Array 1 213660-215014 **** Predicted by CRISPRDetect 2.4 *** >NZ_SCMB01000004.1 Lactobacillus kimbladii strain Dan47 NODE_4_length_246846_cov_20.0456_ID_988, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 213660 36 100.0 30 .................................... GTTACTTAAAAAGGCATGGGTGTAAGATAA 213726 36 100.0 30 .................................... GCAATTTTTACGTGGGCGAATTGCATAGCA 213792 36 100.0 30 .................................... TCTATATAATAGCATAATGTATCTACATTG 213858 36 100.0 30 .................................... CCCTGACAGCCAAGACAATGACACAAGCAA 213924 36 100.0 30 .................................... AACATTCAGCGCTTGGCATCAATTGGCAAC 213990 36 100.0 30 .................................... AACATTCAGCGCTTGGCATCAATTGGCAAC 214056 36 100.0 30 .................................... GAAAATAATTATAATAAGGGCGCAATGCAG 214122 36 100.0 30 .................................... CTGATAAGGAGTTCTTTGCCTTACCTGATA 214188 36 100.0 30 .................................... GGTGGTATACGTTATGTGGTAGATGAATAT 214254 36 100.0 30 .................................... AGCTAGTAACAGTTAAGTCTTCAACGTCAA 214320 36 100.0 30 .................................... TAAATTAAAAACGGTTCCTGTTGTCGTTGC 214386 36 100.0 30 .................................... AATTGCTGATGACATTAGCGACCACTTATA 214452 36 100.0 30 .................................... ATCCCGGCATTCATTATTACAACAGTGAAA 214518 36 100.0 30 .................................... AAATGATAATGAAAAATTGGCGCTTAAGTA 214584 36 100.0 30 .................................... CGGCAACACGTCAACAGAGAAGAACGGCAA 214650 36 100.0 30 .................................... GCTACAGAACAATGGCAAAGTTCCATATAG 214716 36 100.0 30 .................................... CCACAATAAAGTATAAGAATATTACTAGGT 214782 36 100.0 30 .................................... CGGCAACACGTAAGCAACGTTTAAGGGCTA 214848 36 100.0 30 .................................... TATGAAGAACTTGGATAGGTATGTTATCAG 214914 36 100.0 29 .................................... AAAAAAACATGTACCACCACACTGTTGTA 214979 36 88.9 0 ........CA.............C..........G. | ========== ====== ====== ====== ==================================== ============================== ================== 21 36 99.5 30 GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC # Left flank : TGTGGAGATATTACTAAAAAGTATATGCCTCATATTGTAAATAGTTACCTAAAAAATTTAGACGAAGAAAATCGTAATAAGGTGATGAAGTCTTTTTATAATCTAGAGTCAAACTTGCAGGACTCACTTTTACTTGAAGATTTACCCTTAGCAATTAATTTTGATGAAGACTTAAAAAAATTGCTTAAATTTACAGAAATTCATTTAGATAAATCAATGTTGCTCAATCCATATGGTATAATAGAAACAGTTTTAAAAATTCACGAAACGTGTAATTTAAAATCAGTTCCTGTTATTTGTAATGTAGCTCATTACTTAGAAGAACGGGAGTGGCAAGAATTAGCTAGTCTTGTCACAGAAATGAATTTAATTTTGGTTGTAATTGAATTCACGACAAAAGAAAATTTGGCAATTTCTAAAGACATACCTTTTTACTATATTGATAAGGATCTAATCGATTGGTACTAGCAACAATATTAAAATCAGATTATAAAATATCG # Right flank : CATAATTAATTGGGTTATGGAAAGCAAAATTTCAAATGAAAAAGTCATTCAAATTAAAGAAATGAGGCAACTCTAGAGCGGTTGTTATCCATAGAAAAATGCTGAAAGAATAAACGCAGATCAGCTATTTACAGAGTTGCAATAGACTCTAATGAGGATAAGCAAACTATAACGATAAAAAAGGTTGAAGGCTGAATATAATATTTTGACTAAAGCAATTACAGAATATAATCCGCTGCCTATAACAAAGAAAAAATGAAAGGCCTGATCCGGAGAGAATATTGGGTTCAAGCCCTAAAGAAATTATATTGACTTTTGGTACTTAGTACTTTAATATTTTAAGAAATTGACACTAATTAAAGAAAGGCTGCTATTTGTTCACATGCAAAATATACTAAAAAGTAAAAACAACAAACTGTATATTTTGTCAGTGATCACCGATAACTTGGGCAGCTCTTTAATGTCATTTGCGTTGCCGTTGATGGTACTTGATATCACTA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: F [matched GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.90,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //