Array 1 139380-141582 **** Predicted by CRISPRDetect 2.4 *** >NZ_FTMF01000003.1 Chryseobacterium indoltheticum strain ATCC 27950, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 139380 47 87.2 30 C.AT.TCG....................................... TAAGAGTAGCAGGCAAAGTAATATTTTACG 139457 47 100.0 30 ............................................... AATTTTAAACACCGACATTCCAGCTGACTT 139534 47 100.0 30 ............................................... TATTGAAAATATGCCTAGAGGCGCTACTTT 139611 47 100.0 30 ............................................... ATTATCTTCAACGACAAGCACCCATATTTC 139688 47 100.0 30 ............................................... TATCTTATTGTTTGTAATTATAGTTTCATA 139765 47 100.0 30 ............................................... CGTAAAGATTATGAAGCCCCAGGAGGGTTA 139842 47 100.0 30 ............................................... CTTCTGACAATCTTTGTAAAGCAAGCGCTT 139919 47 100.0 30 ............................................... CCGCCGTAGATAATTACAAAACCTTCACCC 139996 47 100.0 30 ............................................... TTTTTGAATAATTCAAACAACAGAAGCAAT 140073 47 100.0 30 ............................................... AAAGGTTGAAACTATCAAGTGGGTAATTGG 140150 47 100.0 30 ............................................... ATTTATGGAATTTCTGTATTTAAGATGTTT 140227 47 100.0 30 ............................................... TACGACGGCATGTCGGGAATGCTGGCGAAC 140304 47 100.0 30 ............................................... GCGATTCCTTTATCCTGCACCCATTGTTTA 140381 47 100.0 30 ............................................... AAATTAAAGTAGTACAATGTTTTCTTCTGT 140458 47 100.0 30 ............................................... CTTTGTTTTTATAAGTAGTAGACAGACCAT 140535 47 100.0 30 ............................................... GATGGAACAAATATTCTTCAATGTAATTTT 140612 47 100.0 30 ............................................... ATTGCAGACCGATTTAACACCTATGTTTTC 140689 47 100.0 30 ............................................... GCAAGAGGAACTGCATCTGAAGGCAATATA 140766 47 100.0 30 ............................................... TGGGGTCGATGGATATGTAGACAGAAAGTC 140843 47 100.0 30 ............................................... TAACGTCGCCTTATATACCGTATGGATCCT 140920 47 100.0 30 ............................................... TTTAAGTAACTTAATACGTCCAATACTTTC 140997 47 100.0 30 ............................................... CTGTGACTTATATCTCCATACTCTCCCACT 141074 47 100.0 30 ............................................... AAACTGATCTCTTTTTTATTATCCATGGCT 141151 47 100.0 30 ............................................... CTAATTCCGAAAGGTAAGTACTCATAGGCA 141228 47 100.0 30 ............................................... CCTGTTATTTTAGTTAAACTGTGAACTGTC 141305 47 100.0 30 ............................................... TTGGAGATTCCAAACCATCTGCGGTTATTT 141382 47 100.0 30 ............................................... TTCAAAATAAGTCTTCCCAGTGTAGTGCGA 141459 47 100.0 30 ............................................... AAAAGATGGCTCAGGAAAATAATCTATTGA 141536 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 29 47 99.6 30 GTTGTGAATTGCTTTCATTTTTGAGTATCTTTGAGATATAACACAAC # Left flank : GGACTAATAATATGAGCCGTCCAACCCTGTTGTTCCAAATGTTCTTTTGGAGATTTCAATTCACTTTCCTCAAATCCGTTTGTTGCTAGAATTGCAATTTTCTTTGACATAATAATATTTTTTGGTGTTATGATAGATATGTAAGAAAATATGATGCCTACTCCGATTATTGTGGTATTAAAAAATGTTAAAATTTATTTTAGAATTCTTCATTATTCCAAATATAATTAGCTGAACAAAAATTACGATAAGAAGTTTAAGAATAAAAGATTTTTTTGATGTTTTATGTCTAAAAATCATCATCGCTAACAATGCTCCCAAAGTACCTCCTAAAAAAGTCAAACTCAGAAGAAATAGTTCTGAAACTCTTCTTTTGCTTTTTTTGGCATACCATTTATCTGCTCCGAAAACTATAAAAGTCAAAATATTTGACACCACAAGAAAGTAAATCATTCGCAAAAATAGGAATATCTTTTATGAATATTCTTTGGGATGTGATA # Right flank : CCTCAAAATTTAACCCATTGTTATTCAGTGGGTTTTGTTGTTTTTTAGGATTTGAAATTTAGAATAATTCGAGTTGTTGGAAGGTGGGCGGCGGTTCTTCTTTATTTCTGGAAAAGAATATTTCTATGTCGCCAAATTGCTTATCGGTAATACACATGATGGCTACTTTTCCTGCCTTTGGAAGATTAAACTTCGTGCGCTTAATGTGCACCTCAGCATTTTCGCGACTTGGGCAATGGCGAACATACATGGAAAATTGAAATAATGTAAAACCATCATCAATTAGGCCTTTACGAAAGCGGTTGGCATCTTTCATATTGGCTTTGGTCTCCGTTGGTAAGTCGTATAATACTAAAACCCACATAATTCTGTAAGCGTTAAACCTTTCGGCATTCATTTTTCATGGTTTTGTTTTGCGGTATAATGGTTGCAGCCCGACTTGAGCGGAAATCCTTTTTTGCATGCTCTCAAGTACTATTTAATGTGAAATTGTCTGCAAA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCATTTTTGAGTATCTTTGAGATATAACACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.21%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCATTTTTGAGTATCTTTGAGATATAACACAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.50,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.41 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //