Array 1 62-1946 **** Predicted by CRISPRDetect 2.4 *** >NZ_WHOH01000003.1 Lentibacillus sp. JNUCC-1 contig00003, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =================================== ================== 62 36 100.0 30 .................................... TCTTGATCTCGTTTAACTCACGCTTGAGAT 128 36 100.0 29 .................................... CTTTCATAGATCCCACTCGTCCTTATAAT 193 36 100.0 30 .................................... CAAGGATGAAGGTTATACTTGGGAAGAAAT 259 36 100.0 30 .................................... GGGCGCATTGTTCAGACGCTTAAAAGGTTG 325 36 100.0 30 .................................... CCCATTGAGCGCCACCGATTGGCTTTGCTT 391 36 100.0 30 .................................... AAATCCACGACGCACCACACGTTTTCTATT 457 36 100.0 29 .................................... CAGGCATCATGAATAATGCCTCGAATTTG 522 36 100.0 30 .................................... CTTCCCCTGATGTCTAACTATAGTATAATA 588 36 100.0 30 .................................... CAGCGGAAACTAATAACAACAGTGGATTTC 654 36 100.0 30 .................................... AGCACTAGCGGCGGCCAGTATATCAGCCAA 720 36 100.0 29 .................................... TTAACCAGTAGTATCTTTTGGACAACGTA 785 36 100.0 30 .................................... TTTTCCGCAGCAAGTCTTAACGTTTCATGA 851 36 100.0 30 .................................... TCTTGATCTCGTTTAACTCACGCTTGAGAT 917 36 100.0 29 .................................... CTTTCATAGATCCCACTCGTCCTTATAAT 982 36 100.0 30 .................................... CAAGGATGAAGGTTATACTTGGGAAGAAAT 1048 36 100.0 30 .................................... GGGCGCATTGTTCAGACGCTTAAAAGGTTG 1114 36 100.0 30 .................................... CCCATTGAGCGCCACCGATTGGCTTTGCTT 1180 36 100.0 30 .................................... AAATCCACGACGCACCACACGTTTTCTATT 1246 36 100.0 30 .................................... CAAGAACATCTTTAACTTTTAACTCATTCA 1312 36 100.0 30 .................................... AGTACCAGAGCAAGGGAAACCTTATCGGCA 1378 36 100.0 30 .................................... TATATTTGTGTTTGTAAGGTTCATAGTTTC 1444 36 100.0 30 .................................... GCGTTATTCGCTATGCGCTCAACGTACCCA 1510 36 100.0 30 .................................... CCGATAGAACTTGCCCCGTTGTCCGGTTAA 1576 36 100.0 30 .................................... TTCTTCATTGCCTTTAGCTTGATCTGACAA 1642 36 100.0 30 .................................... AAAACTTTATGAATGAAAATGGCATTGATT 1708 36 100.0 35 .................................... AGCGGCACTGCCATTCCATTCAAATTAATAAGCAT 1779 36 100.0 30 .................................... CAATCCAAGACGTTTAAGTCTAAGCAATCA 1845 36 100.0 30 .................................... ACGACAAGAAGTCATCCAGCCCGCAATCGG 1911 36 75.0 0 ..............T.G..C.T..T.TTT.....A. | ========== ====== ====== ====== ==================================== =================================== ================== 29 36 99.1 30 ATCATATCACATCAAGATTTACAGGGGAATTATGGC # Left flank : TATGATCATTGATTTACAGGGGAATTATGGCCTTCTCTTGCTCGGTTCTTGAGTTTCTTCAA # Right flank : CTGTCTTTTAGTGGTTTATTTTCGGAGGTTCTTTTATCTCATTTGCGATTCCTAAATCCTATCACTATCTAACCCCCTTCTTTACAGAGGTTTTAAGTGACATTAAATTAAACTAACTATATACTTATATATAATAATGATTTTAGTGTGAAGGGGCGATTACAAAATGATTGATATTTCGCTCTGGGAACGAGACACTAAAAGTCAGGCCTCAGGTACGCGGACAAAATACTGGTTATTGGAACCAGGAACGGATTCAGAGCATGCTGCAAAGTATCTCTTTAAAATACCTGTTGAAGGAACTGGTGGCCATTGGGCGGAATATATTGCGAGTAAAGTGGGCTCAGAACTAGGTTTTAATACGGTTGAAGTAGAATTAGCTATAAATAACGGAGTTGTGGGTACTATTTCAAAGAATTTTCGTGCCACAACTGAAGAATTTTATGAGGGTGGCGACTTATTTTTAGCACGATTTGAAGACTTTAATCGTCACTCATTAA # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCATATCACATCAAGATTTACAGGGGAATTATGGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 1 2174359-2174789 **** Predicted by CRISPRDetect 2.4 *** >NZ_WHOH01000001.1 Lentibacillus sp. JNUCC-1 contig00001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 2174359 36 100.0 30 .................................... CATGAACCTCCTTTAAAATAAAAAAGAAGC 2174425 36 100.0 30 .................................... TTACCGGATACAACTGATACAAAAAAACCG 2174491 36 100.0 30 .................................... GGATTGACTGCTTTTAAAGCCTGGATAGCC 2174557 36 100.0 29 .................................... AGTTGGTTTGTGGGCGTATTGTCCGGACT 2174622 36 100.0 30 .................................... AAGCGCTGTGTCCATGCTTTCATTTCTCCT 2174688 36 100.0 30 .................................... TGCACGAACTGTGCTATTGCTGTCGTCCAT 2174754 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 7 36 100.0 30 ATCATATCACATCAAGATTTACAGGGGAATTATGGC # Left flank : AGAACTCATTAACTTGAACGTTCACCAGTATGAGTAGATATATGCGTATCATTGTATTTTTTGATCTGCCGGTCGTTTTACCCAGAGAACGAAAAGCGTATGCCCGATTTAGAAAATTTTTGTTGAATGATGGCTATACCATGCTTCAGTACTCAGTTTACTCGAGAATTTGCAATGGCGAGGATAACGTAAGAAAGCATATGAGGCGACTCCATGAACATATTCCACCTGTAAACGGAGCAATACGTGCGATGAAAGTGACCGAACGTCAATTTGAAAACATGGATATCCTTCTAGGAACGACCACAGCTGAAGAGGAAATAGGTCCAAAAAAGGTTGATTTCTTTTGAAAAAATGCTTGCAAAATAAATTTGCAGGCGTTTTTTCTATTTACTTTGATAAAAAACTATCAAAGTGGTTAAAGAAAACGAGATATTCTTCTCTTTTTTTAAAATGAAAACCCTTGAAGTGGGGATGCTTCAAGGGTTTCAGGGCCATGT # Right flank : A # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCATATCACATCAAGATTTACAGGGGAATTATGGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [58.3-1.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA //