Array 1 942328-944188 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP056244.1 Citrobacter freundii strain RHBSTW-00923 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 942328 29 100.0 32 ............................. TACTTTGGAAAAATGCTGTCCAGCGTGGTGGG 942389 29 100.0 32 ............................. GCGCATTGGGGAACACTATTGGGAAAGTAACC 942450 29 100.0 32 ............................. GAGCTTTTAAAATCCTATCTTGATGATGTGTT 942511 29 100.0 32 ............................. GTTCCCCACTGGAGTGGGGCGGGAGGGCGCTG 942572 29 100.0 32 ............................. GCATGCCAATAAGCAGGGGTTACGCGGTTGAT 942633 29 100.0 32 ............................. CCACGCGGCGCAAGTCGGTTTGTTTCCCTAAC 942694 29 100.0 32 ............................. GGAATCCGGCGCGGCGTCATTATTTGCAAAAA 942755 29 100.0 32 ............................. TCACAGGACATATTCCCCGGTTTCCATTAAGC 942816 29 100.0 32 ............................. ATTAGAGACACCGGAACGGCCTTGCTACTGGT 942877 29 100.0 32 ............................. ATTGCCTCAATATGTTGAGCCGTAGGACGGCG 942938 29 100.0 32 ............................. CGATTAACAACGCGTGGGATAGCGTTAATGGC 942999 29 100.0 32 ............................. ATTGCATGTTTCATAGTAGTTCCCCCGGCTGC 943060 29 100.0 32 ............................. TTGGAAATAAAATCCTTAACAGCCCTCACCGA 943121 29 100.0 32 ............................. ACCTCTTGACGCTTGCCGCACTGGAAGAAAAT 943182 29 100.0 32 ............................. ACACCCGCTCATCAAATAGCGCCTCACACTTC 943243 29 96.6 33 ............................T GACGGATTTAAGTGCTGTAACAGTATCTTTCCC 943305 29 100.0 32 ............................. TGATACCCGCCCCAATTGCGCTTGCACTGCTC 943366 29 100.0 32 ............................. TTGTACCCGGTCAGCGATAAAACCTTTTGACG 943427 29 100.0 32 ............................. GCAACAGGAAAACGCAATCATGCTCATCGGCT 943488 29 100.0 32 ............................. ATTCTGTTTTTCACGCCCGCCGCTAAGGTCTG 943549 29 100.0 32 ............................. CGCGAATTGGCCCTATGGCTGACGGGGTTGTA 943610 29 100.0 32 ............................. GGTGAATTTGATCCGCTTGACGATAACGATAA 943671 29 100.0 32 ............................. TCGAGGTGCTTTACGCGTGGCTTGACCCATCC 943732 29 100.0 32 ............................. TCGTAGCGCTCATTTGTCGCCGTATCCAGTAC 943793 29 100.0 32 ............................. GGTTGCTGGTGGATGATGACACGTTTCATGAG 943854 29 100.0 32 ............................. ATTAGAGACACCGGAACGGCCTTGCTACTGGT 943915 29 100.0 32 ............................. TATCAAGATTATCTGTGCGATTTGCGCGATAT 943976 29 100.0 32 ............................. CGCCATAATAGCCACTCGGAAGGGTGGCTTTT 944037 29 100.0 32 ............................. GTCATCACTCAGCGTCAAACACTCTGCGAGTT 944098 29 100.0 32 ............................. CTTGATATCGGCTGCGTTACCGGCCTCAGCAT 944159 29 96.6 0 ...........................A. | A [944179] ========== ====== ====== ====== ============================= ================================= ================== 31 29 99.8 32 GTGTTCCCCGCGTCAGCGGGGATAAACCG # Left flank : GTGCTGGCAGCCGGTGAGATCGAACCGCCACAGCCCGCGCCAGATATGCTACCACCCGCTATACCCGAGCCGCAGTTGCTGGGTGATGGCGGACATCGGGGGCATGGCTGATGAGTATGGTGGTGGTGGTGACGGAAAATGTACCGCCGCGTCTGCGAGGGCGTCTTGCGATTTGGTTACTGGAAATTCGAGCCGGTGTGTACGTCGGCGATATTTCAAAACGTGTGCGAGAAATGGTCTGGCAGCAGATTACACAATTGGGTGGTGCTGGAAACGTTGTGATGGCCTGGGCTACGAATACGGAGTCCGGTTTTGAGTTTCAAACCTGGGGTGAGAATCGACGTATTCCGGTGGATTTGGATGGGCTCAGATTGGTTTCCTTTCTTCCTGTTGAAAATCAGTAGGTTGTCTGTTCTTTAATAAAATGGATTTGTTAATTATAAGTTGGTAGGTTGTTGCTTGCTAAAAAATATATTAGAAAACAGTTATATATATTTAGA # Right flank : GCGCAACATTCAATAATTTGGTTTCATAAAAATTATGAGTTTTTTTCAGCCTTTGCCAGCTCTTTGACCAGTGGCAGCATAATGCGTACCACGTCGCGACTGCGGTGCTCAATACGGCCGGGTAACGCTTTATCAATATGCTGCTGGTTATCCAGTCGAACGTCGTGCCAGCTGTTGCCTGCAGGGAATGAGGCGGTTTTGGCTCGCTGCTGATAGCCGTCTTTATTACCCAGATTCCAGTTGGTGGCTTCGACGGAGAGCACGGCAATCCCCGCTTTGTCGAACACCTCCGCATCGTTACAACATCCAGTGCCTTTCGGGTAGTTCTTGTTCAGACCGGGATTGGTGCTGGCGGTGATGCCGCGACTGCGTGCAATAGCCAGCGCCCGGTCGCGCGTGAGCTTACGAACCGCTTCAGGTGTTTTTTGCCCGCTGTTGAAATAGAGCTTATCGCCGACGATCAGGTTATCGAGATTAATCACCAGCAGCGTATTTTTCTT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGTCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGTCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //