGA 56874 29 100.0 41 ............................. TTGTCTTGTAGAAAGTCTTGTCCAAAAAACAAAAACCACCG 56944 29 100.0 40 ............................. TGGGAAGCGGTGTTTGTTGAGGACGGTAACGAAATTACGC 57013 29 100.0 39 ............................. AAAAATTTTCTTATATCATCTTTGTTTAAATGCGATAAT 57081 29 100.0 36 ............................. ATCCTTGCGTGACCTCTTGTTGTATCGTATATACGA 57146 29 100.0 38 ............................. CCGCTTACGAAACGAACATCATAAGCGAGATCGAAAAA 57213 29 100.0 40 ............................. CAGCTTGTGGATAAGTAGCGTATTATAACATGGACGGTTA 57282 29 100.0 39 ............................. CATCGAACGAGGAGCAAGCGCATGTCCGTCCGCACCATA 57350 29 100.0 36 ............................. AAGAAAGTAAACGGAAAAATAGAGAAGATGTTTTGC 57415 29 100.0 39 ............................. GTGTGCCGAATTTATCTTGTAACGCTTTTTTGATTACAT 57483 29 100.0 36 ............................. TGAGGAAGTTGTCAGACTATTCGGTTCATTGCACGA 57548 29 100.0 36 ............................. CTCCAAGAACAGAAGCAAAACGATTAGCTTCATAAG 57613 29 100.0 37 ............................. GCGCCATTTGTTATATTTTTCGGAAAAAATTATTGAC 57679 29 100.0 37 ............................. TTGCCTAAACTTTTTAAACTCATAGTTTGCCATTTTT 57745 29 100.0 37 ............................. TAAAAATAGCGAGCTCTCTTAATAAACTTCTTGAAAT 57811 29 100.0 38 ............................. AGATGTACTCATAATCCAAGTAAATTTCAATATGGTCA 57878 29 100.0 38 ............................. CAGGTTACTTATATCATAGCATAGTATTGTGGATAAGT 57945 29 100.0 38 ............................. AAAATGAAAGAAGTGCCTTTGTTGATACTAGACGACAT 58012 29 100.0 36 ............................. TTACATTAACCGTAATCAAGGTAACGTAGGTTTGTT 58077 29 100.0 39 ............................. TTGTTTTACAACAAGATGTGTAAAAATTCCATGAAGCCG 58145 29 100.0 39 ............................. AACGTTGTCGGGTTCTGTGTTCCGTAGTCGCATGACACA 58213 29 100.0 37 ............................. CCTCATTCAAATGAGAAACCAAAACCGTCAACAATGA 58279 29 100.0 39 ............................. ATGCTTTTCCCGACTTCGAGTAGGATACTCATAATTCCT 58347 29 100.0 36 ............................. ATTTTTGAAGTTTTTCGGAAGTTTTCGTACTTTCAT 58412 29 100.0 37 ............................. CCGGTTCATCGACTCAGTGGCTCGTAACCCGACCAAA 58478 29 100.0 38 ............................. ACGAACCATATGCCGTTTTTCGCTAACTCGAGCGGGAA 58545 29 100.0 36 ............................. AAAACATCCGTTCCGCGCATTTTGGCTGCAATCGAA 58610 29 100.0 37 ............................. CTTTTTCGCGTCATCATTCTCATTGACGAACTTTTGC 58676 29 100.0 38 ............................. TTGAACTTAAAGGTATTGAAGCGATTGATTATATTTCT 58743 29 100.0 38 ............................. TTGCCGCTGGCGTTCGAGTGGCAAATATCGAATTGTCA 58810 29 100.0 38 ............................. AAAGTTCAGTAAGTGCGTTCAAGTGTTTCTCGTAGCCT 58877 29 100.0 36 ............................. ATACACAACAAACGATGACCGAGTCGGTGCGATGAA 58942 29 100.0 35 ............................. AAAGGTCTAATCATCGAGGGAACAGATTTCATCAT 59006 29 100.0 36 ............................. AATGTAGCGGAGAAATGTTACCGTCCATCAGATACG 59071 29 100.0 39 ............................. GAACGGGAGCGAAAACAACAATGGGAGCTGGGGTGACGA 59139 29 100.0 37 ............................. AAGAAAAGCATTTCTAAGGTCGCGCACGTCCTGTAAG 59205 29 100.0 39 ............................. GAGTAAACTGTATTAGCCAACAACCTTAAGCAACTTATA 59273 29 100.0 36 ............................. TTTTGTTTACCTGTCAGAATTTCGATTGCGCGACTC 59338 29 100.0 36 ............................. TAGTAATCGGTTTTTAAATATTGTGTATTTTTTAGT 59403 29 100.0 35 ............................. CAGCTGCGTCCCTGGCGCCATGTACTCTACCGCAT 59467 29 100.0 35 ............................. CTTTTTGATTCATGTCGATTTGTTGTTCTTGTTTG 59531 29 100.0 35 ............................. AGTGTTGACGTGATCGACGAAACAGCGATTCCGAT 59595 29 100.0 37 ............................. AGGATCAACAATCCACCAATGACGATGTGCATGGTCT 59661 29 100.0 38 ............................. ATATCTCTACCTCTATGGGCTAAAATAAATAAATTTTT 59728 29 100.0 36 ............................. TGAGAGAAAAAACGCAGAATAAACCGACGCAACCGC 59793 29 100.0 35 ............................. AAACGTCGCTTCAACAGTGTTAGAAAATGCTTCGA 59857 29 100.0 37 ............................. TAACTATTATATCGCATTCCTTCTTGCTTTTCATACA 59923 29 100.0 39 ............................. TGAGATTAAAAGTAAAAGAAATCAAAGGCGACACTCATC 59991 29 100.0 37 ............................. CCGCTAAAAAGTAGGTGAAATGCTTTGAGTGAAACTT 60057 29 100.0 38 ............................. TAAAGCATAGTACATCTTCCTCCTTCTCAACCTTTTGT 60124 29 100.0 36 ............................. CATGTCAGGTCCGCTTGGTCCGCGGCGTTTGTTTCT 60189 29 100.0 36 ............................. CTTGTGTTACGCCCGTTAACTGCAGGCGAAGCTGAT 60254 29 100.0 41 ............................. TTGACATAGCCCGATCGCAATGCTGTCCCACACATGGTCGG 60324 29 100.0 38 ............................. CGTTGCGATTAGAATAATTTTCTTGACGGACTATTTTT 60391 29 100.0 39 ............................. CAAGAAAAGAAAAAGCTAGTGCAACTACTGTATTGGACA 60459 29 100.0 38 ............................. TTGTTTTTGCGGCGTTGAAAGGGGGTGTACAATGATGG 60526 29 100.0 34 ............................. TAAAGCATAGTACATCTTCCTCCTTCTCAACCTT 60589 29 100.0 37 ............................. AGCCATGCCTCGTTACCTTTTTTTGCGTGTCAAAATG 60655 29 100.0 40 ............................. ATTAGTCAGTCTGATATTCCAGACGTTTCTAATGTTCCTT 60724 29 100.0 37 ............................. AAAGAAACACTTGGCTTTCAAGGGGACAGTCAGTTAC 60790 29 100.0 37 ............................. AGCCATGCCTCGTTACCTTTTTTTGCGTGTCAAAATG 60856 29 100.0 36 ............................. GCGTGAATCCGAAACGAACGCAAGCACTTGCGCATC 60921 29 100.0 38 ............................. TGTGATGAGGAGGTGAGGACATGGACAAGTTGGTGAAG 60988 29 100.0 39 ............................. TTGCGAAAAGAGATCTGTTTCGTTTCTACTGACGGGCGT 61056 29 100.0 39 ............................. ATAAGAACGTTAGACCATTCATGAAAGTGTTGAATCAAG 61124 29 100.0 35 ............................. CACCCACAACTTTCTCAGCTAATAAATTCCCATAA 61188 29 100.0 39 ............................. AAGAAGCCGACTTTTAAGTTAGATGTCACTTCTAAAATT 61256 29 100.0 38 ............................. ATGTAGTGGAATGATTGATGGAGTAGAAGCGATTAAAC 61323 29 100.0 39 ............................. AAGAAGCCGACTTTTAAGTTAGATGTCACTTCTAAAATT 61391 29 100.0 38 ............................. ATGTAGTGGAATGATTGATGGAGTAGAAGCGATTAAAC 61458 29 100.0 36 ............................. TAGAGTAAGCCTATTCTTTGAGTAGAGCAGGATGAG 61523 29 100.0 40 ............................. CCGAATTAGGCGAAAAATTTAGGCGTTGGGGGTTTTTAAA 61592 29 100.0 36 ............................. CGTATCTATTATGTTGCACTTTAAGTCAACATTCAA 61657 29 100.0 35 ............................. GTAAGGCGCTAGCGTTCTCAACGCTCCAGCAAGCT 61721 29 72.4 0 .........A.........AA..A.CCCC | ========== ====== ====== ====== ============================= ========================================= ================== 81 29 99.7 37 GTTTTATCTGAACGTAGTGGGATGTAAAG # Left flank : ACATTTCATTGGCGATGAGCCTTATAAACCATTGAAAGCATGGTGGTAGTTATGTTTGTAATTATTACGTACGATGTTGGGGAAAAGCGCGTAAATAAAGTGTGTAAAAAGTTAAGAGAGTACTTAACATGGACACAGAACTCTGTGTTCGAGGGGGAAATTACTAAAAGTTTGTTAATGAAATGCTTAAACGAAATCGATCAAATTATCGATGAAGATGAGGATTCCATTTATATTTACGAAGTGGCTAATCCGAAGAACATCAAGAAGCAAGTATTTGGACAGGAGAAAAACTTTGATGAACTTTTTCTTTAACATTTGCAGTGAACCTCTAATTTGAAAAAACGGAAAAAATGCTTGATATATCAACAAGAAATGCGGTAGTTTTAGGATAAGAAAAAAACACGACTGACGCTTCACTGCAAAAAGTAGAAACTTGTCATATCAACCATTTTCCAAAATCGTTGATATGACAGCACTTTGTGTTTTTAGATTTGAGG # Right flank : CCTTTTTCACTTCATTTTCACCATTCACTCGTACACTTACGGTATACAGTACATGATATGGTGAATCAGGGGGGATATGTGTTGAAGAAAAACATCGTAAAAATGATATTGGATATTTCGTTGGCGATTACGTTTGTGTTGTTAATGAATCCGAGAGTGTTTAACGGATTGCCGTTTCATGAAGTGGCAGGTCTAGTGATTGGTGTGGCTGTTTTGATCCATATTGGTTTAAACTACAAATGGGTTGTCAATACGGTGAAAAACATATTCAATCGTTCGCTTTCGGGGAAGGCGAGATTTGGTTTTTTATTAAATGTGTTGTTGCTTGTTTCGATGGCAGCTATTATCGTGACCGGTATTCTTATTTCGAAAGTTGTATTTCCGCATTTTTCAGGTGGGGAAAATCATGCGCTAAGGGAGCTTCATGATATTTTTTCGAAAGTGACGCTTGTGCTTGTCGGTGTCCATATTGCATTACATTGGCAATGGATCATGGGTGT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATCTGAACGTAGTGGGATGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.07%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.50,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 1 35163-36053 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACDUV010000008.1 Anoxybacillus kamchatkensis strain DSM 14988 Ga0415319_08, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 35163 36 100.0 30 .................................... GGGCGTATAAGTGATTTAGAAATGGATTTA 35229 36 100.0 30 .................................... AAACTACTCAAATACGAGATAAAACTACCT 35295 36 100.0 30 .................................... CACATGTATGACGAGCAGGAGGTTATAATG 35361 36 100.0 30 .................................... TCCCGTTCCAGCAAAATGACCGCCTAGGCT 35427 36 100.0 29 .................................... GAAAAAGCGAGATTAAAGTTAAGTATATT 35492 36 100.0 30 .................................... TTCAAATGAAACGATAGCGTGTAATATTGA 35558 36 100.0 30 .................................... AAATAATGATACGATTTACATAAGAAAAAG 35624 36 100.0 29 .................................... TTGACGCTGGGGGGTCGCCCCTGCTAGCA 35689 36 100.0 30 .................................... TCCTTTTCCGCACGATCACGCAATATTGGA 35755 36 100.0 30 .................................... ATCAGGAAATGACAAAGTTGGTTGCTGAAA 35821 36 100.0 29 .................................... TTAACGAAGGTGCTTCGAGGTGAAGAAAC 35886 36 100.0 30 .................................... CTCATTTGTCCGAATACGAACAGGATTTCG 35952 36 100.0 30 .................................... GCGCGGACGCAAGGCGTGCCTTGTTGCATA 36018 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 14 36 100.0 30 GTCATAGTTCCCCTGAGGTTGTTGCTGTGGTATGAT # Left flank : CTTGCCCATTCTCACGTTTGAAACGATTGATGAAGCCATTCAAATGATCAACGACTACGAAAAGCCGCTTGCGCTTTATTTGTTTACAGAAGATCGCGACGTACAACAACAAATATTACAGCAAGTTCATTTCGGTGGGGGATGTATAAACGATACGGTTATGCATGTTGCCAATCCTCATTTACCGTTTGGTGGTGTTGGACAAAGTGGCATCGGTGCATATCACGGAAAAGCAAGCTTTGATGCGTTCACTCACTACAAGAGCGTGTTAAAACAAACAACGAAATTCGATATCCCGTTGCGCTATCCAAACTTTCCAAATGCGCTCAAGTGGGTACGGAAGTTGTTGAAATAAAGAGTGTTCCTTAAGGGGCACTTTTTGTTTTAGTGGAAAGTGCATTGGTTATAGTTGAATTTAGTAGTAGGCTGCAATTATATGAGGATGTCTGAGGTTGTTGCTGTGGTATGATGCAGACAGGCGTTGTAAGCGAAGGTTTTTC # Right flank : TACGTGTGTCAAAAAGCCTGTAATATCAACGGTTACAGGCTTTTTGATCATTTTAAAAAGGCTGAGAAGATGGAAAAAAGATTTGTCCTCCATCTGTTTTTTAAAAAAGTGAAAGTTGTGTTGCCGTAATTGTTTTTTCTCTTGGAGTAGGTTCTCCCAAAAGAAATTGCATTTTTGCATATTGTTTTTCCGTGACAATCATCGCTCGTATTGATCCTTTTGGTGGTAGGTTTCTTTTTAGCCTATTAAGATGTTTATCAGCAGATTCATGCCCATTGCAGATCCGACTATACACAGAGAATTGTAACATATCATACCCTTCGTTTAATAAAAATGTACGGAATTGTCTGTAGTGCCGTTTCTCCTGCTTAGTAACGACAGGTAGGTCAAAAAACACAAGCAATCTCATAAATTTACTCATAGTTGTGTACTTGGATAGGGAGAAGTTCCGGCAATTTTAAAAATGAAGGGTTTTCGTTTCGACTAGCTGTTACGAAGCT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCATAGTTCCCCTGAGGTTGTTGCTGTGGTATGAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.30,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [51.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0.27 Confidence: LOW] # Array family : NA //